Anna-Sophie Fiston-Lavier

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Publications

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Why and how to set up a Bioinformatics Learning Lab (BILL)

Anna-Sophie Fiston-Lavier , Emira Cherif , Marie-Ka Tilak , Arnaud Soulier , Catherine Breton et al.

PLoS Computational Biology, 2025, 21 (8), pp.e1013236. ⟨10.1371/journal.pcbi.1013236⟩

Article dans une revue hal-05279437v1
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ISMB/ECCB 2023 organization benefited from the strengths of the French bioinformatics community

Anna-Sophie Fiston-Lavier , Sandra Dérozier , Guy Perrière , Marie-France Sagot

Bioinformatics Advances, 2024, 4 (1), pp.vbae040. ⟨10.1093/bioadv/vbae040⟩

Article dans une revue hal-04684148v1

Effective population size does not explain long-term variation in genome size and transposable element content in animals

Alba Marino , Gautier Debaecker , Anna-Sophie Fiston-Lavier , Annabelle Haudry , Benoit Nabholz

eLife, In press, ⟨10.7554/eLife.100574.1⟩

Article dans une revue hal-04791560v1

Involving repetitive regions in scaffolding improvement

Quentin Delorme , Rémy Costa , Yasmine Mansour , Anna-Sophie Fiston-Lavier , Annie Chateau

Journal of Bioinformatics and Computational Biology, 2021, 19 (06), pp.2140016. ⟨10.1142/S0219720021400163⟩

Article dans une revue hal-04954688v1

Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia

Xiaowei Zhu , Bo Zhou , Reenal Pattni , Kelly Gleason , Chunfeng Tan et al.

Nature Neuroscience, 2021, 24 (2), pp.186-196. ⟨10.1038/s41593-020-00767-4⟩

Article dans une revue hal-04954735v1
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A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits

L. Hibrand Saint-Oyant , T. Ruttink , L. Hamama , I. Kirov , D. Lakhwani et al.

Nature Plants, 2018, 4 (7), pp.473 - 484. ⟨10.1038/s41477-018-0166-1⟩

Article dans une revue hal-01873309v1

Ancient hybridizations among the ancestral genomes of bread wheat

T. Marcussen , S. Sandve , L. Heier , M. Spannagl , M. Pfeifer et al.

Science, 2014, 345 (6194), pp.1250092-1250092. ⟨10.1126/science.1250092⟩

Article dans une revue hal-02889053v1
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Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations

Thierry Rouxel , J. Grandaubert , Jk. Hane , Claire Hoede , Angela P. van de Wouw et al.

Nature Communications, 2011, 2, pp.202. ⟨10.1038/ncomms1189⟩

Article dans une revue hal-00841751v1
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Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements.

E. d'Alençon , H. Sezutsu , Fabrice Legeai , E. Permal , S. Bernard-Samain et al.

Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (17), pp.7680-5. ⟨10.1073/pnas.0910413107⟩

Article dans une revue inria-00537908v1
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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

F. Martin , A. Aerts , D. Ahrén , A. Brun , E. G. J. Danchin et al.

Nature, 2008, 452 (7183), pp.88-93. ⟨10.1038/nature06556⟩

Article dans une revue halsde-00261893v1

A genomic perspective on population structure and adaptation to aridity in the four-striped mouse Rhabdomys bechuanae in Southern Africa

H Keilani , Anna-Sophie Fiston-Lavier , P Caminade , A Loiseau , M Galan et al.

Congress of the European Society for Evolutionary Biology (ESEB 2025), Sociedad Española de Biología Evolutiva, Aug 2025, Barcelona, Spain

Communication dans un congrès hal-05226826v1

Genomic variations in Cyvirus cyprinidallo3 and their implication for its evolution

Nurul Fuandila , Marie-Ka Tilak , Anna-Sophie Fiston-Lavier , Emira Cherif , Munti Yuhana et al.

3. Joint Conference of the Association of Institutions for Tropical Veterinary Medicine & Society for Tropical Veterinary Medicine, May 2024, Montpellier, France

Communication dans un congrès hal-04950572v1

Pangenomic variations and differentiation between the two African malaria vector sister species Anopheles gambiae and Anopheles coluzzii

Clothilde Chenal , Corentin Marco , Francois Sabot , Chris S Clarkson , Alistair Miles et al.

ESOVE 2024 - 23rd European Society for Vector Ecology Conference, Vectopole Sud; SOVE (Society for Vector Ecology), Oct 2024, Montpellier, France. pp.S1-1

Communication dans un congrès hal-05006323v1

Virulence evolution of Cyprinid herpesvirus 3, a large double-stranded DNA virus

Nurul Fuandila , Marie-Ka Tilak , Sandro Klafack , Sven M. Bergmann , Anna-Sophie Fiston-Lavier et al.

21. International Conference on Diseases of Fish and Shellfish, Sep 2023, Aberdeen, United Kingdom

Communication dans un congrès hal-04950575v1

Le projet d'innovation pédagogique BILL

Anna-Sophie Fiston-Lavier , Anne-Sophie Gosselin-Grenet , Jean-Christophe Avarre

Montpellier Omics Days, Feb 2023, Montpellier, France

Communication dans un congrès hal-04950566v1