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Benjamin Misson

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**Maître de Conférences - HDR - 67ème section CNU** ***Activités de recherche*** Thématiques de recherche actuelles principales : - Contribution des pressions anthropiques (contaminations chimiques, perturbations physiques) à l'écologie des communautés microbiennes à l'interface continent-océan - Contributions microbiennes à la biogéochimie des éléments majeurs en zone côtière (matière organique dissoute, macronutriments) et traces (métaux) - Dynamique, structure et diversité des assemblages microbiens (planctoniques, benthiques, souterrains) Mots clés : - Ecologie microbienne - Biodiversité - Biogéochimie - Environnement côtier - Ecologie moléculaire - Cytométrie en flux Modèles biologiques d’intérêt : bactéries, eucaryotes unicellulaires, archées Production scientifique : - 40 articles parus dont 8 en tant que 1er auteur et 9 en tant que co-auteur de doctorants co-encadrés - 4 communcations invitées en congrés et workshops internationaux, > 80 communications orales ou affichées en congrés internationaux et nationaux. Coordination de projets de recherche : - COMICS (2020-2021, Couplage d'approches méta-OMICS pour l'étude approfondie de réponses microbiennes aux perturbations d'origine anthropique en milieu marin côtier, UTLN/TPM : 30.7 k€) - SE.D.RI.PORT. (2017-2020, SEdimenti, Dragaggi, RIschi PORTuali, Interreg Marittimo, 1854.6k€, part UTLN : 220k€, PI : Région Autonome de Sardaigne, coordination UTLN : B. Misson depuis début 2018) - IMPRECI-M² (2016-2017, IMPacts RECIproques entre Microorganismes et Métaux traces en milieu marin côtier : qui contrôle qui ? EC2CO ECODYN+MICROBIEN : 37.8k€) - METOPHYTO (2015-2016, Influence de pollutions MEtalliques multiples représentatives de l’environnement marin côtier TOulonnais sur le picoPHYTOplancton, FR ECCOREV : 7k€) - COMMET (2014, Caractérisation des COMmunautés Microbiennes participant à la biogéochimie du MErcure dans les sédiments de la rade de Toulon : diversité, distribution et réponse aux contaminations métalliques multiples, UTLN/TPM: 15.5k€) Partenaire de projets de recherche : - BISQUE (2022-2023, Influence de la colonne sédimentaire sur la qualité des eaux côtières, FR ECCOREV/ITEM & Actions transverse MIO) - ECODREDGE MED II (2021-2024, Dragage de sédiments portuaires : impacts et perspectives de valorisation, Région Occitanie) - FIRETRACK (2021-2024, Sources and fate of biomass combustion tracers in the ocean, ANR) - BLACK MATTERS (2021, Black Carbon dissous en milieu marin : biodisponibilité potentielle pour les procaryotes hétérotrophes et pouvoir de complexation avec les contaminants chimiques, MIO, 12.2k€) - CARAMBOLE (2020-2021, Caractérisation des apports de COD et de leurs effets sur les communautés biologiques en lacs de haute altitude, EC2CO HYBIGE, 45 k€) - GEREMIA (2018-2021, GEstione dei REflui per il MIglioramento delle Acque portuali, Interreg Marittimo, 1783k€, part UTLN : 383.8k€) - COMMET (2018, MIO, 5k€) - EPIBIOINDIC (2017-2018, Epibiontes des herbiers marins : indicateur de qualité des écosystèmes côtiers? FR ECCOREV, 7k€, part MIO : 2k€ ) - MERITE-Hippocampe (2017-2020, MISTRALS, AT pollutions et contaminants, 200k€) - FOS SEA (2017-2020, Environmental risk assessment of biological fouling control along the Mediterranean coast, ANR, 635k€, part MIO : 134.5k€) - Development of a Quantitative Lab and Field-Based Microbial Tool to Determine Arsenic (2016, MITACS/Campus France, 10k€) - PREVENT (2015-2017, PRotection du littoral méditerranéen: EValuation, surveillancE, conséqueNces, impacT économique et sociétal – Application à la Rade de Toulon, UTLN/TPM/CD83/Région PACA, 188,6k€) - MERMEX (2013-2016, MISTRALS, WP3, action C3A) - DYNAMICS (2012-2015, « Dynamique des communautés microbiennes actuelles et passées dans les sédiments ligériens », Agence de l’eau Loire-Bretagne. (Postdoctorat) - Actions Intégrées Volubilis France-Maroc de 2010 à 2014 sur l’impact des fluctuations climatiques sur le potentiel toxique des proliférations cyanobactériennes dans des écosystèmes aquatiques marocains et français (Doctorat) Financement de ressources humaines : - Contrat doctoral d'établissement (UTLN) 2023-2026 Léopold Matthys (50%) - Contrat doctoral d'établissement (UTLN) 2020-2023 Clara Dignan (50%) - Contrat Postdoctoral ANR FOSSEA Julie Foulon (12 mois) - Contrat Doctoral région PACA 2015-2018 Clément Coclet (33%) - Contrat Doctoral région PACA 2016-2019 Marie Mayer (33%) - Contrat Doctoral région PACA 2017-2020 Nicolas Layglon (33%) - CDD IgE UTLN 2018-2019 Emilie Paséro (10 mois) - CDD IgE UTLN + projet 2019 Nicolas Gallois (9 mois) Encadrement : - 1 chercheuse post-doctorale (Julie Foulon, ANR FOSSEA, 10/2018 – 09/2019) - 2 ATER (Lyria Berdjeb 2017-2018; Elyne Dugény 2021-2023) - 5 doctorants (Clément Coclet, co-encadrant, 11/2015 – 06/2019 ; Marie Mayer, co-encadrant, 11/2016 – 08/2017 démission ; Nicolas Layglon, co-encadrant, 10/2017 - 09/2020; Clara Dignan, co-directeur, 10/2020 - 09/2023; Léopold Matthys, co-directeur, 10/2023 - 09/2026) - 8 stagiaires de M2 (Benjamin Legrand, UBP, 2013 ; Clément Coclet, AMU, 2015 ; Aurélie Portas, AMU, 2018 ; Alexis Canino, AMU, 2019 ; Roxane Dhommée, UTLN, 2019 ; Emma Lavaut, UPVD, 2019 ; Clara Dignan, UPPA, 2020 ; Léopold Matthys, UTLN, 2023) - 5 stagiaires de M1 (Delphine Boulouis, UTLN, 2010, Perrine Delompré, UTLN, 2015 ; Thibaut Cossart, UTLN, 2016 ; Carolane Giraud, UPMC, 2017 ; Simon Gordillo, UTLN, 2022) - 2 stagiaires ingénieure (Jade Céfaï, Polytech Marseille, 2021 ; Margaux Ayasse, UniLaSalle, 2022) - 6 stagiaires de DUT/BUT (Claire Dumortier, UTLN, 2015 ; Mathilde Goidin, UTLN, 2017, Léa Rodrigues, UTLN, 2018 ; Marvin Hilger, UTLN, 2018 ; Canelle Sauvaître, 2021 ; Cassendre Ouvrard, 2022 ; Laura Miquel, 2023) - 2 stagiaires de Licence (Léa Germain, L Physique-Chimie renforcée, UTLN, 2016-2017 ; Philip Poupin, L Biologie, AMU, 2018) ***Responsabilités administratives*** - Co-responsable de l’Axe Transverse CONTAM (Dynamique des contaminants dans le milieu marin) du laboratoire MIO depuis (2018-2023) - Co-responsable de l'action Contaminants de l'équipe MEB du MIO (2018-2023) - Membre élu représentant des enseignants chercheurs au bureau du pôle MEDD de l’UTLN depuis juillet 2018 - Correspondant UTLN auprès du Réseau des Universités Marines depuis 2019 - Animation scientifique à l’EA PROTEE : responsable du cycle de séminaires bi-mensuels « Anim’mardi » entre septembre 2014 et décembre 2017 (49 séminaires organisés). - Représentant suppléant de l’EA PROTEE au conseil de l’axe stratégique (devenu pôle) MEDD de l’UTLN de 2016 à 2017. - Membre élu du conseil de laboratoire de l’EA PROTEE de janvier 2014 à décembre 2017. ***Activités d’enseignement*** Enseignements dispensés actuellement : - biologie et physiologie végétale - inventaires de diversité - fonctionnement de l'environnement marin - conservation des espaces naturels - écologie microbienne - outils moléculaires pour l'étude des communautés - écotoxicologie microbienne Formations universitaires concernées : - BUT Génie Biologique (tronc commun 1ère année, parcours SEE les 3 années) - Master Sciences De la Mer 1ère année et 2ème année Responsabilités pédagogiques : - aide à la réussite en BUT 1 - responsabilité d'UE en BUT : UE 3 (SEE) Gérer les milieux naturels anthropisés - responsabilité de SAé en BUT : SAé 1.2 (Observer différents niveaux d'organisation du vivant), 1.3SEE (Identifier et caractériser des êtres vivants dans leur environnement) et 2.3SEE (Décrire un milieu et sa biodiversité, partenariat avec le Parc National de Port-Cros) - M1 SDM IPA : Ecotoxicologie microbienne ***Expérience professionnele en Recherche et Enseignement*** - Depuis le 1er janvier 2018 : maître de conférences, UTLN, IUT département de génie biologique, MIO (UM110, CNRS, IRD, AMU, UTLN) équipe Microbiologie Environnementale et Biotechnologies (MEB). - Septembre 2013 – décembre 2017 : maître de conférences, UTLN, IUT département génie biologique, PROTEE (EA 3819), équipe Ecologie et Biologie MArines. - Octobre 2012 – août 2013 : post-doctorant, LMGE (UMR CNRS 6023, UBP, Clermont-Ferrand), équipes « Communautés microbiennes : écotoxicologie, santé » (CMES) et « Interactions dans les réseaux trophiques aquatiques » (IRTA). - Octobre 2011 – août 2012 : Attaché temporaire d’enseignement et de recherche (temps plein) –Université Blaise Pascal (UBP), UFR Sciences et Technologies, département de Biologie, LMGE, équipe CMES. - Octobre 2008 – juin 2011 : enseignant vacataire, UBP et Université d’Auvergne. (205,5h eq. TD). ***Formation Universitaire*** - Novembre 2019 : Habilitation à diriger des recherches - UTLN. Titre : Ecologie de populations et communautés microbiennes dans l’eau et les sédiments d’environnements aquatiques sous forte pression anthropique. - octobre 2008 – octobre 2011 : Thèse de doctorat d’écologie - UBP (soutenue le 19 octobre 2011) - Sujet : « Potentiel toxique et structure génétique de populations de Microcystis en relation avec les différentes phases de son cycle de vie » - Directeurs de thèse : Christian Amblard (DR, UMR CNRS 6023, LMGE) et Delphine Latour (MCF, UBP, LMGE) - Financement : Allocation de recherche du Ministère de l’Enseignement Supérieur et de la Recherche, obtenue par voie de concours, classé 2/26 par l’école doctorale. - 2007-2008 : Master 2 recherche spécialité « Biologie et Fonctionnement des Ecosystèmes », UBP. Mention Bien, classé 1er/11. Obtention d’une bourse de mérite, sur la base des résultats universitaires. Stage de recherche (6 mois) réalisé au LMGE sur le sujet : « Impact des microcystines sur le recrutement benthique de la cyanobactérie Microcystis ». - 2006-2007 : Master 1 « Biologie des Peuplements et des Ecosystèmes », UBP. Mention Bien, classé 1er/26 - Stage de recherche (3 mois) réalisé au LMGE sur le sujet : « Influence de la compétition alimentaire interspécifique entre espèces piscicoles du Haut-Allier sur la croissance des juvéniles du Saumon Atlantique Salmo salar ». - 2005-2006 : Licence Biologie parcours Environnement, UBP. Mention Assez-Bien, classé 16ème/234 - 2003-2005 : DEUG Biologie, parcours Sciences de la Vie, UBP. Mention Assez-Bien.
**Senior Lecturer - HDR - 67th section CNU*** (France) ***Research activities Main current research topics : - Contribution of anthropogenic pressures (chemical contamination, physical disturbances) to the ecology of microbial communities at the continent-ocean interface - Microbial contributions to the biogeochemistry of major elements in coastal zones (dissolved organic matter, macronutrients) and trace elements (metals) - Dynamics, structure and diversity of microbial assemblages (planktonic, benthic, subterranean) Key words : - Microbial ecology - Biodiversity - Biogeochemistry - Coastal environment - Molecular ecology - Flow cytometry Biological models of interest: bacteria, unicellular eukaryotes, archaea Scientific output : - 40 articles published, including 8 as 1st author and 9 as co-author of co-supervised PhD students - 4 invited talks at international conferences and workshops, > 80 oral or poster presentations at international and national conferences. Coordination of research projects: - COMICS (2020-2021, Coupling of meta-OMICS approaches for the in-depth study of microbial responses to anthropogenic disturbances in the coastal marine environment, UTLN/TPM: 30.7 k€) - SE.D.RI.PORT (2017-2020, SEdimenti, Dragaggi, RIschi PORTuali, Interreg Marittimo, 1854.6k€, UTLN share: 220k€, PI: Autonomous Region of Sardinia, UTLN coordination: B. Misson since early 2018) - IMPRECI-M² (2016-2017, Reciproqual impacts between microorganisms and trace metals in the marine coastal environment. EC2CO ECODYN+MICROBIEN: €37.8k) - METOPHYTO (2015-2016, Influence of multiple metallic pollutions representative from Toulon Bay on picophytoplankton, FR ECCOREV: 7k€) - COMMET (2014, Characterisation of the Microbial Communities involved in the biogeochemistry of MErcury in the sediments of Toulon Bay: diversity, distribution and response to multiple metal contaminations, UTLN/TPM: 15.5k€) Partner in research projects : - BISQUE (2022-2023, Influence of the sedimentary column on the quality of coastal waters, FR ECCOREV/ITEM & Actions transverse MIO) - ECODREDGE MED II (2021-2024, Dredging of port sediments: impacts and prospects for recovery, Occitanie Region) - FIRETRACK (2021-2024, Sources and fate of biomass combustion tracers in the ocean, ANR) - BLACK MATTERS (2021, Dissolved black carbon in the marine environment: potential bioavailability for heterotrophic prokaryotes and complexation capacity with chemical contaminants, MIO, €12.2k) - CARAMBOLE (2020-2021, Characterisation of DOC inputs and their effects on biological communities in high-altitude lakes, EC2CO HYBIGE, 45 k€) - GEREMIA (2018-2021, GEstione dei REflui per il MIglioramento delle Acque portuali, Interreg Marittimo, €1783k, UTLN share: €383.8k) - COMMET (2018, MIO, €5k) - EPIBIOINDIC (2017-2018, Epibiontes des herbiers marins : indicateur de qualité des écosystèmes côtiers? FR ECCOREV, €7k, MIO share: €2k ) - MERITE-Hippocampe (2017-2020, MISTRALS, AT pollutions and contaminants, €200k) - FOS SEA (2017-2020, Environmental risk assessment of biological fouling control along the Mediterranean coast, ANR, €635k, MIO part: €134.5k) - Development of a Quantitative Lab and Field-Based Microbial Tool to Determine Arsenic (2016, MITACS/Campus France, €10k) - PREVENT (2015-2017, PRotection du littoral méditerranéen: EValuation, surveillancE, conséqueNces, impacT économique et sociétal - Application à la Rade de Toulon, UTLN/TPM/CD83/Région PACA, 188,6k€) - MERMEX (2013-2016, MISTRALS, WP3, action C3A) - DYNAMICS (2012-2015, "Dynamics of present and past microbial communities in Loire sediments", Agence de l'eau Loire-Bretagne (Post-doctorate)) - Volubilis France-Morocco Integrated Actions from 2010 to 2014 on the impact of climate fluctuations on the toxic potential of cyanobacterial blooms in Moroccan and French aquatic ecosystems (PhD) Human resources funding: - Doctoral contract (UTLN) 2023-2026 Léopold Matthys (50%) - Doctoral contract (UTLN) 2020-2023 Clara Dignan (50%) - ANR FOSSEA postdoctoral contract Julie Foulon (12 months) - Doctoral contract PACA region 2015-2018 Clément Coclet (33%) - Doctoral contract PACA region 2016-2019 Marie Mayer (33%) - Doctoral contract PACA region 2017-2020 Nicolas Layglon (33%) - CDD IgE UTLN 2018-2019 Emilie Paséro (10 months) - CDD IgE UTLN + 2019 project Nicolas Gallois (9 months) Supervision : - 1 post-doctoral researcher (Julie Foulon, ANR FOSSEA, 10/2018 - 09/2019) - 2 ATER (Lyria Berdjeb 2017-2018; Elyne Dugény 2021-2023) - 5 PhD students (Clément Coclet, co-supervisor, 11/2015 - 06/2019; Marie Mayer, co-supervisor, 11/2016 - 08/2017 resignation; Nicolas Layglon, co-supervisor, 10/2017 - 09/2020; Clara Dignan, co-supervisor, 10/2020 - 09/2023; Léopold Matthys, co-supervisor, 10/2023 - 09/2026) - 8 M2 interns (Benjamin Legrand, UBP, 2013; Clément Coclet, AMU, 2015; Aurélie Portas, AMU, 2018; Alexis Canino, AMU, 2019; Roxane Dhommée, UTLN, 2019; Emma Lavaut, UPVD, 2019; Clara Dignan, UPPA, 2020; Léopold Matthys, UTLN, 2023) - 5 M1 trainees (Delphine Boulouis, UTLN, 2010, Perrine Delompré, UTLN, 2015 ; Thibaut Cossart, UTLN, 2016 ; Carolane Giraud, UPMC, 2017 ; Simon Gordillo, UTLN, 2022) - 2 engineering interns (Jade Céfaï, Polytech Marseille, 2021; Margaux Ayasse, UniLaSalle, 2022) - 6 DUT/BUT trainees (Claire Dumortier, UTLN, 2015; Mathilde Goidin, UTLN, 2017, Léa Rodrigues, UTLN, 2018; Marvin Hilger, UTLN, 2018; Canelle Sauvaître, 2021; Cassendre Ouvrard, 2022; Laura Miquel, 2023) - 2 Licence trainees (Léa Germain, L Physique-Chimie renforcée, UTLN, 2016-2017; Philip Poupin, L Biologie, AMU, 2018) ***Administrative responsibilities*** - Co-leader of the CONTAM cross-teams theme (Dynamics of contaminants in the marine environment) of the MIO laboratory (2018-2023) - Co-leader of the MIO MEB team's Contaminants action (2018-2023) - Elected member representing teacher-researchers on the board of the UTLN MEDD cluster since July 2018 - UTLN correspondent for the French Marine Universities Network since 2019 - Scientific coordinator at EA PROTEE: responsible for the "Anim'mardi" bi-monthly seminar cycle between September 2014 and December 2017 (49 seminars organised). - Alternate representative of EA PROTEE on the board of the UTLN MEDD strategic axis (now cluster) from 2016 to 2017. - Elected member of the EA PROTEE laboratory council from January 2014 to December 2017. ***Teaching activities*** Current teaching activities: - plant biology and physiology - diversity inventories - functioning of the marine environment - conservation of natural areas - microbial ecology - molecular tools for studying communities - microbial ecotoxicology University courses concerned: - BUT Biological Engineering (common core 1st year, Environmental Sciences and Ecotechnologies (SEE) specialty for the 3 years) - 1st and 2nd year Masters in Marine Sciences Teaching responsibilities : - helping students to succeed in 1st year BUT - Responsibility for teaching units in BUT: UE 3 (SEE) Managing anthropised natural environments - Responsibility for student's projects in BUT: SAE 1.2 (Observe different levels of organisation of living organisms), 1.3SEE (Identify and characterise living organisms in their environment) and 2.3SEE (Describe an environment and its biodiversity, partnership with the National Park of Port-Cros) - Responsibility for teaching units in Masters degree: Microbial Ecotoxicology ***Professional experience in Research and Teaching*** - Since 1 January 2018: Senior Lecturer, UTLN, IUT Department of Biological Engineering, MIO (UM110, CNRS, IRD, AMU, UTLN) Environmental Microbiology and Biotechnology team (MEB). - September 2013 - December 2017: senior lecturer, UTLN, IUT biological engineering department, PROTEE (EA 3819), Ecology and Biology MArines team. - October 2012 - August 2013: post-doctoral fellow, LMGE (UMR CNRS 6023, UBP, Clermont-Ferrand), "Microbial communities: ecotoxicology, health" (CMES) and "Interactions in aquatic food webs" (IRTA) teams. - October 2011 - August 2012: Temporary teaching and research assistant (full-time) -Université Blaise Pascal (UBP), UFR Sciences et Technologies, Biology Department, LMGE, CMES team. - October 2008 - June 2011: temporary lecturer, UBP and Université d'Auvergne. (205.5h eq. TD). ***University training*** - November 2019: Habilitation to direct research - UTLN. Title: Ecology of microbial populations and communities in water and sediments in aquatic environments under strong anthropic pressure. - October 2008 - October 2011: PhD thesis in ecology - UBP (defended on 19 October 2011) - Subject: "Toxic potential and genetic structure of Microcystis populations in relation to the different phases of its life cycle" - Thesis supervisors: Christian Amblard (DR, UMR CNRS 6023, LMGE) and Delphine Latour (MCF, UBP, LMGE) - Funding: Research grant from the Ministry of Higher Education and Research, obtained through a competitive process, ranked 2/26 by the doctoral school. - 2007-2008: Master 2 in research, specialising in "Biology and Functioning of Ecosystems", UBP. First class honours, ranked 1/11. Awarded a merit scholarship based on academic results. Research placement (6 months) at LMGE on the subject: "Impact of microcystins on the benthic recruitment of the cyanobacterium Microcystis". - 2006-2007: Master 1 "Biology of Populations and Ecosystems", UBP. First class honours, ranked 1st/26 - Research placement (3 months) at the LMGE on the subject: "Influence of interspecific food competition between fish species in the Haut-Allier on the growth of juveniles of the Atlantic salmon Salmo salar". - 2005-2006: Bachelor's degree in Biology and Environment, UBP. Honours, ranked 16/234 - 2003-2005: DEUG Biology, Life Sciences course, UBP. Passed with distinction.

Publications

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What happens to biomass burning-emitted particles in the ocean? A laboratory experimental approach based on their tracers

Juan Miguel González-Sánchez , Christos Panagiotopoulos , Candice Antich , Laure Papillon , Nicole Garcia
Science of the Total Environment, 2024, 907, pp.167770. ⟨10.1016/j.scitotenv.2023.167770⟩
Journal articles hal-04268856v1
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Algal‐ and soil‐derived dissolved organic matter shapes bacteria‐phytoplankton interactions in a high‐altitude lake

Flavia Dory , Laurent Cavalli , Evelyne Franquet , France van Wambeke , Benjamin Misson
Freshwater Biology, inPress, ⟨10.1111/fwb.14225⟩
Journal articles hal-04453583v1
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Assessing the diversity of plankton-associated prokaryotes along a size-fraction gradient: A methodological evaluation

Léa Cabrol , Mélanie Delleuze , Arthur Szylit , Guillaume Schwob , Marianne Quemeneur
Marine Pollution Bulletin, 2023, 197, pp.115688. ⟨10.1016/j.marpolbul.2023.115688⟩
Journal articles hal-04383437v1
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An Effect-Based Method to Evaluate Spatio-Temporal Variations of Coastal Marine DOM Properties

Clara Dignan , Véronique Lenoble , Olivier Pringault , Benjamin Misson
Journal of Marine Science and Engineering, 2023, 11 (10), pp.1841. ⟨10.3390/jmse11101841⟩
Journal articles hal-04254404v1
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Planktonic shift with dissolved organic matter properties: a functional perspective for sentinel lakes

Flavia Dory , Laurent Cavalli , Evelyne Franquet , Stéphane Mounier , Patrick Höhener
Journal of Ecology, 2023, 111 (1), pp.45-61. ⟨10.1111/1365-2745.14013⟩
Journal articles hal-03816119v1
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Prokaryotic Responses to Estuarine Coalescence Contribute to Planktonic Community Assembly in a Mediterranean Nutrient-Rich Estuary

Elisabeth Navarro , Chiara Santinelli , Simona Retelletti Brogi , Gaël Durrieu , Olivier Radakovitch
Journal of Marine Science and Engineering, 2023, 11 (5), pp.933. ⟨10.3390/jmse11050933⟩
Journal articles hal-04254398v1
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Surface Characteristics Together With Environmental Conditions Shape Marine Biofilm Dynamics in Coastal NW Mediterranean Locations

Jean-François Briand , Thomas Pollet , Benjamin Misson , Cédric Garnier , Marlene Lejars
Frontiers in Marine Science, 2022, 8, ⟨10.3389/fmars.2021.746383⟩
Journal articles hal-03608643v1
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Cd transfers during marine sediment resuspension over short and long-term period: Associated risk for coastal water quality

Nicolas Layglon , Véronique Lenoble , Longo Louis , Sébastien d'Onofrio , Stéphane Mounier
Marine Pollution Bulletin, 2022, 180, pp.113771. ⟨10.1016/j.marpolbul.2022.113771⟩
Journal articles hal-03678347v1
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Summer dynamics drive the microbial response to carbon and nutrient additions in a high‐altitude lake

Flavia Dory , Laurent Cavalli , Evelyne Franquet , Magalie Claeys-Bruno , Benjamin Misson
Limnology and Oceanography, 2022, 67 (5), pp.1142-1156. ⟨10.1002/lno.12062⟩
Journal articles hal-03818173v1
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Limited influence of marine sediment lyophilization on prokaryotic community structure assessed via amplicon sequencing: an example from environmentally contrasted sediment layers in Toulon harbor (France)

Benjamin Misson , Cédric Garnier , Alexandre J Poulain
PeerJ, 2021, 9, pp.e11075. ⟨10.7717/peerj.11075⟩
Journal articles hal-03191488v1
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Integration of spatio-temporal variations of surface metabolomes and epibacterial communities highlights the importance of copper stress as a major factor shaping host-microbiota interactions within a Mediterranean seaweed holobiont

Benoît Paix , Nicolas Layglon , Christophe Le Poupon , Sébastien D’onofrio , Benjamin Misson
Microbiome, 2021, 9 (1), ⟨10.1186/s40168-021-01124-8⟩
Journal articles hal-03426129v1
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Metal resistance genes enrichment in marine biofilm communities selected by biocide-containing surfaces in temperate and tropical coastal environments

Elisa C.P. Catao , Nicolas Gallois , Fabienne Fay , Benjamin Misson , Jean-François Briand
Environmental Pollution, 2021, 268, pp.115835. ⟨10.1016/j.envpol.2020.115835⟩
Journal articles hal-03027551v1
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Synergistic effects of temperature and light affect the relationship between Taonia atomaria and its epibacterial community: a controlled conditions study

Benoit Paix , Philippe Potin , Gaëtan Schires , Christophe Le Poupon , B. Misson
Environmental Microbiology, 2021, 23 (11), pp.6777-6797. ⟨10.1111/1462-2920.15758⟩
Journal articles hal-03400714v1
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Trace Metal Contamination Impacts Predicted Functions More Than Structure of Marine Prokaryotic Biofilm Communities in an Anthropized Coastal Area

Clément Coclet , Cédric Garnier , Sébastien d'Onofrio , Gaël Durrieu , Emilie Pasero
Frontiers in Microbiology, 2021, 12, pp.589948. ⟨10.3389/fmicb.2021.589948⟩
Journal articles hal-03148203v1
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Elutriate preparation affects embryo development test with Paracentrotus lividus: An in-depth study on the differences between two protocols and three different sediment/water mixing times

Davide Sartori , Simona Macchia , Nicolas Layglon , Sébastien d'Onofrio , Benjamin Misson
Ecotoxicology and Environmental Safety, 2021, ⟨10.1016/j.ecoenv.2021.112010⟩
Journal articles hal-03148212v1
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DOM Biological Lability in an Estuarine System in Two Contrasting Periods

Simona Retelletti Brogi , Raffaella Casotti , Benjamin Misson , Cecilia Balestra , Margherita Gonnelli
Journal of Marine Science and Engineering, 2021, ⟨10.3390/jmse9020172⟩
Journal articles hal-03148207v1
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Negligible microbial heterotrophic quantitative contribution onto trace metals remobilization during marine sediment resuspension - insights from a Mediterranean urbanized bay

Nicolas Layglon , B. Misson , Nicolas Gallois , Sébastien d'Onofrio , V Lenoble
Marine Chemistry, inPress, ⟨10.1016/j.marchem.2021.103981⟩
Journal articles hal-03229764v1
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Microbial consortia in an ice‐covered high‐altitude lake impacted by additions of dissolved organic carbon and nutrients

Flavia Dory , Laurent Cavalli , Evelyne Franquet , B. Misson , Thierry Tatoni
Freshwater Biology, 2021, 66 (8), pp.1648-1662. ⟨10.1111/fwb.13781⟩
Journal articles hal-03375780v1
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Dissolved organic matter controls of arsenic bioavailability to bacteria

Martin Pothier , Véronique Lenoble , Cédric Garnier , Benjamin Misson , Charlotte Rentmeister
Science of the Total Environment, 2020, 716, pp.137118. ⟨10.1016/j.scitotenv.2020.137118⟩
Journal articles hal-03027565v1
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Long-term monitoring emphasizes impacts of the dredging on dissolved Cu and Pb contamination along with ultraplankton distribution and structure in Toulon Bay (NW Mediterranean Sea, France)

N. Layglon , Benjamin Misson , Gaël Durieu , Clément Coclet , Sébastien d'Onofrio
Marine Pollution Bulletin, 2020, 156, pp.111196. ⟨10.1016/j.marpolbul.2020.111196⟩
Journal articles hal-02571468v1
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Impacts of copper and lead exposure on prokaryotic communities from contaminated contrasted coastal seawaters: the influence of previous metal exposure

Clément Coclet , Cédric Garnier , Gaël Durrieu , Sébastien d'Onofrio , Nicolas Layglon
FEMS Microbiology Ecology, 2020, 96 (6), ⟨10.1093/femsec/fiaa048⟩
Journal articles hal-03027561v1
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Have decades of abiotic studies in sediments been misinterpreted?

N. Layglon , Benjamin Misson , Stéphane Mounier , Véronique Lenoble , Dario Omanović
Science of the Total Environment, 2020, 707, pp.135949. ⟨10.1016/j.scitotenv.2019.135949⟩
Journal articles hal-02409414v1
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A Multi-Omics Analysis Suggests Links Between the Differentiated Surface Metabolome and Epiphytic Microbiota Along the Thallus of a Mediterranean Seaweed Holobiont

Benoît Paix , Nathan Carriot , Raphaëlle Barry-Martinet , Stephane Greff , Benjamin Misson
Frontiers in Microbiology, 2020, 11, pp.494. ⟨10.3389/fmicb.2020.00494⟩
Journal articles hal-02519482v1
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Metabolomic and proteomic changes induced by growth inhibitory concentrations of copper in the biofilm-forming marine bacterium Pseudoalteromonas lipolytica

Laurie Favre , Annick Ortalo-Magné , Lionel Kerloch , Carole Pichereaux , Benjamin Misson
Metallomics, 2019, 11 (11), pp.1887-1899. ⟨10.1039/C9MT00184K⟩
Journal articles hal-02435001v1
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Changes in Bacterioplankton Communities Resulting From Direct and Indirect Interactions With Trace Metal Gradients in an Urbanized Marine Coastal Area

Clément Coclet , Cédric Garnier , Gaël Durrieu , Dario Omanović , Sébastien d'Onofrio
Frontiers in Microbiology, 2019, 10, ⟨10.3389/fmicb.2019.00257⟩
Journal articles hal-02049263v1
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Effects of catchment area and nutrient deposition regime on phytoplankton functionality in alpine lakes

Coralie Jacquemin , Céline Bertrand , Evelyne Franquet , Stéphane Mounier , Benjamin Misson
Science of the Total Environment, 2019, 674, pp.114-127. ⟨10.1016/j.scitotenv.2019.04.117⟩
Journal articles hal-02176058v1
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Shear Stress as a Major Driver of Marine Biofilm Communities in the NW Mediterranean Sea

Elisa C P Catão , Thomas Pollet , Benjamin Misson , Cédric Garnier , Jean-François Ghiglione
Frontiers in Microbiology, 2019, ⟨10.3389/fmicb.2019.01768⟩
Journal articles hal-02269986v1

Trace metal contamination as a toxic and structuring factor impacting ultraphytoplankton communities in a multicontaminated Mediterranean coastal area

Clément Coclet , Cédric Garnier , Floriane Delpy , Dominique Jamet , Gaël Durrieu
Progress in Oceanography, 2018, 163, pp.196 - 213. ⟨10.1016/j.pocean.2017.06.006⟩
Journal articles hal-01791337v1
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Prokaryotic community successions and interactions in marine biofilms: the key role of Flavobacteriia

Thomas Pollet , Lyria Berdjeb , Cédric Garnier , Gaël Durrieu , Christophe Le Poupon
FEMS Microbiology Ecology, 2018, 94 (6), ⟨10.1093/femsec/fiy083⟩
Journal articles hal-02024255v1
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Inhibitory effects of sodium azide on microbial growth in experimental resuspension of marine sediment

Léa Cabrol , Marianne Quemeneur , Benjamin Misson
Journal of Microbiological Methods, 2017, 133, pp.62 - 65. ⟨10.1016/j.mimet.2016.12.021⟩
Journal articles ird-01647866v1

Horizontal distribution of the cell abundance and toxicity of Microcystis in a hypereutrophic Moroccan reservoir

S. Samoudi , D. Latour , J. Robin , M. Sabart , Benjamin Misson
Contemporary Problems of Ecology, 2016, 9 (5), pp.554 - 562. ⟨10.1134/S1995425516050139⟩
Journal articles hal-01826036v1
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Chemical multi-contamination drives benthic prokaryotic diversity in the anthropized Toulon Bay

Benjamin Misson , Cédric Garnier , Béatrice Lauga , Duc Huy Dang , Jean-François Ghiglione
Science of the Total Environment, 2016, 556, pp.319 - 329. ⟨10.1016/j.scitotenv.2016.02.038⟩
Journal articles hal-01826037v1

Genetic diversity along the life cycle of the cyanobacterium M icrocystis : highlight on the complexity of benthic and planktonic interactions

Marion Sabart , Benjamin Misson , Marlène M. Jobard , Gisèle Bronner , Florence Donnadieu-Bernard
Environmental Microbiology, 2015, 17 (3), pp.901 - 911. ⟨10.1111/1462-2920.12555⟩
Journal articles hal-01826039v1

Soil surface colonization by phototrophic indigenous organisms, in two contrasted soils treated by formulated maize herbicide mixtures

Pierre Joly , Benjamin Misson , Fanny Perrière , Frédérique Bonnemoy , Muriel Joly
Ecotoxicology, 2014, 23 (9), pp.1648 - 1658. ⟨10.1007/s10646-014-1304-9⟩
Journal articles hal-01826038v1

Vertical Heterogeneity of Genotypic Structure and Toxic Potential within Populations of the Harmful Cyanobacterium Microcystis aeruginosa

Benjamin Misson , Delphine Latour
Advances in Microbiology, 2013
Journal articles hal-01826041v1

The importance of small colonies in sustaining Microcystis population exposed to mixing conditions: an exploration through colony size, genotypic composition and toxic potential

Benjamin Misson , Marion Sabart , Aurélie Descroix , Emilie Duffaud , Bruno Combourieu
Environmental Microbiology Reports, 2013, pp.n/a - n/a. ⟨10.1111/1758-2229.12077⟩
Journal articles hal-01826042v1

Short- and long-term dynamics of the toxic potential and genotypic structure in benthic populations of Microcystis.

Benjamin Misson , Florence Donnadieu-Bernard , Jean-Jacques Godon , Christian Amblard , Delphine Latour
Water Research, 2012, 46 (5), pp.1438-46. ⟨10.1016/j.watres.2011.11.011⟩
Journal articles hal-00820329v1

Influence of light, sediment mixing, temperature and duration of the benthic life phase on the benthic recruitment of Microcystis

Benjamin Misson , D. Latour
Journal of Plankton Research, 2012, 34 (2), pp.113 - 119. ⟨10.1093/plankt/fbr093⟩
Journal articles hal-01826046v1

Benthic survival of Microcystis: Long-term viability and ability to transcribe microcystin genes

Benjamin Misson , Marion Sabart , Christian Amblard , Delphine Latour
Harmful Algae, 2012, 13, pp.20 - 25. ⟨10.1016/j.hal.2011.09.010⟩
Journal articles hal-01826048v1

INVOLVEMENT OF MICROCYSTINS AND COLONY SIZE IN THE BENTHIC RECRUITMENT OF THE CYANOBACTERIUM MICROCYSTIS (CYANOPHYCEAE)1

Benjamin Misson , Marion Sabart , Christian Amblard , Delphine Latour
European Journal of Phycology, 2011, 47 (1), pp.42 - 51. ⟨10.1111/j.1529-8817.2010.00943.x⟩
Journal articles hal-01826049v1

Involvement of microcystins and colony size in the benthic recruitment of the cyanobacterium Microcystis (Cyanophyceae).

Benjamin Misson , Marion Sabart , Christian Amblard , Delphine Latour
Journal of Phycology, 2011, 47 (1), pp.42-51
Journal articles hal-00820324v1

Fatty acids as biomarkers to indicate main carbon sources of four major invertebrate families in a large River (the Allier, France)

Aurélie Descroix , Alexandre Bec , Gilles Bourdier , Denis Sargos , Jeremy Sauvanet
Fundamental and Applied Limnology, 2010, 177 (1), pp.39 - 55. ⟨10.1127/1863-9135/2010/0177-0039⟩
Journal articles hal-01826050v1

Phytoplankton assemblage shifts with dissolved organic matter properties: a functional perspective for sentinel lakes

Flavia Dory , Laurent Cavalli , Evelyne Franquet , Stéphane Mounier , Patrick Höhener
5ème JILO, Oct 2022, corte, France
Conference poster hal-04555636v1
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Soil photosynthetic microbial communities as bioindicators for pesticide stress assessment

Olivier Crouzet , Pierre Joly , Christelle Marrauld , Frédéric Rimet , Benjamin Misson
1. Global Soil Biodiversity Initiative Conference (GSBI), Dec 2014, Dijon, France. 702 p., 2014, The First Global Soil Biodiversity Conference, december 2-5, 2014, Dijon, France : book of abstracts
Conference poster hal-02738907v1