Benjamin Brachi CRCN dans l'UMR INRAE BIOGECOco-responsable du collectif E4E

Identifiants chercheurs

IdHAL :

bbrachi

ORCID :

0000-0001-5988-7150

IdRef :

146238834

Publications

Article dans une revue (24)

Reduced within-population quantitative genetic variation is associated with climate harshness in maritime pine Juliette Archambeau,Marta Benito-Garzón,Marina de Miguel,Benjamin Brachi,Frederic Barraquandet al. Heredity, In press, ⟨10.1038/s41437-023-00622-9⟩ Article dans une revue hal-04101611v1
Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints Grégoire Le Provost,Benjamin Brachi,Isabelle Lesur,Céline Lalanne,Karine Labadieet al. Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩ Article dans une revue hal-03771214v1
Plant genetic effects on microbial hubs impact host fitness in repeated field trials Benjamin Brachi,Daniele Filiault,Hannah Whitehurst,Paul Darme,Pierre Le Garset al. Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (30), pp.1-12. ⟨10.1073/pnas.2201285119/-/DCSupplemental⟩ Article dans une revue hal-03778825v1
Assessing the potential to harness the microbiome through plant genetics Joy Bergelson,Benjamin Brachi,Fabrice Roux,Fabienne Vailleau Current Opinion in Biotechnology, 2021, 70, pp.167-173. ⟨10.1016/j.copbio.2021.05.007⟩ Article dans une revue hal-03282418v1
Oak genotype and phenolic compounds differently affect the performance of two insect herbivores with contrasting diet breadth Thomas Damestoy,Benjamin Brachi,Xoaquín Moreira,Herve Jactel,Christophe Plomionet al. Tree Physiology, 2019, 39 (4), pp.615-627. ⟨10.1093/treephys/tpy149⟩ Article dans une revue hal-02617788v1
Genome-wide association studies on the phyllosphere microbiome: Embracing complexity in host-microbe interactions Kathleen Beilsmith,Manus P.M. Thoen,Benjamin Brachi,Andrew D. Gloss,Mohammad H. Khanet al. The Plant Journal, 2019, 97 (1), pp.164-181. ⟨10.1111/tpj.14170⟩ Article dans une revue hal-02626936v1
The genetics of exapted resistance to two exotic pathogens in pedunculate oak Jérôme Bartholome,Benjamin Brachi,Benoit Marçais,Amira Mougou,Catherine Bodeneset al. New Phytologist, 2019, online first, pp.1-16. ⟨10.1111/nph.16319⟩ Article dans une revue hal-02619694v1
Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot Jia-Hui Chen,Yuan Huang,Benjamin Brachi,Quan-Zheng Yun,Wei Zhanget al. Nature Communications, 2019, 10 (1), pp.1-12. ⟨10.1038/s41467-019-13128-y⟩ Article dans une revue hal-02619675v1
Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies Fabienne van Rossum,Hélène Martin,Solenn Le Cadre,Benjamin Brachi,Maarten J.M. Christenhuszet al. Perspectives in Plant Ecology, Evolution and Systematics, 2018, 35, pp.44-51. ⟨10.1016/j.ppees.2018.10.003⟩ Article dans une revue hal-02621000v1
The rate and potential relevance of new mutations in a colonizing plant lineage Moises Exposito-Alonso,Claude Becker,Verena J. Schuenemann,Ella Reiter,Claudia Setzeret al. PLoS Genetics, 2018, 14 (2), pp.1-21. ⟨10.1371/journal.pgen.1007155⟩ Article dans une revue hal-02625418v1
Oak genome reveals facets of long lifespan Christophe Plomion,Jean-Marc Aury,Joelle Amselem,Thibault Leroy,Florent Muratet al. Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩ Article dans une revue hal-01820559v1
Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana Benjamin Brachi,Christopher G Meyer,Romain Villoutreix,Alexander Platt,Timothy C Mortonet al. Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (13), pp.4032-4037. ⟨10.1073/pnas.1421416112⟩ Article dans une revue hal-01134027v1
Genome-wide association mapping of flowering time in Arabidopsis thaliana in nature: genetics for underlying components and reaction norms across two successive years. Benjamin Brachi,N. Faure,J. Bergelson,J. Cuguen,F. Roux Acta Botanica Gallica, 2013, 160 (3-4), pp.205-219. ⟨10.1080/12538078.2013.807302⟩ Article dans une revue hal-01110775v1
Investigation of the geographical scale of adaptive phenological variation and its underlying genetics in Arabidopsis thaliana Benjamin Brachi,R. Villoutreix,N. Faure,Hautekèete N.-C.,Y. Piquotet al. Molecular Ecology, 2013, 22 (16), pp.4222-4240. ⟨10.1111/mec.12396⟩ Article dans une revue istex hal-00860399v1
Adaptive value of phenological traits in stressful environments: predictions based on seed production and laboratory natural selection Benjamin Brachi,Carole Aimé,C. Glorieux,J. Cuguen,F. Roux PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩ Article dans une revue hal-00685041v1
Adaptive Value of Phenological Traits in Stressful Environments: Predictions Based on Seed Production and Laboratory Natural Selection Carla Aimé,Benjamin Brachi,Cédric Glorieux,Joël Cuguen,Fabrice Roux PLoS ONE, 2012, 7 (3), pp.e32069. ⟨10.1371/journal.pone.0032069⟩ Article dans une revue hal-03114034v1
Adaptation to climate across the Arabidopsis thaliana genome. Hancock A.M.,Benjamin Brachi,N. Faure,Horton M.W.,Jarymowycz L.B.et al. Science, 2011, 334, pp.83-86. ⟨10.1126/science.1209244⟩ Article dans une revue hal-00644384v1
Genome-wide association studies in plants: the missing heritability is in the field Benjamin Brachi,Geoffrey P. Morris,Justin O. Borevitz Genome Biology, 2011, 12 (10), pp.1-8. ⟨10.1186/gb-2011-12-10-232⟩ Article dans une revue hal-02649561v1
Genetic determination of male sterility in gynodioecious Silene nutans C. Garraud,Benjamin Brachi,Mathilde Dufaÿ,Pascal Touzet,J.A. Shykoff Heredity, 2011, 106 (5), pp.757-764. ⟨10.1038/hdy.2010.116⟩ Article dans une revue hal-00563571v1
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines Susanna Atwell,Yu S. Huang,Bjarni J. Vilhjálmsson,Glenda Willems,Matthew Hortonet al. Nature, 2010, 465 (7298), pp.627-631. ⟨10.1038/nature08800⟩ Article dans une revue hal-02668838v1
Genome-wide association study of 107 phenotypes in a common set of Arabidopsis thaliana inbred lines S. Atwell,Huang Y.S.,Vilhjalmsson B.J.,G. Willems,M. Hortonet al. Nature, 2010, 465, pp.627-631 Article dans une revue hal-00468440v1
Gender variation and inbreeding depression in gynodioecious-gynomonoeicous Silene nutans (Caryophyllaceae) Mathilde Dufaÿ,E. Lahiani,Benjamin Brachi International Journal of Plant Sciences, 2010, 171, pp.53-62 Article dans une revue hal-00418794v1
Gender variation and inbreeding depression in gynodioecious‐gynomonoecious silene nutans (Caryophyllaceae) Mathilde Dufaÿ,Emna Lahiani,Benjamin Brachi International Journal of Plant Sciences, 2010, 171 (1), pp.53-62. ⟨10.1086/647916⟩ Article dans une revue hal-02663358v1
Linkage and association mapping of Arabidopsis thaliana flowering time in nature Benjamin Brachi,N. Faure,M. Horton,E. Flahauw,A. Vazquezet al. PLoS Genetics, 2010, 6 (5), pp.e1000940. ⟨10.1371/journal.pgen.1000940⟩ Article dans une revue hal-00468455v1

Pré-publication, Document de travail (6)

Life-history trade-offs explain local adaptation in Arabidopsis thaliana Benjamin Brachi,Danièle L Filiault,Rahul Pisupati,Tal Dahan-Meir,Anna Igolkinaet al. 2025 Pré-publication, Document de travail hal-05305898v1
Species-specific epigenetic responses to drought stress of two sympatric oak species reflect their ecological preferences. Bernadette Rubio,Gregoire Le Provost,Benjamin Brachi,Theo Gerardin,Oliver Brendelet al. 2023 Pré-publication, Document de travail hal-04222909v1
Extensive variation of leaf specialized metabolite production in sessile oak ( Quercus petraea ) populations is to a large extent genetically determined but not locally adaptive Domitille Coq--Etchegaray,Stéphane Bernillon,Grégoire Le-Provost,Antoine Kremer,Alexis Ducoussoet al. 2023 Pré-publication, Document de travail hal-04144753v1
Extreme climatic events but not environmental heterogeneity shape within-population genetic variation in maritime pine Juliette Archambeau,Marta Benito-Garzón,Marina de Miguel Vega,Benjamin Brachi,Frédéric Barraquandet al. 2021 Pré-publication, Document de travail (preprint/prepublication) hal-03372229v1
Water stress-associated isolation barriers between two sympatric oak species Grégoire Le Provost,Benjamin Brachi,Isabelle Lesur,Céline Lalanne,Karine Labadieet al. 2021 Pré-publication, Document de travail (preprint/prepublication) hal-03351973v1
Genetic variants affecting plant size and chemical defenses jointly shape herbivory in Arabidopsis Andrew D Gloss,Benjamin Brachi,Mitchell J Feldmann,Simon C Groen,Claudia Bartoliet al. 2023 Pré-publication, Document de travail hal-02947607v1

Communication dans un congrès (4)

Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations Domitille Coq--Etchegaray,Stéphane Bernillon,Grégoire Le Provost,Antoine Kremer,Alexis Ducoussoet al. 2. EvolTree Conference, Alexandru Lucian Curtu, UNITBV ; Elena Ciocirlan, UNITBV ; Nicolae Sofletea, UNITBV, Sep 2023, Brasov, Romania. ⟨10.1101/2023.04.07.536008⟩ Communication dans un congrès hal-04207231v1
Between and within species diversity of water use efficiency for Q. petraea and Q. robur : At the crossroad of ecology, ecophysiology and genetics Oliver Brendel,Didier Le Thiec,David Cohen,Cyril Buré,Theo Gerardinet al. INUPRAG Symposium on Integrative Plant Biology, Umea Plant Science Centre Suede, Feb 2023, Umea, Sweden Communication dans un congrès hal-05248503v1
Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea) Domitille Coq--Etchegaray,Stéphane Bernillon,Grégoire Le Provost,Antoine Kremer,Alexis Ducoussoet al. Congress of the European Society for Evolutionary Biology (ESEB), Lukáš Kratochvíl, Aug 2019, Prague (Czech Republic), Czech Republic Communication dans un congrès hal-04144342v1
Genetic architecture of water use efficiency across two oak species and their hybrids Oliver Brendel,Benjamin Brachi,Catherine Bodenes-Brezard,Patricia Faivre-Rampant,Christophe Plomion Workshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shanghai, China Communication dans un congrès hal-02786594v1

Poster de conférence (1)

Annotation of oak leaf metabolome for genetic and ecological studies Stéphane Bernillon,Grégoire Leprovost,Céline Lalanne,Annick Moing,Benjamin Brachi 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P11, 2018, 11. Journées Scientifiques du RFMF Poster de conférence hal-03125656v1