AGNES THIERRY

Publications

Article dans une revue (31)

HU promotes higher order chromosome organization and influences DNA replication rates in Streptococcus pneumoniae Maria-Vittoria Mazzuoli,Renske van Raaphorst,Louise S Martin,Florian P Bock,Agnès Thierryet al. Nucleic Acids Research, 2025, 53 (8), pp.gkaf312. ⟨10.1093/nar/gkaf312⟩ Article dans une revue hal-05114065v1
Sequence-dependent activity and compartmentalization of foreign DNA in a eukaryotic nucleus Léa Meneu,Christophe Chapard,Jacques Serizay,Alex Westbrook,Etienne Routhieret al. Science, 2025, 387 (6734), pp.eadm9466. ⟨10.1126/science.adm9466⟩ Article dans une revue hal-04937691v1
RNA Pol II-based regulations of chromosome folding Christophe Chapard,Nathalie Bastié,Axel Cournac,Laura Chaptal,Henri Mboumbaet al. Cell Genomics, 2025, ⟨10.1016/j.xgen.2025.100970⟩ Article dans une revue hal-05121450v1
Parasitic plasmids are anchored to inactive regions of eukaryotic chromosomes through a nucleosome signal Fabien Girard,Antoine Even,Agnès Thierry,Myriam Ruault,Léa Meneuet al. EMBO Journal, 2025, 44 (7), pp.2134 - 2156. ⟨10.1038/s44318-025-00389-1⟩ Article dans une revue hal-05121404v1
Phages with a broad host range are common across ecosystems Amaury Bignaud,Devon Conti,Agnès Thierry,Jacques Serizay,Karine Labadieet al. Nature Microbiology, 2025, 10, pp.2537-2549. ⟨10.1038/s41564-025-02108-2⟩ Article dans une revue pasteur-05269627v1
Chromosome-level genome assembly of the European green woodpecker Picus viridis Thomas Forest,Guillaume Achaz,Martial Marbouty,Amaury Bignaud,Agnès Thierryet al. G3, 2024, 14 (5), pp.jkae042. ⟨10.1093/g3journal/jkae042⟩ Article dans une revue hal-04572175v1
A virally encoded tRNA neutralizes the PARIS antiviral defence system Nathaniel Burman,Svetlana Belukhina,Florence Depardieu,Royce Wilkinson,Mikhail Skutelet al. Nature, 2024, 634 (8033), pp.424-431. ⟨10.1038/s41586-024-07874-3⟩ Article dans une revue pasteur-05116009v1
Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri Sylvain Legrand,Asma Saifudeen,Hélène Bordelet,Julien Vernerey,Arnaud Guilleet al. Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (12), pp.e2312820121. ⟨10.1073/pnas.2312820121⟩ Article dans une revue pasteur-04603593v1
Sister chromatid cohesion halts DNA loop expansion Nathalie Bastié,Christophe Chapard,Axel Cournac,Sanae Nejmi,Henri Mboumbaet al. Molecular Cell, 2024, 84 (6), pp.1139-1148.e5. ⟨10.1016/j.molcel.2024.02.004⟩ Article dans une revue pasteur-04603601v1
Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes Amaury Bignaud,Charlotte Cockram,Céline Borde,Justine Groseille,Eric Allemandet al. Nature Structural and Molecular Biology, 2024, ⟨10.1038/s41594-023-01178-2⟩ Article dans une revue hal-04468362v1
Mechanism of homology search expansion during recombinational DNA break repair in Saccharomyces cerevisiae Agnès Dumont,Nicolas Mendiboure,Jérôme Savocco,Loqmen Anani,Pierrick Moreauet al. Molecular Cell, 2024, 84 (17), pp.3237-3253.e6. ⟨10.1016/j.molcel.2024.08.003⟩ Article dans une revue hal-04887128v2
Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function Jingchuan Luo,Luis A Vale-Silva,Adhithi R Raghavan,Guillaume Mercy,Jonna Heldrichet al. Cell Genomics, 2023, 3 (11), pp.100439. ⟨10.1016/j.xgen.2023.100439⟩ Article dans une revue pasteur-04603588v1
Author Correction: Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants Guilherme Dias de Melo,Victoire Perraud,Flavio Alvarez,Alba Vieites-Prado,Seonhee Kimet al. Nature Communications, 2023, 14 (1), pp.8024. ⟨10.1038/s41467-023-42800-7⟩ Article dans une revue pasteur-04748399v1
Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants Guilherme Dias de Melo,Victoire Perraud,Flavio Alvarez,Alba Vieites-Prado,Seonhee Kimet al. Nature Communications, 2023, 14 (1), pp.4485. ⟨10.1038/s41467-023-40228-7⟩ Article dans une revue pasteur-04171251v1
Depletion or cleavage of cohesin during anaphase differentially affects chromatin structure and segregation Jonay Garcia-Luis,Hélène Bordelet,Agnès Thierry,Romain Koszul,Luis Aragon eLife, 2022, 11, pp.e80147. ⟨10.7554/eLife.80147⟩ Article dans une revue pasteur-04603581v1
Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae Astrid Lancrey,Alexandra Joubert,Evelyne Duvernois-Berthet,Etienne Routhier,Saurabh Rajet al. Journal of Molecular Biology, 2022, 434 (7), pp.167497. ⟨10.1016/j.jmb.2022.167497⟩ Article dans une revue hal-03343705v2
The Formation of Neochromosomes during Experimental Evolution in the Yeast Saccharomyces cerevisiae Agnès Thierry,Varun Khanna,Bernard Dujon Genes, 2021, 12 (11), pp.1678. ⟨10.3390/genes12111678⟩ Article dans une revue pasteur-03684574v1
MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut Martial Marbouty,Agnès Thierry,Gael A. Millot,Romain Koszul eLife, 2021, 10, pp.e60608. ⟨10.7554/eLife.60608⟩ Article dans une revue pasteur-03369735v1
Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization Charlotte Cockram,Agnès Thierry,Aurore Gorlas,Roxane Lestini,Romain Koszul Molecular Cell, 2021, 81 (3), pp.459-472.e10. ⟨10.1016/j.molcel.2020.12.013⟩ Article dans une revue hal-03379787v1
Cohesin regulates homology search during recombinational DNA repair Aurèle Piazza,Hélène Bordelet,Agnès Dumont,Agnès Thierry,Jérôme Savoccoet al. Nature Cell Biology, 2021, 23 (11), pp.1176-1186. ⟨10.1038/s41556-021-00783-x⟩ Article dans une revue hal-03427219v1
Generation of gene-level resolution chromosome contact maps in bacteria and archaea Charlotte Cockram,Agnès Thierry,Romain Koszul STAR Protocols, 2021, 2 (2), pp.100512. ⟨10.1016/j.xpro.2021.100512⟩ Article dans une revue pasteur-03376845v1
Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners Lise Dauban,Rémi Montagne,Agnès Thierry,Luciana Lazar-Stefanita,Nathalie Bastiéet al. Molecular Cell, 2020, 77 (6), pp.1279-1293.e4. ⟨10.1016/j.molcel.2020.01.019⟩ Article dans une revue hal-03064572v1
Condensin-Mediated Chromosome Folding and Internal Telomeres Drive Dicentric Severing by Cytokinesis Thomas Guerin,Claire Béneut,Natalja Barinova,Virginia López,Luciana Lazar-Stefanitaet al. Molecular Cell, 2019, 75 (1), pp.131-144.e3. ⟨10.1016/j.molcel.2019.05.021⟩ Article dans une revue pasteur-02866762v1
Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes Agnès Thierry,Varun Khanna,Sophie Créno,Ingrid Lafontaine,Laurence Maet al. Nature Communications, 2015, 6, pp.6154. ⟨10.1038/ncomms7154⟩ Article dans une revue hal-01116452v1
The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest. Gotthard Kunze,Claude Gaillardin,Małgorzata Czernicka,Pascal Durrens,Tiphaine Martinet al. Biotechnology for Biofuels, 2014, 7 (1), pp.66. ⟨10.1186/1754-6834-7-66⟩ Article dans une revue pasteur-00988609v1
Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization Véronique Leh Louis,Laurence Despons,Anne Friedrich,Tiphaine Martin,Pascal Durrenset al. G3, 2012, 2 (2), pp.299 - 311. ⟨10.1534/g3.111.000745⟩ Article dans une revue hal-00679348v1
Megasatellites: a new class of large tandem repeats discovered in the pathogenic yeast Candida glabrata Guy-Franck Richard,Agnès Thierry,Bernard Dujon Cellular and Molecular Life Sciences, 2010, 67 (5), pp.671-6. ⟨10.1007/s00018-009-0216-y⟩ Article dans une revue pasteur-01370699v1
Comparative genomics of protoploid Saccharomycetaceae Jean-Luc Souciet,Bernard Dujon,Claude Gaillardin,Mark Johnston,Philippe V Baretet al. Genome Research, 2009, 19, pp.1696-1709. ⟨10.1101/gr.091546.109⟩ Article dans une revue inria-00407511v1
Large-scale Exploration of Growth Inhibition Caused by Overexpression of Genomic Fragments in Saccharomyces cerevisiae Jeanne Boyer,Gwenaël Badis,Cécile Fairhead,Emmanuel Talla,Florence Hantrayeet al. Genome Biology, 2004, 5 (9), pp.R72. ⟨10.1186/gb-2004-5-9-r72⟩ Article dans une revue pasteur-02868108v1
XI. Yeast sequencing reports. The sequence of a 9·3 kb segment located on the left arm of the yeast chromosome XI reveals five open reading frames including the CCE1 gene and putative products related to MYO2 and to the ribosomal protein L10 Steve Pascolo,Marjan Ghazvini,Jeanne Boyer,Laurence Colleaux,Agnès Thierryet al. Yeast, 1992, 8 (11), pp.987-995. ⟨10.1002/yea.320081109⟩ Article dans une revue hal-02090246v1
Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron Claude Monteilhet,Arnaud Perrin,Agnès Thierry,Laurence Colleaux,Bernard Dujon Nucleic Acids Research, 1990, 18 (6), pp.1407-13. ⟨10.1093/nar/18.6.1407⟩ Article dans une revue hal-02090248v1

Communication dans un congrès (1)

Gene resolution Hi-C reveals Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization Charlotte Cockram,Agnès Thierry,A. Gorlas,Roxane Lestini,Romain Koszul Archaea Online 2021 conference (AOL2021), Jul 2021, Palaiseau (Ecole Polytechnique), France Communication dans un congrès hal-04381892v1

Chapitre d'ouvrage (1)

Generating High-Resolution Hi-C Contact Maps of Bacteria Agnès Thierry,Charlotte Cockram Hi-C Data Analysis, 2301, Springer US, pp.183-195, 2021, Methods in Molecular Biology, 978-1-0716-1390-0. ⟨10.1007/978-1-0716-1390-0_9⟩ Chapitre d'ouvrage pasteur-03686079v1

Pré-publication, Document de travail (4)

Sister chromatid cohesion halts DNA loop expansion Nathalie Bastié,Christophe Chapard,Sanae Nejmi,Henri Mboumba,Agnès Thierryet al. 2023 Pré-publication, Document de travail hal-05370213v1
Anchoring of parasitic plasmids to inactive regions of eukaryotic chromosomes through nucleosome signal Fabien Girard,Antoine Even,Agnès Thierry,Myriam Ruault,Léa Meneuet al. 2023 Pré-publication, Document de travail hal-04278856v1
Exogenous chromosomes reveal how sequence composition drives chromatin assembly, activity, folding and compartmentalization Christophe Chapard,Léa Meneu,Jacques Serizay,Alex Westbrook,Etienne Routhieret al. 2023 Pré-publication, Document de travail hal-04278801v1
Gene level resolution of bacteria and archaea genome folding Charlotte Cockram,Agnès Thierry,Roxane Lestini,Romain Koszul 2021 Pré-publication, Document de travail hal-03106900v1