benjamin linard
Présentation
Publications
Publications
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Simplified pangenome graph traversals with PSSM scoring : search for motifs differentialsMethods for Interfacing with Graphs of Genomic Sequences, camille marchet; guillaume gautreau, Sep 2024, Lille, France |
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Towards an edit distance between pangenome graphsSeqBIM 2023 - Journées sur les Séquences en Bioinformatique, Informatique et Mathématiques, Nov 2023, Lille, France. pp.1-2 |
Rapid alignment-free phylogenec placement via ancestral k-mersMCEB: Mathematical and Computational Evolutionary Biology, Jun 2018, St Martin de Londres, France |
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MSpangepop: Simulating complex structural variants under advanced demographic scenarios using the coalescentJOBIM 2025 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2025, Bordeaux, France. pp.1-1, 2025 |
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Benchmarking pangenome graph mapping with strobemer-based seedingJOBIM 2024JOBIM 2024, Jun 2024, JOBIM 2024, France |
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Simplified pangenome graph traversals with PSSM scoring : search for motifs differentialsJOBIM 2024, Jun 2024, Toulouse, France |
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Benchmarking read mapping on pangenomic variation graphsjobim 2023, Jun 2023, Nice, France |
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A roadmap for the adoption of pangenomics in agronomy2025 |
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Building pangenomes for domesticated and wild tree species: genomic complexity and strategies2026 |
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Bioinfomics days : introduction to variation graphs2024 |
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Rapid alignment-free phylogenetic identification of metagenomic sequences2019 |
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EvoKEN: evolutionary knowledge extraction in networks2017 |
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Development of evolutionary knowledge extraction methods and their application in biological complex systemsBiochemistry, Molecular Biology. Université de Strasbourg, 2012. English. ⟨NNT : 2012STRAJ044⟩ |