Anna-Sophie Fiston-Lavier

Publications

Article dans une revue (10)

Why and how to set up a Bioinformatics Learning Lab (BILL) Anna-Sophie Fiston-Lavier,Emira Cherif,Marie-Ka Tilak,Arnaud Soulier,Catherine Bretonet al. PLoS Computational Biology, 2025, 21 (8), pp.e1013236. ⟨10.1371/journal.pcbi.1013236⟩ Article dans une revue hal-05279437v1
ISMB/ECCB 2023 organization benefited from the strengths of the French bioinformatics community Anna-Sophie Fiston-Lavier,Sandra Dérozier,Guy Perrière,Marie-France Sagot Bioinformatics Advances, 2024, 4 (1), pp.vbae040. ⟨10.1093/bioadv/vbae040⟩ Article dans une revue hal-04684148v1
Effective population size does not explain long-term variation in genome size and transposable element content in animals Alba Marino,Gautier Debaecker,Anna-Sophie Fiston-Lavier,Annabelle Haudry,Benoit Nabholz eLife, In press, ⟨10.7554/eLife.100574.1⟩ Article dans une revue hal-04791560v1
Involving repetitive regions in scaffolding improvement Quentin Delorme,Rémy Costa,Yasmine Mansour,Anna-Sophie Fiston-Lavier,Annie Chateau Journal of Bioinformatics and Computational Biology, 2021, 19 (06), pp.2140016. ⟨10.1142/S0219720021400163⟩ Article dans une revue hal-04954688v1
Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia Xiaowei Zhu,Bo Zhou,Reenal Pattni,Kelly Gleason,Chunfeng Tanet al. Nature Neuroscience, 2021, 24 (2), pp.186-196. ⟨10.1038/s41593-020-00767-4⟩ Article dans une revue hal-04954735v1
A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits L. Hibrand Saint-Oyant,T. Ruttink,L. Hamama,I. Kirov,D. Lakhwaniet al. Nature Plants, 2018, 4 (7), pp.473 - 484. ⟨10.1038/s41477-018-0166-1⟩ Article dans une revue hal-01873309v1
Ancient hybridizations among the ancestral genomes of bread wheat T. Marcussen,S. Sandve,L. Heier,M. Spannagl,M. Pfeiferet al. Science, 2014, 345 (6194), pp.1250092-1250092. ⟨10.1126/science.1250092⟩ Article dans une revue hal-02889053v1
Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations Thierry Rouxel,J. Grandaubert,Jk. Hane,Claire Hoede,Angela P. van de Wouwet al. Nature Communications, 2011, 2, pp.202. ⟨10.1038/ncomms1189⟩ Article dans une revue hal-00841751v1
Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements. E. d'Alençon,H. Sezutsu,Fabrice Legeai,E. Permal,S. Bernard-Samainet al. Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (17), pp.7680-5. ⟨10.1073/pnas.0910413107⟩ Article dans une revue inria-00537908v1
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis F. Martin,A. Aerts,D. Ahrén,A. Brun,E. G. J. Danchinet al. Nature, 2008, 452 (7183), pp.88-93. ⟨10.1038/nature06556⟩ Article dans une revue halsde-00261893v1

Communication dans un congrès (5)

A genomic perspective on population structure and adaptation to aridity in the four-striped mouse Rhabdomys bechuanae in Southern Africa H Keilani,Anna-Sophie Fiston-Lavier,P Caminade,A Loiseau,M Galanet al. Congress of the European Society for Evolutionary Biology (ESEB 2025), Sociedad Española de Biología Evolutiva, Aug 2025, Barcelona, Spain Communication dans un congrès hal-05226826v1
Genomic variations in Cyvirus cyprinidallo3 and their implication for its evolution Nurul Fuandila,Marie-Ka Tilak,Anna-Sophie Fiston-Lavier,Emira Cherif,Munti Yuhanaet al. 3. Joint Conference of the Association of Institutions for Tropical Veterinary Medicine & Society for Tropical Veterinary Medicine, May 2024, Montpellier, France Communication dans un congrès hal-04950572v1
Pangenomic variations and differentiation between the two African malaria vector sister species Anopheles gambiae and Anopheles coluzzii Clothilde Chenal,Corentin Marco,Francois Sabot,Chris S Clarkson,Alistair Mileset al. ESOVE 2024 - 23rd European Society for Vector Ecology Conference, Vectopole Sud; SOVE (Society for Vector Ecology), Oct 2024, Montpellier, France. pp.S1-1 Communication dans un congrès hal-05006323v1
Virulence evolution of Cyprinid herpesvirus 3, a large double-stranded DNA virus Nurul Fuandila,Marie-Ka Tilak,Sandro Klafack,Sven M. Bergmann,Anna-Sophie Fiston-Lavieret al. 21. International Conference on Diseases of Fish and Shellfish, Sep 2023, Aberdeen, United Kingdom Communication dans un congrès hal-04950575v1
Le projet d'innovation pédagogique BILL Anna-Sophie Fiston-Lavier,Anne-Sophie Gosselin-Grenet,Jean-Christophe Avarre Montpellier Omics Days, Feb 2023, Montpellier, France Communication dans un congrès hal-04950566v1

Poster de conférence (1)

Impact of structural variation turnover in the rapid in vitro evolution of Cyprinid herpesvirus 3, a large double-stranded DNA virus Nurul Fuandila,Marie-Ka Tilak,Sven M. Bergmann,Anna-Sophie Fiston-Lavier,Anne-Sophie Gosselin-Grenetet al. 18th Ecology & Evolution of Infectious Diseases meeting, Jun 2021, Montpellier, France Poster de conférence hal-04950580v1

Pré-publication, Document de travail (2)

Manual versus automatic annotation of transposable elements: case studies in Drosophila melanogaster and Aedes albopictus , balancing accuracy and biological relevance Tomas Carrasco-Valenzuela,Alba Marino,Jessica M Storer,Iago Bonnici,Camila J Mazzoniet al. 2025 Pré-publication, Document de travail hal-05389036v1
Role of aridity in shaping adaptive genomic divergence and population connectivity in a Southern African rodent Hamilcar Socrates Keilani,Anna-Sophie Fiston-Lavier,Pierre Caminade,Anne Loiseau,Maxime Galanet al. 2025 Pré-publication, Document de travail hal-05368585v1