Audrey Onfroy

Identifiants chercheurs

IdHAL :

audrey-onfroy

ORCID :

0009-0003-1429-4230

Publications

Communication dans un congrès (2)

Twelve Tips for Reproducible Analysis of Single-Cell Transcriptomics Data (slides) Audrey Onfroy,Piotr Topilko,Sophie Hüe,Denis Thieffry 2025 ACM Conference on Reproducibility and Replicability, Association for Computing Machinery (ACM), Jul 2025, Vancouver, Canada Communication dans un congrès hal-05190482v1
Twelve Tips for Reproducible Analysis of Single-Cell Transcriptomics Data (slides) Audrey Onfroy,Piotr Topilko,Sophie Hüe,Denis Thieffry Wébinaire du groupe thématique “Single Cell et transcriptomique spatiale” du réseau MERIT, May 2025, Online, France Communication dans un congrès hal-05080173v1

Poster de conférence (6)

Towards reproducible single-cell transcriptomics analysis Audrey Onfroy,Piotr Topilko,Sophie Hüe,Denis Thieffry JOBIM 2025, Jul 2025, Bordeaux, France. 2025 Poster de conférence hal-05134733v1
Glial-to-mesenchymal transition drives malignant progression of plexiform neurofibromas in a mouse model of NF1 Audrey Onfroy,Katarzyna J. Radomska,Laure Lecerf,Bastien Job,Aurélien Beaudeet al. 2024 NF Conference, Jun 2024, Brussels, Belgium. 2024 Poster de conférence hal-05055379v1
NF1 genetic background in the tumor micro-environment governs transcriptomic landscape of tumor cells in malignant peripheral nerve sheath tumors Audrey Onfroy,Fanny Coulpier,Katarzyna J. Radomska,Denis Thieffry,Piotr Topilko 2023 NF Conference, Jun 2023, Scottsdale, United States. 2023 Poster de conférence hal-05055377v1
Deciphering mechanisms driving malignant transformation in Neurofibromatosis Type I, from single-cell transcriptomics Audrey Onfroy,Fanny Coulpier,Katarzyna J. Radomska,Denis Thieffry,Piotr Topilko Doctoral School Day - 2022, Oct 2022, Créteil, France Poster de conférence hal-05055374v1
scRNA-seq with Nanopore sequencing: benchmark of approaches based on hybrid sequencing Ali Hamraoui,Catherine Sénamaud-Beaufort,Audrey Onfroy,Stéphane Le Crom,Morgane Thomas-Chollieret al. jobim 2022, Jul 2022, Rennes (Campus de Beaulieu), France. Poster de conférence hal-05144874v1
Method for single-cell level cell-type annotation using marker genes, in scRNA-Seq data Audrey Onfroy,Fanny Coulpier,Katarzyna J. Radomska,Denis Thieffry,Piotr Topilko JOBIM 2022, Jul 2022, Rennes, France. 2022 Poster de conférence hal-05055376v1

Article dans une revue (1)

Hair follicle stem cell fate supports distinct clinical endotypes in hidradenitis suppurativa Audrey Onfroy,Francette Jean-Louis,Philippe Le Corvoisier,Fanny Coulpier,Kevin Muretet al. Journal of the European Academy of Dermatology and Venereology, 2025, ⟨10.1111/jdv.70152⟩ Article dans une revue hal-05134707v2

Pré-publication, Document de travail (2)

A systematic benchmark of bioinformatics methods for single-cell and spatial RNA-seq Nanopore long-read data Ali Hamraoui,Audrey Onfroy,Catherine Sénamaud-Beaufort,Fanny Coulpier,Sophie Lemoineet al. 2025 Pré-publication, Document de travail hal-05190995v1
Exploring the mechanisms governing the initiation of plexiform neurofibromas using Prss56Cre, Nf1-KO mouse model at a single-cell resolution Myriam Mansour,Audrey Onfroy,Fanny Coulpier,Katarzyna Radomska,Pierre Wolkensteinet al. 2025 Pré-publication, Document de travail (preprint/prepublication) hal-05155736v1

Thèse (1)

Deciphering cellular and molecular mechanisms driving malignant transformation in Neurofibromatosis Type 1 using a reproducible computational workflow for single-cell transcriptomics Audrey Onfroy Bioinformatics [q-bio.QM]. Paris 12, 2024. English. ⟨NNT : 2024PA120090⟩ Thèse tel-05293125v1