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Benjamin Petre

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Improving sustainable crop protection using population genetics concepts

Méline Saubin , Clémentine Louet , Lydia Bousset , Frédéric Fabre , Pascal Frey
Molecular Ecology, 2023, 32 (10), pp.2461-2471. ⟨10.1111/mec.16634⟩
Journal articles hal-03394837v2
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A survey of highly influential studies on plant pathogen effectors during the last two decades (2000-2020).

Clémentine Louet , Sébastien Duplessis , Pascal Frey , Benjamin Petre
Frontiers in Plant Science, 2022, 13, pp.920281. ⟨10.3389/fpls.2022.920281⟩
Journal articles hal-03849040v1
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2000-2019: Twenty Years of Highly Influential Publications in Molecular Plant Immunity

Benjamin Petre , Clémentine Louet , Julie Lintz , Sébastien Duplessis
Molecular Plant-Microbe Interactions, 2022, 35 (9), pp.748-754. ⟨10.1094/MPMI-05-22-0112-CR⟩
Journal articles hal-03847643v1

Host Adaptation and Virulence in Heteroecious Rust Fungi

Sébastien Duplessis , Cecile Lorrain , Benjamin Petre , Melania Figueroa , Peter Dodds
Annual Review of Phytopathology, 2021, 59 (1), pp.403-422. ⟨10.1146/annurev-phyto-020620-121149⟩
Journal articles hal-03606036v1
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Toward the Discovery of Host-Defense Peptides in Plants

Benjamin Petre
Frontiers in Immunology, 2020, 11, ⟨10.3389/fimmu.2020.01825⟩
Journal articles hal-03010716v1

Host-specialized transcriptome of plant-associated organisms

Benjamin Petre , Cécile Lorrain , Eva Stukenbrock , Sébastien Duplessis
Current Opinion in Plant Biology, 2020, 56, pp.81-88. ⟨10.1016/j.pbi.2020.04.007⟩
Journal articles hal-02990650v1
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Structural genomics applied to the rust fungus Melampsora larici-populina reveals two candidate effector proteins adopting cystine knot and NTF2-like protein folds

Karine de Guillen , Cécile Lorrain , Pascale Tsan , Philippe Barthe , Benjamin Petre
Scientific Reports, 2019, 9 (1), pp.18084. ⟨10.1038/s41598-019-53816-9⟩
Journal articles hal-02548559v1
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The Rust Fungus Melampsora larici-populina Expresses a Conserved Genetic Program and Distinct Sets of Secreted Protein Genes During Infection of Its Two Host Plants, Larch and Poplar

Cécile Lorrain , Clémence Marchal , Stéphane Hacquard , Christine Delaruelle , Jeremy Petrowski
Molecular Plant-Microbe Interactions, 2018, 31 (7), pp.695-706. ⟨10.1094/MPMI-12-17-0319-R⟩
Journal articles hal-01893935v1

Show me the way

Cécile Lorrain , Benjamin Petre , Sébastien Duplessis
Current Opinion in Microbiology, 2018, 46, pp.19-25. ⟨10.1016/j.mib.2018.01.016⟩
Journal articles hal-02154538v1
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A rust fungal effector binds plant DNA and modulates transcription

Md Bulbul Ahmed , Karen Cristine Gonçalves Dos Santos , Ingrid Benerice Sanchez , Benjamin Petre , Cécile Lorrain
Scientific Reports, 2018, 8 (1), pp.1-14. ⟨10.1038/s41598-018-32825-0⟩
Journal articles hal-02548542v1

Infection assays in Arabidopsis reveal candidate effectors from the poplar rust fungus that promote susceptibility to bacteria and oomycete pathogens

Hugo Germain , David L Joly , Caroline Mireault , Mélodie B Plourde , Claire Letanneur
Molecular Plant Pathology, 2018, 19 (1), pp.191-200. ⟨10.1111/mpp.12514⟩
Journal articles hal-01771813v1

LOCALIZER: subcellular localization prediction of both plant and effector proteins in the plant cell

Jana Sperschneider , Ann-Maree Catanzariti , Kathleen Deboer , Benjamin Petre , Donald M. Gardiner
Scientific Reports, 2017, 7 (1), ⟨10.1038/srep44598⟩
Journal articles hal-02548539v1

An effector of the Irish potato famine pathogen antagonizes a host autophagy cargo receptor

Yasin Dagdas , Khaoula Belhaj , Abbas Maqbool , Angela Chaparro-Garcia , Pooja Pandey
Journal articles hal-02548515v1
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Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies

Benjamin Petre , Diane G O Saunders , Jan Sklenar , Cécile Lorrain , Ksenia V. Krasileva
PLoS ONE, 2016, 11 (2), pp.e0149035. ⟨10.1371/journal.pone.0149035⟩
Journal articles hal-01329212v1

Rust fungal effectors mimic host transit peptides to translocate into chloroplasts

Benjamin Petre , Cécile Lorrain , Diane G.O. Saunders , Joe Win , Jan Sklenar
Cellular Microbiology, 2016, 18 (4), pp.453-465. ⟨10.1111/cmi.12530⟩
Journal articles hal-02548525v1

Emerging oomycete threats to plants and animals

Lida Derevnina , Benjamin Petre , Ronny Kellner , Yasin Dagdas , Mohammad Nasif Sarowar
Philosophical Transactions of the Royal Society B: Biological Sciences, 2016, 371 (1709), pp.20150459. ⟨10.1098/rstb.2015.0459⟩
Journal articles hal-02548521v1

Nine things to know about elicitins

Lida Derevnina , Yasin Dagdas , Juan Carlos de La Concepcion , Aleksandra Bialas , Ronny Kellner
New Phytologist, 2016, 212 (4), pp.888-895. ⟨10.1111/nph.14137⟩
Journal articles hal-02548517v1
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The Poplar Rust-Induced Secreted Protein (RISP) Inhibits the Growth of the Leaf Rust Pathogen Melampsora larici-populina and Triggers Cell Culture Alkalinisation

Benjamin Petre , Arnaud Hecker , Hugo Germain , Pascale Tsan , Jan Sklenar
Frontiers in Plant Science, 2016, 7, pp.e1001732. ⟨10.3389/fpls.2016.00097⟩
Journal articles hal-01579575v1

Phytophthora infestans RXLR-WY Effector AVR3a Associates with Dynamin-Related Protein 2 Required for Endocytosis of the Plant Pattern Recognition Receptor FLS2

Angela Chaparro-Garcia , Simon Schwizer , Jan Sklenar , Kentaro Yoshida , Benjamin Petre
PLoS ONE, 2015, 10 (9), pp.e0137071. ⟨10.1371/journal.pone.0137071⟩
Journal articles hal-02548509v1

Candidate Effector Proteins of the Rust Pathogen Melampsora larici-populina Target Diverse Plant Cell Compartments

Benjamin Petre , Diane G O Saunders , Jan Sklenar , Cécile Lorrain , Joe Win
Molecular Plant-Microbe Interactions, 2015, 28 (6), pp.689-700. ⟨10.1094/MPMI-01-15-0003-R⟩
Journal articles hal-01269166v1

The Top 10 oomycete pathogens in molecular plant pathology

Sophien Kamoun , Oliver Furzer , Jonathan D. G. Jones , Howard S. Judelson , Gul Shad Ali
Molecular Plant Pathology, 2015, 16 (4), pp.413-434. ⟨10.1111/mpp.12190⟩
Journal articles hal-02548510v1
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The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1

Henri Pégeot , Cha San Koh , Benjamin Petre , Sandrine Mathiot , Sébastien Duplessis
Frontiers in Plant Science, 2014, 5, article 712 (15 p.). ⟨10.3389/fpls.2014.00712⟩
Journal articles hal-01521321v1
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Genome analysis of poplar LRR-RLP gene clusters reveals RISP, a defense-related gene coding a candidate endogenous peptide elicitor

Benjamin Petre , Stéphane Hacquard , Sébastien Duplessis , Nicolas Rouhier
Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00111⟩
Journal articles hal-02548502v1
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How do filamentous pathogens deliver effector proteins into plant cells?

Benjamin Petre , Sophien Kamoun
PLoS Biology, 2014, 12 (2), ⟨10.1371/journal.pbio.1001801⟩
Journal articles hal-01268569v1

Effector proteins of rust fungi

Benjamin Petre , David L. Joly , Sébastien Duplessis
Frontiers in Plant Science, 2014, 5, pp.938-47. ⟨10.3389/fpls.2014.00416⟩
Journal articles hal-01579674v1

Effector wisdom

Amy Huei-Yi Lee , Benjamin Petre , David Joly
New Phytologist, 2013, 197 (2), pp.375-377. ⟨10.1111/nph.12058⟩
Journal articles hal-02548496v1
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A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).

Stéphane Hacquard , David L. Joly , Yao-Cheng Lin , Emilie Tisserant , Nicolas Feau
Molecular Plant-Microbe Interactions, 2012, 25 (3), pp.279-293. ⟨10.1094/MPMI-09-11-0238⟩
Journal articles hal-01267890v1
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RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

Benjamin Petre , Emmanuelle Morin , Emilie Tisserant , Stéphane Hacquard , Corinne da Silva
PLoS ONE, 2012, 7 (8), pp.1-12. ⟨10.1371/journal.pone.0044408⟩
Journal articles hal-01267887v1
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Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar

Benjamin Petre , Ian Major , Nicolas Rouhier , Sébastien Duplessis
BMC Plant Biology, 2011, 11 (1), pp.33. ⟨10.1186/1471-2229-11-33⟩
Journal articles hal-02548481v1
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The poplar-poplar rust interaction: insights from genomics and transcriptomics

Stéphane S. Hacquard , Benjamin Petre , Pascal Frey , Arnaud Hecker , Nicolas Rouhier
Journal of Pathogens, 2011, EPUB 2011
Journal articles hal-02642064v1

Towards the identification of novel metal- or thiol-based regulated proteins in plants

Tiphaine Dhalleine , Mathieu Schwartz , Flavien Zannini , Linda de Bont , Jérémy Couturier
International Symposium of the DFG Priority Program 1710 Dynamics of Thiol-based Redox Switches in Cellular Physiology, Mar 2021, e-conference, Germany
Conference papers hal-03197988v1

Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus Melampsora larici-populina

Benjamin Petre , Stéphane S. Hacquard , Antoine Persoons , Emilie Tisserant , Emmanuelle Morin
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Conference papers hal-02801804v1

Les apports de la génomique pour l’étude des familles multigéniques : exemple des thaumatin-like proteins (TLPs) chez le peuplier

Benjamin Petre , Ian Major , Pascal Frey , Francis Martin , Nicolas Rouhier
Séminaire de l’Ecole Doctorale RP2E. Biodiversité, Ingénierie écologique, Jan 2011, Vandoeuvre-lès-Nancy, France. 8 p
Conference papers hal-02746248v1