Alban Gaignard

Publications

Article dans une revue (19)

LLM4Schema.org : Generating Schema.org Markups with Large Language Models Minh-Hoang Dang,Thi Hoang Thi Pham,Pascal Molli,Hala Skaf-Molli,Alban Gaignard Semantic Web – Interoperability, Usability, Applicability, 2025, ⟨10.1177/22104968251382172⟩ Article dans une revue hal-05138664v2
FAIR-Checker: supporting digital resource findability and reuse with Knowledge Graphs and Semantic Web standards Alban Gaignard,Thomas Rosnet,Frédéric de Lamotte,Vincent Lefort,Marie-Dominique Devignes Journal of Biomedical Semantics, 2023, 14 (1), pp.7. ⟨10.1186/s13326-023-00289-5⟩ Article dans une revue hal-04148181v1
Developing and reusing bioinformatics data analysis pipelines using scientific workflow systems Marine Djaffardjy,George Marchment,Clémence Sebe,Raphaël Blanchet,Khalid Belhajjameet al. Computational and Structural Biotechnology Journal, 2023, 21, pp.2075-2085. ⟨10.1016/j.csbj.2023.03.003⟩ Article dans une revue hal-04037221v2
A taxonomy of tools and approaches for distributed genomic analyses Wilmer Garzón,Luis Daniel Benavides Navarro,Alban Gaignard,Richard Redon,Mario Südholt Informatics in Medicine Unlocked, 2022, 32, pp.1-17. ⟨10.1016/j.imu.2022.101024⟩ Article dans une revue hal-03748752v1
Bioimage analysis workflows: community resources to navigate through a complex ecosystem Perrine Paul-Gilloteaux,Sébastien Tosi,Jean-Karim Hériché,Alban Gaignard,Hervé Ménageret al. F1000Research, 2021, 10, pp.320. ⟨10.12688/f1000research.52569.1⟩ Article dans une revue hal-03208600v1
Location of intracranial aneurysms is the main factor associated with rupture in the ICAN population Olivia Rousseau,Matilde Karakachoff,Alban Gaignard,Lise Bellanger,Philippe Bijlengaet al. Journal of Neurology, Neurosurgery and Psychiatry, 2021, 92 (2), jnnp-2020-324371. ⟨10.1136/jnnp-2020-324371⟩ Article dans une revue hal-03033899v1
Large-scale regulatory and signaling network assembly through linked open data Marie Lefebvre,Alban Gaignard,Maxime Folschette,Jérémie Bourdon,Carito Guziolowski Database - The journal of Biological Databases and Curation, 2021, 2021, pp.baaa113. ⟨10.1093/database/baaa113⟩ Article dans une revue hal-03107317v2
biotoolsSchema: a formalized schema for bioinformatics software description Jon Ison,Hans Ienasescu,Emil Rydza,Piotr Chmura,Kristoffer Rapackiet al. GigaScience, 2021, 10 (1), pp.giaa157. ⟨10.1093/gigascience/giaa157⟩ Article dans une revue hal-03145289v1
Findable and reusable workflow data products: A genomic workflow case study Alban Gaignard,Hala Skaf-Molli,Khalid Belhajjame Semantic Web – Interoperability, Usability, Applicability, 2020, pp.1-13. ⟨10.3233/SW-200374⟩ Article dans une revue hal-02903805v1
Prediction of Unruptured Intracranial Aneurysm Evolution: The UCAN Project Vincent L'Allinec,Stéphanie Chatel,Matilde Karakachoff,Emmanuelle Bourcereau,Zeineb Es-Salah-Lamoureuxet al. Neurosurgery, 2020, ⟨10.1093/neuros/nyaa093⟩ Article dans une revue hal-02889889v1
Characterization of 3D Bifurcations in Micro-scan and MRA-TOF Images of Cerebral Vasculature for Prediction of Intra-Cranial Aneurysms Anass Nouri,Florent Autrusseau,Romain Bourcier,Alban Gaignard,Vincent L'Allinecet al. Computerized Medical Imaging and Graphics, 2020, 84C, ⟨10.1016/j.compmedimag.2020.101751⟩ Article dans une revue hal-02888926v1
Whole-exon sequencing of human myeloma cell lines shows mutations related to myeloma patients at relapse with major hits in the DNA regulation and repair pathways Benoit Tessoulin,Agnès Moreau-Aubry,Géraldine Descamps,Patricia Gomez-Bougie,Sophie Maigaet al. Journal of Hematology and Oncology, 2018, 11 (1), pp.137. ⟨10.1186/s13045-018-0679-0⟩ Article dans une revue inserm-01958772v1
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities Sarah Cohen-Boulakia,Khalid Belhajjame,Olivier Collin,Jérôme Chopard,Christine Froidevauxet al. Future Generation Computer Systems, 2017, 75, pp.284-298. ⟨10.1016/j.future.2017.01.012⟩ Article dans une revue hal-01516082v1
Understanding the Pathophysiology of Intracranial Aneurysm: The ICAN Project Romain Bourcier,Stéphanie Chatel,Emmanuelle Bourcereau,Solène Jouan,Hervé Le Marecet al. Neurosurgery, 2017, 80 (4), pp.621-626. ⟨10.1093/neuros/nyw135⟩ Article dans une revue hal-01768333v1
Domain-specific summarisation of Life-Science e-experiments from provenance traces Alban Gaignard,Johan Montagnat,Bernard Gibaud,Germain Forestier,Tristan Glatard Journal of Web Semantics, 2014, 29, pp.19-30. ⟨10.1016/j.websem.2014.07.001⟩ Article dans une revue hal-01027596v1
OntoVIP: An ontology for the annotation of object models used for medical image simulation. Bernard Gibaud,Germain Forestier,Hugues Benoit-Cattin,Frédéric Cervenansky,Patrick Clarysseet al. Journal of Biomedical Informatics, 2014, 52, pp.279-92. ⟨10.1016/j.jbi.2014.07.008⟩ Article dans une revue inserm-01062371v1
A virtual imaging platform for multi-modality medical image simulation. Tristan Glatard,Carole Lartizien,Bernard Gibaud,Rafael Ferreira da Silva,Germain Forestieret al. IEEE Transactions on Medical Imaging, 2013, 32 (1), pp.110-8. ⟨10.1109/TMI.2012.2220154⟩ Article dans une revue inserm-00762497v1
Composing Multiple Variability Artifacts to Assemble Coherent Workflows Mathieu Acher,Philippe Collet,Alban Gaignard,Philippe Lahire,Johan Montagnatet al. Software Quality Journal, 2012, 20 (3-4), pp.689-734. ⟨10.1007/s11219-011-9170-7⟩ Article dans une revue istex hal-00733556v1
Federating distributed and heterogeneous information sources in neuroimaging: the NeuroBase Project. Christian Barillot,Habib Benali,Michel Dojat,Alban Gaignard,Bernard Gibaudet al. Studies in Health Technology and Informatics, 2006, 120, pp.3-13 Article dans une revue inserm-00141685v1

Communication dans un congrès (39)

A Standards-Based Knowledge Graph that Bridges Scientific Workflows, Run-Time Provenance, and Tool Registries Marie Schmit,Ulysse Le Clanche,George Marchment,Sarah Cohen-Boulakia,Olivier Dameronet al. SWAT4HCLS 2026, Mar 2026, Amsterdam, Netherlands Communication dans un congrès hal-05517640v1
Prédiction d'événements cliniques à partir des parcours de soins de patients représentés par des graphes de connaissances temporels Jong Ho Jhee,Alberto Megina,Pacôme Constant Dit Beaufils,Matilde Karakachoff,Richard Redonet al. IC 2025 - 36e Journées Francophones d'Ingénierie des Connaissances, AFIA, Jul 2025, Dijon, France Communication dans un congrès hal-05375218v1
Predicting clinical outcomes from patient care pathways represented with temporal knowledge graphs Jong Ho Jhee,Alberto Megina,Pacôme Constant Dit Beaufils,Matilde Karakachoff,Richard Redonet al. ESWC 2025 - 22nd European Semantic Web Conference, Jun 2025, Portorož, Slovenia. pp.282-300, ⟨10.1007/978-3-031-94575-5_16⟩ Communication dans un congrès hal-05136324v1
SparqLLM : Retrieval-Augmented SPARQL Query Processing Pascal Molli,Hala Skaf-Molli,Sébastien Ferré,Alban Gaignard,Peggy Cellier ESWC 2025 - 22nd European Semantic Web Conference, Jun 2025, Portoroz, Slovenia. pp.1-5 Communication dans un congrès hal-05138658v1
Semantic Beacons: a framework to support federated querying over genomic variants and public Knowledge Graphs Alexandrina Bodrug-Schepers,Hugo Chabane,Gabriela Montoya,Richard Redon,Alban Gaignardet al. SWAT4HCLS 2025, Feb 2025, Barcelona, Catalonia, Spain Communication dans un congrès hal-04908530v2
A Generic Framework to Better Understand and Compare FAIRness Measures Philippe Lamarre,Jennie Andersen,Alban Gaignard,Sylvie Cazalens EKAW 2024, Nov 2024, Amsterdam, Netherlands. pp.291-308, ⟨10.1007/978-3-031-77792-9_18⟩ Communication dans un congrès hal-04830524v1
Assessing bioinformatics software annotations: bio.tools case-study Ulysse Le Clanche,Sarah Cohen-Boulakia,Yann Le Cunff,Olivier Dameron,Alban Gaignard JOBIM 2025 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2025, Bordeaux & Online, France. pp.1-7 Communication dans un congrès hal-05096849v1
A multi-modal and temporal antibiotic resistance knowledge graph Brieuc Quemeneur,Audrey Bihouée,Samuel Chaffron,Claudine Médigue,Hervé Ménageret al. SWAT4HCLS 2025 - 16th International SWAT4HCLS conference : Semantic Web Applications and Tools for Health Care and Life Sciences, Scientifika, Feb 2025, Barcelone, Spain Communication dans un congrès hal-04976716v1
A generic framework to better understand and compare FAIRness measures Philippe Lamarre,Jennie Andersen,Alban Gaignard,Sylvie Cazalens Knowledge Engineering and Knowledge Management - 24rd International Conference, EKAW 2024, Nov 2024, Amsterdam, Netherlands Communication dans un congrès hal-04709107v1
Extraction d'informations sur les workflows scientifiques à partir de la littérature Clémence Sebe,Aurélie Névéol,Sarah Cohen-Boulakia,Alban Gaignard 23ème conférence francophone sur l'Extraction et la Gestion des Connaissances (EGC), Jan 2023, Lyon, France. pp.313-320 Communication dans un congrès hal-03991363v1
Schema.org : How is it used? Minh-Hoang Dang,Alban Gaignard,Hala Skaf-Molli,Pascal Molli International Semantic Web Conference (ISWC) 2023, Nov 2023, Athens, France Communication dans un congrès hal-04250523v2
(more) Findable bioinformatics softwares with Bioschemas Alban Gaignard Elixir Tools platform, F2F meeting, Elixir, Mar 2023, Leyden, Netherlands Communication dans un congrès hal-04057569v1
Découvrabilité et réutilisation de données produites par des workflows : un cas d’usage en génomique Alban Gaignard,Hala Skaf-Molli,Khalid Belhajjame Journées Francophones d'Ingénierie des Connaissances (IC) Plate-Forme Intelligence Artificielle (PFIA'21), Jun 2021, Bordeaux, France. pp 73-80 Communication dans un congrès emse-03260542v1
On distributed collaboration for biomedical analyses Fatima-Zahra Boujdad,Alban Gaignard,Mario Südholt,Wilmer Garzón-Alfonso,Luis Daniel Benavides Navarroet al. CCGrid-Life 2019 Workshop on Clusters, Clouds and Grids for Life Sciences, May 2019, Larnaca, Cyprus. pp.1-10, ⟨10.1109/CCGRID.2019.00079⟩ Communication dans un congrès hal-02080463v1
3D bifurcations characterization for intra-cranial aneurysms prediction Anass Nouri,Florent Autrusseau,Romain Bourcier,Alban Gaignard,Vincent L'Allinecet al. SPIE Medical Imaging, Feb 2019, San Diego, CA, United States. ⟨10.1117/12.2504626⟩ Communication dans un congrès hal-01896717v1
INEX-MED: a Knowledge Graph to explore and link heterogeneous bio-medical data Maxime Folschette,Kirsley Chennen,Alban Gaignard,Richard Redon,Hala Skaf-Molliet al. JOBIM 2019, Jul 2019, Nantes, France Communication dans un congrès hal-02330809v1
Regulation and signalization graph assembly through Linked Open Data Marie Lefebvre,Jérémie Bourdon,Carito Guziolowski,Alban Gaignard JOBIM 2017, Jul 2017, Lille, France Communication dans un congrès hal-01768420v1
SHARP: Harmonizing cross-workflow provenance Alban Gaignard,Khalid Belhajjame,Hala Skaf-Molli SeWeBMeDA 2017 : Semantic Web solutions for large-scale BioMedical Data Analtics - 14th ESWC 2017, May 2017, Portoroz, Slovenia Communication dans un congrès hal-01768394v1
SHARP: Harmonizing Galaxy and Taverna workflow provenance Alban Gaignard,Khalid Belhajjame,Hala Skaf-Molli SeWeBMeDA 2017 : Semantic Web solutions for large-scale BioMedical Data Analtics, May 2017, Portoroz, Slovenia Communication dans un congrès hal-01768401v1
SHARP: Harmonizing and Bridging Cross-Workflow Provenance Alban Gaignard,Khalid Belhajjame,Hala Skaf-Molli The Semantic Web: ESWC 2017 Satellite Events - ESWC 2017 Satellite Events, Jun 2017, Portoro, Slovenia. pp.219-234, ⟨10.1007/978-3-319-70407-4_35⟩ Communication dans un congrès hal-03875895v1
Developing and sharing reproducible bioinformatics pipelines: best practices Yohann Lelièvre,Audrey Bihouée,Eric Charpentier,Alban Gaignard,Simon Souchetet al. JOBIM 2017, Jul 2017, Lille, France Communication dans un congrès hal-01768429v1
From scientific workflow patterns to 5-star linked open data Alban Gaignard,Hala Skaf-Molli,Audrey Bihouée TaPP 2016: 8th USENIX Workshop on the Theory and Practice of Provenance, Jun 2016, Washington D.C., United States Communication dans un congrès hal-01768449v1
Publication, partage et réutilisation de règles sur le Web de données Oumy Seye,Catherine Faron Zucker,Olivier Corby,Alban Gaignard 25èmes Journées francophones d'Ingénierie des Connaissances, May 2014, Clermont-Ferrand, France. pp.237-248 Communication dans un congrès hal-01015281v1
Global Initiative for Sentinel e-Health Network on Grid (GINSENG), Medical data integration and semantic developments for epidemiology S Cipiere,G. Ereteo,Alban Gaignard,Boujelben N.,S. Gaspardet al. CCGRID, May 2014, Chicago, United States Communication dans un congrès hal-02083188v1
Semantic Federation of Distributed Neurodata Alban Gaignard,Johan Montagnat,Catherine Faron Zucker,Olivier Corby MICCAI Workshop on Data- and Compute-Intensive Clinical and Translational Imaging Applications, Oct 2012, Nice, France. pp.41-50 Communication dans un congrès hal-00746765v1
Fédération multi-sources en neurosciences : intégration de données relationnelles et sémantiques Alban Gaignard,Johan Montagnat,Catherine Faron Zucker,Olivier Corby IC pour l'Interopérabilité Sémantique dans les applications en e-Santé, Jun 2012, France. 6 p Communication dans un congrès hal-01018722v1
KGRAM Versatile Inference and Query Engine for the Web of Linked Data Olivier Corby,Alban Gaignard,Catherine Faron Zucker,Johan Montagnat IEEE/WIC/ACM International Conference on Web Intelligence, Dec 2012, Macao, China. pp.1-8 Communication dans un congrès hal-00746772v1
Characterizing semantic service parameters with Role concepts to infer domain-specific knowledge at runtime Alban Gaignard,Johan Montagnat,Bacem Wali,Bernard Gibaud International Conference on Knowledge Engineering and Ontology Development (KEOD'11), Oct 2011, Paris, France. pp.12 Communication dans un congrès hal-00677829v1
NeuroLOG: A framework for the sharing and reuse of distributed tools and data in neuroimaging Michel Dojat,Mélanie Pélégrini-Issac,Farooq Ahmad,Christian Barillot,Bénédicte Batrancourtet al. Organization for Human Brain Mapping (HBM'11), Jun 2011, Quebec, Canada Communication dans un congrès hal-00813796v1
A federated system for sharing and reuse of images and image processing tools in neuroimaging Bernard Gibaud,Farooq Ahmad,Christian Barillot,Franck Michel,Bacem Waliet al. Computer Assisted Radiology and Surgery (CARS'11), Jun 2011, Berlin, Germany Communication dans un congrès hal-00690921v1
NeuroLOG: sharing neuroimaging data using an ontology-based federated approach. Bernard Gibaud,Gilles Kassel,Michel Dojat,Bénédicte Batrancourt,Franck Michelet al. American Medical Informatics Association, Oct 2011, Washington DC, United States. pp.472-80 Communication dans un congrès hal-00683087v1
Grid-wide neuroimaging data federation in the context of the NeuroLOG project. Franck Michel,Alban Gaignard,Farooq Ahmad,Christian Barillot,Bénédicte Batrancourtet al. HealthGrid'10, Jun 2010, Paris, France. pp.112-123, ⟨10.3233/978-1-60750-583-9-112⟩ Communication dans un congrès inserm-00512799v1
Intégration des connaissances en neurosciences dans un environnement multi-centrique Alban Gaignard,Johan Montagnat Journées francophones d'Ingénierie des Connaissances (IC 2010), Jun 2010, Nîmes, France. pp.21-30 Communication dans un congrès hal-00691827v1
A distributed security policy for neuroradiological data sharing Alban Gaignard,Johan Montagnat HealthGrid 2009, Jun 2009, Berlin, Germany. pp.257-262, ⟨10.3233/978-1-60750-027-8-257⟩ Communication dans un congrès hal-00677795v1
Managing Variability Complexity in Aspect-Oriented Modeling Brice Morin,Gilles Vanwormhoudt,Philippe Lahire,Alban Gaignard,Olivier Baraiset al. In Proceedings of ACM/IEEE 11th International Conference on Model Driven Engineering Languages and Systems (MoDELS 08), 2008, Toulouse, France, France Communication dans un congrès inria-00457129v1
Managing Variability Complexity in Aspect Oriented Modelling Brice Morin,Gilles Vanwormhoudt,Philippe Lahire,Alban Gaignard,Olivier Baraiset al. 12th International Conference on Model Driven Engineering Languages and Systems (MODELS'2009), ACM/IEEE, Sep 2008, Toulouse, France. pp.797-812 Communication dans un congrès hal-00415774v1
NeuroLOG: a community-driven middleware design Johan Montagnat,Alban Gaignard,Diane Lingrand,Javier Rojas Balderrama,Philippe Colletet al. HealthGrid, Jun 2008, Chicago, United States. pp.49--58 Communication dans un congrès hal-00461611v1
Introducing variability into Aspect-Oriented Modeling approaches Philippe Lahire,Brice Morin,Gilles Vanwormhoudt,Alban Gaignard,Olivier Baraiset al. In Proceedings of ACM/IEEE 10th International Conference on Model Driven Engineering Languages and Systems (MoDELS 07), 2007, Nashville, TN, USA, United States Communication dans un congrès inria-00477562v1
Sharing data and image processing tools in neuroimaging. Bernard Gibaud,Christian Barillot,Habib Benali,Michel Dojat,Alban Gaignardet al. CARS 2006 - Computer Assisted Radiology and Surgery, Jun 2006, Osaka, Japan. pp.41-42 Communication dans un congrès inserm-00152138v1

Poster de conférence (15)

Integrating Bioconductor packages with the ELIXIR research software ecosystem using EDAM Claire Rioualen,Maria Doyle,Alban Gaignard,Vincent J. Carey,Hervé Ménager ELIXIR All Hands Meeting, 2025, Jun 2025, Thessalokini, Greece. F1000 Research Limited, F1000Research 2025, 14(ELIXIR):524 (poster), 2025, ⟨10.7490/f1000research.1120184.1⟩ Poster de conférence hal-05098338v1
Monitoring inclusions and quality criteria on MRI imaging data in a multi-center context Julien Louis,Alban Gaignard,Michael Kain,Laurent Vallet,Romain Bourcieret al. PEPR-SanteNum 2025 - Journées Annuelles du PEPR Santé Numérique, Oct 2025, Lille, France. pp.1-1, 2025 Poster de conférence hal-05368780v1
A multi-modal and temporal antibiotic resistance knowledge graph Brieuc Quemeneur,Audrey Bihouée,Samuel Chaffron,Claudine Médigue,Hervé Ménageret al. JOBIM 2025, Jul 2025, Bordeaux, France. , 2025 Poster de conférence hal-05126299v2
Annotating Bioconductor packages using the EDAM ontology Claire Rioualen,Maria Doyle,Alban Gaignard,Vincent J. Carey,Hervé Ménager Journées Ouvertes en Biologie Informatique et Mathématiques JOBIM 2025, Jul 2025, Bordeaux, France Poster de conférence hal-05142802v1
Interoperability of Bioconductor packages within the ELIXIR Research Software Ecosystem using the EDAM ontology Claire Rioualen,Maria Doyle,Alban Gaignard,Vincent Carey,Hervé Ménager European Bioconductor Conference 2025, Sep 2025, Barcelone, Spain. Zenodo, 2025, ⟨10.5281/zenodo.17086358⟩ Poster de conférence hal-05250261v1
The EDAM Framework and Control Room Claire Rioualen,Alban Gaignard,Matúš Kalaš,Hervé Ménager Journées Ouvertes en Biologie Informatique et Mathématiques JOBIM 2024, Jun 2024, Toulouse, France Poster de conférence hal-04619281v1
Orchestrating data flows throughout their whole life cycle Konogan Bourhy,Laurent Bouri,Christophe Bruley,Olivier Collin,Frédéric De Lamotteet al. JOBIM 2024 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2024, Toulouse, France. , 2024 Poster de conférence hal-04618277v1
The ELIXIR research software ecosystem Hans-Ioan Ienasescu,Salvador Capella-Gutierrez,Frederik Coppens,José Mª Fernandez,Alban Gaignardet al. 24th annual Bioinformatics Open Source Conference (BOSC 2023), Jul 2023, Lyon, France. , ⟨10.7490/f1000research.1119595.1⟩ Poster de conférence hal-05206335v1
Towards improving workflows reproducibility : Extracting information on workflows from text and code repositories Clémence Sebe,Frédéric Lemoine,Alban Gaignard,Olivier Ferret,Sarah Cohen-Boulakiaet al. 31st Annual Intelligent Systems For Molecular Biology and 22nd Annual European Conference on Computational Biology (ISMB/ECCB 2023), Jul 2023, Lyon, France. Poster de conférence hal-04363577v1
FAIR-Checker : Checking and Inspecting metadata for FAIR bioinformatics resources Thomas Rosnet,F de Lamotte,Marie-Dominique Devignes,Vincent Lefort,A Gaignard Elixir AllHands 2022, Jun 2022, Amsterdam, Netherlands Poster de conférence hal-03807367v1
EDAM, the life-science ontology for data analysis and management Lucie Lamothe,Alban Gaignard,Mads Kierkegaard,Hager Eldakroury,Melissa Blacket al. JOBIM, Jul 2022, Rennes, France. ⟨10.5281/zenodo.6769072⟩ Poster de conférence hal-03702557v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2019) Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. 3rd NEUBIAS Bioimage Analysis Community Conference 2019, Jun 2020, Luxembourg, Luxembourg Poster de conférence hal-02910949v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats (update 2020) Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. ELIXIR All Hands 2020, Jun 2020, Virtual, United Kingdom Poster de conférence hal-02910948v1
INEX-MED: INtegration and EXploration of heterogeneous bio-MEDical data Alban Gaignard,Julie D. Thompson,Kirsley Chennen,Maxime Folschette,Jocelyn Laporteet al. JOBIM 2019, Jul 2019, Nantes, France Poster de conférence hal-02330853v1
EDAM-bioimaging : The ontology of bioimage informatics operations, topics, data, and formats Matúš Kalaš,Laure Plantard,Nataša Sladoje,Joakim Lindblad,Moritz Alexander Kirschmannet al. NEUBIAS, Feb 2019, Luxembourg, Luxembourg. ⟨10.7490/f1000research.1115257.1⟩ Poster de conférence hal-02267597v1

Chapitre d'ouvrage (1)

SHARP: Harmonizing and Bridging Cross-Workflow Provenance Alban Gaignard,Khalid Belhajjame,Hala Skaf-Molli The Semantic Web: ESWC 2017 Satellite Events Portorož, Slovenia, May 28 – June 1, 2017, Revised Selected Papers, 2017 Chapitre d'ouvrage hal-01768385v1

Pré-publication, Document de travail (1)

Bio-Image Informatics Index BIII: A unique database of image analysis tools and workflows for and by the bioimaging community Chong Zhang,Alban Gaignard,Matus Kalas,Florian Levet,Felipe Delestroet al. 2024 Pré-publication, Document de travail hal-04453549v1

Rapport (3)

An evaluation of EDAM coverage in the Tools Ecosystem and prototype integration of Galaxy and WorkflowHub systems Lucie Lamothe,Jennifer Rugaard Bregndahl Jensen,Hans Ienasescu,Ove Johan Ragnar Gustafsson,Alban Gaignardet al. ELIXIR. 2023 Rapport hal-04206284v1
Atelier MoDaL (Multi-Scale Data Links) Aurélien Cornet,Christian Barillot,Olivier Dameron,Alban Gaignard,Camille Maumetet al. [Rapport de recherche] IRISA, Inria Rennes. 2020 Rapport (rapport de recherche) inserm-02507799v4
État des lieux MoDaL (Multi-Scale Data Links) Aurélien Cornet,Christian Barillot,Olivier Dameron,Alban Gaignard,Camille Maumetet al. [Rapport de recherche] IRISA, Inria Rennes. 2020 Rapport (rapport de recherche) hal-02557351v1

Thèse (1)

Distributed knowledge sharing and production through collaborative e-Science platforms Alban Gaignard Other [cs.OH]. Université Nice Sophia Antipolis, 2013. English. ⟨NNT : 2013NICE4010⟩ Thèse tel-00827926v2

Cours (1)

Sharing massive data analysis: from provenance to linked experiment reports Alban Gaignard Doctoral. France. 2018 Cours cel-02069606v1