Olivier Colliot
Olivier Colliot - Research Director at CNRS - ARAMIS Lab at the Paris Brain Institute (CNRS/Inria/Inserm/Sorbonne Universite)
56
Documents
Identifiants chercheurs
- olivier-colliot
- ResearcherId : B-2092-2012
- 0000-0002-9836-654X
- IdRef : 085263893
- Arxiv : colliot_o_1
- ResearcherId : http://www.researcherid.com/rid/B-2092-2012
Présentation
Research Director at [CNRS](http://www.cnrs.fr/)
Head of the [ARAMIS Lab](http://www.aramislab.fr/), a joint team between [CNRS](http://www.cnrs.fr/), [Inria](http://www.inria.fr/), [Inserm](http://www.inserm.fr/) and [University Pierre and Marie Curie](http://www.upmc.fr/) at the [Paris Brain Institute (ICM)](http://www.icm-institute.org/), in co-direction with Stanley Durrleman.
Homepage: <https://www.aramislab.fr/perso/colliot/>
Email: olivier.colliot@cnrs.fr
Research Director at [CNRS](http://www.cnrs.fr/)
Head of the [ARAMIS Lab](http://www.aramislab.fr/), a joint team between [CNRS](http://www.cnrs.fr/), [Inria](http://www.inria.fr/), [Inserm](http://www.inserm.fr/) and [University Pierre and Marie Curie](http://www.upmc.fr/) at the [Paris Brain Institute (ICM)](http://www.icm-institute.org/), in co-direction with Stanley Durrleman.
Homepage: <https://www.aramislab.fr/perso/colliot/>
Email: olivier.colliot@cnrs.fr
Domaines de recherche
Intelligence artificielle [cs.AI]
Imagerie médicale
Apprentissage [cs.LG]
Traitement des images [eess.IV]
Publications
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Generating PET-derived maps of myelin content from clinical MRI using curricular discriminator training in generative adversarial networksSPIE Medical Imaging, Feb 2024, San Diego, United States
Communication dans un congrès
hal-04362506v1
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Recent advances in the open-source ClinicaDL software for reproducible neuroimaging with deep learningSPIE Medical Imaging, Feb 2024, San Diego, United States
Communication dans un congrès
hal-04419141v1
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Semi-supervised Domain Adaptation for Automatic Quality Control of FLAIR MRIs in a Clinical Data WarehouseDART 2023 - 5th MICCAI Workshop on Domain Adaptation and Representation Transfer, Oct 2023, Vancouver (BC), Canada. pp.84-93, ⟨10.1007/978-3-031-45857-6_9⟩
Communication dans un congrès
hal-04273997v1
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Unsupervised anomaly detection in 3D brain FDG PET: A benchmark of 17 VAE-based approachesDeep Generative Models workshop at the 26th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2023), Oct 2023, Vancouver, Canada
Communication dans un congrès
hal-04185304v1
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From Nipype to Pydra: a Clinica storyOHBM 2023 - Annual meeting of the Organization for Human Brain Mapping, Jul 2023, Montreal, Canada
Communication dans un congrès
hal-04278898v1
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How can data augmentation improve attribution maps for disease subtype explainability?SPIE Medical Imaging, Feb 2023, San Diego, United States
Communication dans un congrès
hal-03966737v1
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Simulation-based evaluation framework for deep learning unsupervised anomaly detection on brain FDG PETSPIE Medical Imaging, Feb 2023, San Diego, United States
Communication dans un congrès
hal-03835015v2
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MRI field strength predicts Alzheimer's disease: a case example of bias in the ADNI data setISBI 2022 - International Symposium on Biomedical Imaging, Mar 2022, Kolkata, India. ⟨10.1109/ISBI52829.2022.9761504⟩
Communication dans un congrès
hal-03542213v1
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Advances in the Clinica software platform for clinical neuroimaging studiesOHBM 2022 - Annual meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom
Communication dans un congrès
hal-03728243v1
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ClinicaDL: an open-source deep learning software for reproducible neuroimaging processingOHBM 2022 - Annual meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom
Communication dans un congrès
hal-04279014v1
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Homogenization of brain MRI from a clinical data warehouse using contrast-enhanced to non-contrast-enhanced image translation with U-Net derived modelsSPIE Medical Imaging 2022: Image Processing, Feb 2022, San Diego, United States. pp.576-582, ⟨10.1117/12.2608565⟩
Communication dans un congrès
hal-03478798v1
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Clinica: an open-source software platform for reproducible clinical neuroscience studiesMRI Together 2021 - A global workshop on Open Science and Reproducible MR Research, Dec 2021, Online, France
Communication dans un congrès
hal-03513920v1
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New longitudinal and deep learning pipelines in the Clinica software platformOHBM 2020 - Annual meeting of the Organization for Human Brain Mapping, Jun 2020, Montreal / Virtual, Canada
Communication dans un congrès
hal-02549242v1
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Visualization approach to assess the robustness of neural networks for medical image classificationSPIE Medical Imaging 2020, Feb 2020, Houston, United States. ⟨10.1117/12.2548952⟩
Communication dans un congrès
hal-02370532v3
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Predicting progression to Alzheimer’s disease from clinical and imaging data: a reproducible studyOHBM 2019 - Organization for Human Brain Mapping Annual Meeting 2019, Jun 2019, Rome, Italy
Communication dans un congrès
hal-02142315v1
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New advances in the Clinica software platform for clinical neuroimaging studiesOHBM 2019 - Annual Meeting on Organization for Human Brain Mapping, Jun 2019, Roma, Italy. ⟨10.1016/j.neuroimage.2011.09.015⟩
Communication dans un congrès
hal-02132147v2
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Deciphering the progression of PET alterations using surface-based spatiotemporal modelingOHBM 2019 - Annual meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy
Communication dans un congrès
hal-02134909v1
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Beware of feature selection bias! Example on Alzheimer's disease classification from diffusion MRI2019 OHBM Annual Meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy
Communication dans un congrès
hal-02105134v2
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Reproducible evaluation of methods for predicting progression to Alzheimer's disease from clinical and neuroimaging dataSPIE Medical Imaging 2019, Feb 2019, San Diego, United States. ⟨10.1117/12.2512430⟩
Communication dans un congrès
hal-02025880v2
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Prediction of future cognitive scores and dementia onset in Mild Cognitive Impairment patientsOHBM 2019 - Organization for Human Brain Mapping Conference, Jun 2019, Rome, Italy
Communication dans un congrès
hal-02098427v2
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How serious is data leakage in deep learning studies on Alzheimer's disease classification?2019 OHBM Annual meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy
Communication dans un congrès
hal-02105133v2
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Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible StudyOHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore
Communication dans un congrès
hal-01758206v3
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Clinica: an open source software platform for reproducible clinical neuroscience studiesAnnual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore
Communication dans un congrès
hal-01760658v1
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Three simple ideas for predicting progression to Alzheimer's disease8th International Workshop on Pattern Recognition in Neuroimaging, Jun 2018, Singapour, Singapore
Communication dans un congrès
hal-01891996v1
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Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible studyAAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States
Communication dans un congrès
hal-01758167v2
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Reproducible evaluation of Alzheimer's Disease classification from MRI and PET dataAnnual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore
Communication dans un congrès
hal-01761666v1
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A pipeline for the analysis of 18F-FDG PET data on the cortical surface and its evaluation on ADNIAnnual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore
Communication dans un congrès
hal-01757646v1
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Individual Analysis of Molecular Brain Imaging Data Through Automatic Identification of Abnormality PatternsComputational Methods for Molecular Imaging - [MICCAI 2017 Satellite Workshop], Sep 2017, Quebec City, Canada
Communication dans un congrès
hal-01567343v1
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Diagnosis of Alzheimer’s Disease Through Identification of Abnormality Patterns in FDG PET Data30th Annual Congress of the European Association of Nuclear Medicine (EANM), Oct 2017, Vienna, Austria. pp.253 - 254, ⟨10.1007/s00259-017-3822-1⟩
Communication dans un congrès
hal-01632509v1
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Yet Another ADNI Machine Learning Paper? Paving The Way Towards Fully-reproducible Research on Classification of Alzheimer's DiseaseMachine Learning in Medical Imaging 2017, Sep 2017, Quebec City, Canada. pp.8
Communication dans un congrès
hal-01578479v1
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Early Diagnosis of Alzheimer’s Disease Using Subject-Specific Models of FDG-PET DataAAIC 2017 - Alzheimer's Association International Conference, Jul 2017, London, United Kingdom. pp.1-2, ⟨10.1016/j.jalz.2017.06.1618⟩
Communication dans un congrès
hal-01621383v1
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ClinicaDL: an open-source deep learning software for reproducible neuroimaging processing3IA Doctoral Workshop, Nov 2021, Toulouse, France
Poster de conférence
hal-03423072v2
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Visualization approach to assess the robustness of neural networks for medical image classificationICM days 2019, Jan 2020, Louan, France
Poster de conférence
hal-03365775v1
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Identification of unlabeled latent subtypes with saliency mapsICM welcome days, Oct 2020, Paris (online), France
Poster de conférence
hal-03365788v1
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How serious is data leakage in deep learning studies on Alzheimer’s disease classification?Organization for Human Brain Mapping (OHBM), Jun 2019, Roma, Italy
Poster de conférence
hal-03365742v1
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Interpretability of Machine Learning Methods Applied to NeuroimagingOlivier Colliot. Machine Learning for Brain Disorders, Springer, 2023, ⟨10.1007/978-1-0716-3195-9_22⟩
Chapitre d'ouvrage
hal-03615163v2
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Reproducibility in machine learning for medical imagingOlivier Colliot. Machine Learning for Brain Disorders, Springer, 2023
Chapitre d'ouvrage
hal-03957240v2
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Pseudo-healthy image reconstruction with variational autoencoders for anomaly detection: A benchmark on 3D brain FDG PET2024
Pré-publication, Document de travail
hal-04445378v1
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