Benjamin Petre

Publications

Article dans une revue (36)

Melampsora larici-populina homologous effectors Mlp72983 and Mlp52166 display cell-type specific accumulation in Arabidopsis and Populus Snehi Gazal,Karen Cristine Gonçalves dos Santos,Mélodie B Plourde,Caroline Levasseur,Armand Séguinet al. Canadian Journal of Forest Research, 2025, 55, pp.225. ⟨10.1139/cjfr-2024-0225⟩ Article dans une revue hal-05051910v1
Genetically clustered antifungal phytocytokines and receptor protein family members cooperate to trigger plant immune signaling Julie Lintz,Yukihisa Goto,Kyle Bender,Raphaël Bchini,Guillaume Dubrulleet al. Journal of Experimental Botany, 2025, 76 (17), pp.4910-4922. ⟨10.1093/jxb/erae297⟩ Article dans une revue hal-04807116v1
Activation of plant immunity through conversion of a helper NLR homodimer into a resistosome Muniyandi Selvaraj,Amirali Toghani,Hsuan Pai,Yu Sugihara,Jiorgos Koureliset al. PLoS Biology, 2024, 22 (10), pp.e3002868. ⟨10.1371/journal.pbio.3002868⟩ Article dans une revue hal-05051922v1
Improving sustainable crop protection using population genetics concepts Méline Saubin,Clémentine Louet,Lydia Bousset,Frédéric Fabre,Pascal Freyet al. Molecular Ecology, 2023, 32 (10), pp.2461-2471. ⟨10.1111/mec.16634⟩ Article dans une revue (article de synthèse) hal-03394837v2
Enjeux liés à l’enseignement supérieur en pathologie végétale Claire Benezech,Elsa Ballini,Benjamin Petre Phytoma , 2023, 769-770 Article dans une revue hal-04564584v1
2000-2019: Twenty Years of Highly Influential Publications in Molecular Plant Immunity Benjamin Petre,Clémentine Louet,Julie Lintz,Sébastien Duplessis Molecular Plant-Microbe Interactions, 2022, 35 (9), pp.748-754. ⟨10.1094/MPMI-05-22-0112-CR⟩ Article dans une revue hal-03847643v1
A decade after the first Pucciniales genomes: A bibliometric snapshot of (post) genomics studies in three model rust fungi Benjamin Petre,Sébastien Duplessis Frontiers in Microbiology, 2022, 13, pp.989580. ⟨10.3389/fmicb.2022.989580⟩ Article dans une revue hal-03847673v1
A Short Review of Anti-Rust Fungi Peptides: Diversity and Bioassays Julie Lintz,Guillaume Dubrulle,Euan Cawston,Sébastien Duplessis,Benjamin Petre Frontiers in Agronomy, 2022, 4, ⟨10.3389/fagro.2022.966211⟩ Article dans une revue hal-03847666v1
A survey of highly influential studies on plant pathogen effectors during the last two decades (2000-2020). Clémentine Louet,Sébastien Duplessis,Pascal Frey,Benjamin Petre Frontiers in Plant Science, 2022, 13, pp.920281. ⟨10.3389/fpls.2022.920281⟩ Article dans une revue hal-03849040v1
Host Adaptation and Virulence in Heteroecious Rust Fungi Sébastien Duplessis,Cecile Lorrain,Benjamin Petre,Melania Figueroa,Peter Doddset al. Annual Review of Phytopathology, 2021, 59 (1), pp.403-422. ⟨10.1146/annurev-phyto-020620-121149⟩ Article dans une revue hal-03606036v1
Host-specialized transcriptome of plant-associated organisms Benjamin Petre,Cécile Lorrain,Eva Stukenbrock,Sébastien Duplessis Current Opinion in Plant Biology, 2020, 56, pp.81-88. ⟨10.1016/j.pbi.2020.04.007⟩ Article dans une revue hal-02990650v1
Toward the Discovery of Host-Defense Peptides in Plants Benjamin Petre Frontiers in Immunology, 2020, 11, pp.1825. ⟨10.3389/fimmu.2020.01825⟩ Article dans une revue hal-03010716v1
Structural genomics applied to the rust fungus Melampsora larici-populina reveals two candidate effector proteins adopting cystine knot and NTF2-like protein folds Karine de Guillen,Cécile Lorrain,Pascale Tsan,Philippe Barthe,Benjamin Petreet al. Scientific Reports, 2019, 9 (1), pp.18084. ⟨10.1038/s41598-019-53816-9⟩ Article dans une revue hal-02548559v1
Infection assays in Arabidopsis reveal candidate effectors from the poplar rust fungus that promote susceptibility to bacteria and oomycete pathogens Hugo Germain,David L Joly,Caroline Mireault,Mélodie B Plourde,Claire Letanneuret al. Molecular Plant Pathology, 2018, 19 (1), pp.191-200. ⟨10.1111/mpp.12514⟩ Article dans une revue hal-01771813v1
A rust fungal effector binds plant DNA and modulates transcription Md Bulbul Ahmed,Karen Cristine Gonçalves Dos Santos,Ingrid Benerice Sanchez,Benjamin Petre,Cécile Lorrainet al. Scientific Reports, 2018, 8 (1), pp.1-14. ⟨10.1038/s41598-018-32825-0⟩ Article dans une revue hal-02548542v1
Show me the way Cécile Lorrain,Benjamin Petre,Sébastien Duplessis Current Opinion in Microbiology, 2018, 46, pp.19-25. ⟨10.1016/j.mib.2018.01.016⟩ Article dans une revue hal-02154538v1
The Rust Fungus Melampsora larici-populina Expresses a Conserved Genetic Program and Distinct Sets of Secreted Protein Genes During Infection of Its Two Host Plants, Larch and Poplar Cécile Lorrain,Clémence Marchal,Stéphane Hacquard,Christine Delaruelle,Jeremy Petrowskiet al. Molecular Plant-Microbe Interactions, 2018, 31 (7), pp.695-706. ⟨10.1094/MPMI-12-17-0319-R⟩ Article dans une revue hal-01893935v1
LOCALIZER: subcellular localization prediction of both plant and effector proteins in the plant cell Jana Sperschneider,Ann-Maree Catanzariti,Kathleen Deboer,Benjamin Petre,Donald M. Gardineret al. Scientific Reports, 2017, 7 (1), ⟨10.1038/srep44598⟩ Article dans une revue hal-02548539v1
An effector of the Irish potato famine pathogen antagonizes a host autophagy cargo receptor Yasin Dagdas,Khaoula Belhaj,Abbas Maqbool,Angela Chaparro-Garcia,Pooja Pandeyet al. eLife, 2016, 5, ⟨10.7554/eLife.10856⟩ Article dans une revue hal-02548515v1
Rust fungal effectors mimic host transit peptides to translocate into chloroplasts Benjamin Petre,Cécile Lorrain,Diane G.O. Saunders,Joe Win,Jan Sklenaret al. Cellular Microbiology, 2016, 18 (4), pp.453-465. ⟨10.1111/cmi.12530⟩ Article dans une revue hal-02548525v1
Nine things to know about elicitins Lida Derevnina,Yasin Dagdas,Juan Carlos de La Concepcion,Aleksandra Bialas,Ronny Kellneret al. New Phytologist, 2016, 212 (4), pp.888-895. ⟨10.1111/nph.14137⟩ Article dans une revue hal-02548517v1
The Poplar Rust-Induced Secreted Protein (RISP) Inhibits the Growth of the Leaf Rust Pathogen Melampsora larici-populina and Triggers Cell Culture Alkalinisation Benjamin Petre,Arnaud Hecker,Hugo Germain,Pascale Tsan,Jan Sklenaret al. Frontiers in Plant Science, 2016, 7, pp.e1001732. ⟨10.3389/fpls.2016.00097⟩ Article dans une revue hal-01579575v1
Emerging oomycete threats to plants and animals Lida Derevnina,Benjamin Petre,Ronny Kellner,Yasin Dagdas,Mohammad Nasif Sarowaret al. Philosophical Transactions of the Royal Society B: Biological Sciences, 2016, 371 (1709), pp.20150459. ⟨10.1098/rstb.2015.0459⟩ Article dans une revue hal-02548521v1
Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies Benjamin Petre,Diane G O Saunders,Jan Sklenar,Cécile Lorrain,Ksenia V. Krasilevaet al. PLoS ONE, 2016, 11 (2), pp.e0149035. ⟨10.1371/journal.pone.0149035⟩ Article dans une revue hal-01329212v1
Phytophthora infestans RXLR-WY Effector AVR3a Associates with Dynamin-Related Protein 2 Required for Endocytosis of the Plant Pattern Recognition Receptor FLS2 Angela Chaparro-Garcia,Simon Schwizer,Jan Sklenar,Kentaro Yoshida,Benjamin Petreet al. PLoS ONE, 2015, 10 (9), pp.e0137071. ⟨10.1371/journal.pone.0137071⟩ Article dans une revue hal-02548509v1
Candidate Effector Proteins of the Rust Pathogen Melampsora larici-populina Target Diverse Plant Cell Compartments Benjamin Petre,Diane G O Saunders,Jan Sklenar,Cécile Lorrain,Joe Winet al. Molecular Plant-Microbe Interactions, 2015, 28 (6), pp.689-700. ⟨10.1094/MPMI-01-15-0003-R⟩ Article dans une revue hal-01269166v1
The Top 10 oomycete pathogens in molecular plant pathology Sophien Kamoun,Oliver Furzer,Jonathan D. G. Jones,Howard S. Judelson,Gul Shad Aliet al. Molecular Plant Pathology, 2015, 16 (4), pp.413-434. ⟨10.1111/mpp.12190⟩ Article dans une revue (article de synthèse) hal-02548510v1
Genome analysis of poplar LRR-RLP gene clusters reveals RISP, a defense-related gene coding a candidate endogenous peptide elicitor Benjamin Petre,Stéphane Hacquard,Sébastien Duplessis,Nicolas Rouhier Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00111⟩ Article dans une revue hal-02548502v1
How do filamentous pathogens deliver effector proteins into plant cells? Benjamin Petre,Sophien Kamoun PLoS Biology, 2014, 12 (2), ⟨10.1371/journal.pbio.1001801⟩ Article dans une revue hal-01268569v1
The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1 Henri Pégeot,Cha San Koh,Benjamin Petre,Sandrine Mathiot,Sébastien Duplessiset al. Frontiers in Plant Science, 2014, 5, article 712 (15 p.). ⟨10.3389/fpls.2014.00712⟩ Article dans une revue hal-01521321v1
Effector proteins of rust fungi Benjamin Petre,David L. Joly,Sébastien Duplessis Frontiers in Plant Science, 2014, 5, pp.938-47. ⟨10.3389/fpls.2014.00416⟩ Article dans une revue hal-01579674v1
Effector wisdom Amy Huei-Yi Lee,Benjamin Petre,David Joly New Phytologist, 2013, 197 (2), pp.375-377. ⟨10.1111/nph.12058⟩ Article dans une revue hal-02548496v1
RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter Benjamin Petre,Emmanuelle Morin,Emilie Tisserant,Stéphane Hacquard,Corinne da Silvaet al. PLoS ONE, 2012, 7 (8), pp.1-12. ⟨10.1371/journal.pone.0044408⟩ Article dans une revue hal-01267887v1
A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust). Stéphane Hacquard,David L. Joly,Yao-Cheng Lin,Emilie Tisserant,Nicolas Feauet al. Molecular Plant-Microbe Interactions, 2012, 25 (3), pp.279-293. ⟨10.1094/MPMI-09-11-0238⟩ Article dans une revue hal-01267890v1
Genome-wide analysis of eukaryote thaumatin-like proteins (TLPs) with an emphasis on poplar Benjamin Petre,Ian Major,Nicolas Rouhier,Sébastien Duplessis BMC Plant Biology, 2011, 11 (1), pp.33. ⟨10.1186/1471-2229-11-33⟩ Article dans une revue hal-02548481v1
The poplar-poplar rust interaction: insights from genomics and transcriptomics Stéphane S. Hacquard,Benjamin Petre,Pascal Frey,Arnaud Hecker,Nicolas Rouhieret al. Journal of Pathogens, 2011, EPUB 2011 Article dans une revue hal-02642064v1

Communication dans un congrès (4)

Towards the identification of novel metal- or thiol-based regulated proteins in plants Tiphaine Dhalleine,Mathieu Schwartz,Flavien Zannini,Linda de Bont,Jérémy Couturieret al. International Symposium of the DFG Priority Program 1710 Dynamics of Thiol-based Redox Switches in Cellular Physiology, Mar 2021, e-conference, Germany Communication dans un congrès hal-03197988v1
Are the ubiquitous mitochondrial glutaredoxin-like proteins of 12 kDa (MGP12) true glutaredoxins? Tiphaine Dhalleine,Mathieu Schwartz,Marc Quinternet,Benjamin Chagot,Benjamin Petreet al. Thiol-based switches and redox regulation – from microbes to men, Sep 2019, San Feliu de Guixols, Spain Communication dans un congrès hal-03197996v1
Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus &lt;em&gt;Melampsora larici-populina&lt;/em&gt; Benjamin Petre,Stéphane S. Hacquard,Antoine Persoons,Emilie Tisserant,Emmanuelle Morinet al. IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States Communication dans un congrès hal-02801804v1
Les apports de la génomique pour l’étude des familles multigéniques : exemple des thaumatin-like proteins (TLPs) chez le peuplier Benjamin Petre,Ian Major,Pascal Frey,Francis Martin,Nicolas Rouhieret al. Séminaire de l’Ecole Doctorale RP2E. Biodiversité, Ingénierie écologique, Jan 2011, Vandoeuvre-lès-Nancy, France. 8 p Communication dans un congrès hal-02746248v1

Poster de conférence (2)

The poplar rust fungus effector biology: challenges of functional characterization of effectors in a non-model system Cécile Lorrain,Benjamin Petre,Diane G. O. Saunders,Jan Sklenar,Win Jet al. 29th Fungal Genetics Conference, Mar 2019, Asilomar, Pacific Grove, Californie, United States Poster de conférence hal-03253573v1
Functional characterization of Melampsora larici-populina candidate effectors Cécile Lorrain,Benjamin Petre,Diane G. O. Saunders,Jan Sklenar,Win Joeet al. 13th European Conference on Fungal Genertics (ECFG13), Apr 2016, Paris, France Poster de conférence hal-03253587v1

Chapitre d'ouvrage (1)

Protein–Protein Interaction Assays with Effector–GFP Fusions in Nicotiana benthamiana Benjamin Petre,Joe Win,Frank Menke,Sophien Kamoun Wheat Rust Diseases, pp.85-98, 2017, ⟨10.1007/978-1-4939-7249-4_8⟩ Chapitre d'ouvrage hal-02548537v1

Pré-publication, Document de travail (5)

A decade after the first Pucciniales genomesa snapshot of (post) genomics studies in three model rust fungi Benjamin Petre,Sébastien Duplessis 2022 Pré-publication, Document de travail hal-03719656v1
2000-2019: twenty years of highly influential publications in plant immunity Benjamin Petre,Clémentine Louet,Julie Lintz,Sébastien Duplessis 2021 Pré-publication, Document de travail hal-03325099v2
A survey of highly influential studies on plant pathogen effectors during the last two decades (2000-2020) Clémentine Louet,Sébastien Duplessis,Pascal Frey,Benjamin Petre 2021 Pré-publication, Document de travail hal-03388325v1
Host-interactor screens of Phytophthora infestans RXLR proteins reveal vesicle trafficking as a major effector-targeted process Benjamin Petre,Mauricio Contreras,Tolga Bozkurt,Martin Schattat,Jan Sklenaret al. 2020 Pré-publication, Document de travail hal-03015488v1
Cell re-entry assays do not support models of pathogen- independent translocation of AvrM and AVR3a effectors into plant cells Benjamin Petre,Michaela Kopischke,Alexandre Evrard,Silke Robatzek,Sophien Kamoun 2016 Pré-publication, Document de travail hal-03010697v1

Rapport (1)

INTERPOPGER Interactions entre peupleraies naturelles et cultivées et pressions évolutives liées à leurs modes de gestion. Bilan scientifique 2005‐2008 Catherine Bastien,Jose-Luis Almeida Falcon,Nicolas Chenault,Arnaud Dowkiw,Vanina Guérinet al. 2008 Rapport hal-02824228v1

Thèse (1)

Contribution à l'analyse post-génomique de l'interaction entre le peuplier et Melampsora larici-populina, le champignon biotrophe responsable de la maladie de la rouille foliaire Benjamin Petre Biologie végétale. Université de Lorraine, 2012. Français. ⟨NNT : 2012LORR0110⟩ Thèse tel-01751088v1