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Bertrand Servin

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Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations

Alice Danguy Des Déserts , Nicolas Durand , Bertrand Servin , Ellen Goudemand-Dugué , Jean-Marc Alliot
Journal articles hal-04186221v1

A meta-analysis of genetic and phenotypic diversity of European local pig breeds reveals genomic regions associated with breed differentiation for production traits

Klavdija Poklukar , Camille Mestre , Martin Škrlep , Marjeta Čandek-Potokar , Cristina Ovilo
Genetics Selection Evolution, 2023, 55 (1), pp.88. ⟨10.1186/s12711-023-00858-3⟩
Journal articles hal-04329951v1
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Genome‐wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig

Nicolas Mary , Nathalie Iannuccelli , Geoffrey Petit , Nathalie Bonnet , Alain Pinton
Evolutionary Applications, 2022, 15 (7), pp.1115-1128. ⟨10.1111/eva.13432⟩
Journal articles hal-03740011v1

Two quantitative trait loci are associated with recapping of Varroa destructor ‐infested brood cells in Apis mellifera mellifera

M. Guichard , B. Dainat , S. Eynard , Alain Vignal , Bertrand Servin
Animal Genetics, 2022, 53 (1), pp.156-160. ⟨10.1111/age.13150⟩
Journal articles hal-03540810v1
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Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: Statistical Methods and their application to honeybee

Sonia E Eynard , Alain Vignal , Benjamin Basso , Kamila Canale‐tabet , Yves Le Conte
Molecular Ecology Resources, 2022, 22 (8), pp.3035-3048. ⟨10.1111/1755-0998.13685⟩
Journal articles hal-03855231v1
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Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones

David Wragg , Sonia Eynard , Benjamin B. Basso , Kamila Canale-Tabet , Emmanuelle Labarthe
Molecular Ecology Resources, 2022, 22 (8), pp.3068-3086. ⟨10.1111/1755-0998.13665⟩
Journal articles hal-03807491v1
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Genomic Uniqueness of Local Sheep Breeds From Morocco

Abdessamad Ouhrouch , Simon Boitard , Frédéric Boyer , Bertrand Servin , Anne da Silva
Frontiers in Genetics, 2021, 12, 13 p. ⟨10.3389/fgene.2021.723599⟩
Journal articles hal-03591256v1
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Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences

Matthieu Guichard , Benjamin Dainat , Sonia Eynard , Alain Vignal , Bertrand Servin
Animal Genetics, 2021, pp.13070. ⟨10.1111/age.13070⟩
Journal articles hal-03252574v1
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Analyse de l'hybridation dans les populations françaises de sangliers à l'aide de données de génotypage pangénomique

Nicolas Mary , Nathalie Iannuccelli , Geoffrey Petit , Nathalie Bonnet , Alain Pinton
Journées de la Recherche Porcine en France, 2021
Journal articles hal-03482640v1
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Local adaptations of Mediterranean sheep and goats through an integrative approach

Bruno Serranito , Marco Cavalazzi , Pablo Vidal , Dominique Taurisson-Mouret , Elena Ciani
Scientific Reports, 2021, 11, pp.21363. ⟨10.1038/s41598-021-00682-z⟩
Journal articles hal-03421679v1
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Gene Banks as Reservoirs to Detect Recent Selection: The Example of the Asturiana de los Valles Bovine Breed

Simon Boitard , Cyriel Paris , Natalia Sevane , Bertrand Servin , Kenza Bazi-Kabbaj
Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.575405⟩
Journal articles hal-03357162v1
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MOSAR -Méthodes et Outils pour la Sélection d'Abeilles Résistantes à Varroa

Benjamin B. Basso , Sonia E. Eynard , Alain Vignal , Maxime Beguin , Anne-Laure Guirao
Innovations Agronomiques, 2021, 82, pp.229-245. ⟨10.15454/zna6-4g12⟩
Journal articles hal-03159732v1
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Evolution of recombination landscapes in diverging populations of bread wheat

Alice Danguy Des Déserts , Sophie Bouchet , Pierre Sourdille , Bertrand Servin
Genome Biology and Evolution, 2021, 13 (8), ⟨10.1093/gbe/evab152⟩
Journal articles hal-03290674v1
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Evaluation of Suppressed Mite Reproduction (SMR) Reveals Potential for Varroa Resistance in European Honey Bees (Apis mellifera L.)

Fanny Mondet , Melanie Parejo , Marina Meixner , Cecilia Costa , Per Kryger
Insects, 2020, 11 (9), pp.595. ⟨10.3390/insects11090595⟩
Journal articles hal-02933234v1
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Descriptive analysis of the varroa non-reproduction trait in honey bee colonies and association with other traits related to varroa resistance

Sonia E. Eynard , Christina Sann , Benjamin Basso , Anne-Laure Guirao , Yves Le Conte
Insects, 2020, 11 (8), pp.1-16. ⟨10.3390/insects11080492⟩
Journal articles hal-02937567v1
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Inference of Selection from Genetic Time Series Using Various Parametric Approximations to the Wright-Fisher Model

Cyriel Paris , Bertrand Servin , Simon Boitard
G3, 2019, 9 (12), pp.4073-4086. ⟨10.1534/g3.119.400778⟩
Journal articles hal-02624801v1
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Genetic diversity analysis of French goat populations reveals selective sweeps involved in their differentiation

Claire Oget , Bertrand Servin , Isabelle Palhiere
Animal Genetics, 2019, 50 (1), pp.54-63. ⟨10.1111/age.12752⟩
Journal articles hal-02624348v1
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Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes

Licia Colli , Marco Milanesi , Andrea Talenti , Francesca Bertolini , Minhui Chen
Genetics Selection Evolution, 2018, 50 (1), pp.58. ⟨10.1186/s12711-018-0422-x⟩
Journal articles hal-02405280v1
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Signatures of selection and environmental adaptation across the goat genome post-domestication

Francesca Bertolini , Bertrand Servin , Andrea Talenti , Estelle Rochat , Eui Soo Kim
Genetics Selection Evolution, 2018, 50 (1), pp.57. ⟨10.1186/s12711-018-0421-y⟩
Journal articles hal-02405277v1

Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals

Aniek C. Bouwman , Hans D. Daetwyler , Amanda J. Chamberlain , Carla Hurtado Ponce , Mehdi Sargolzaei
Nature Genetics, 2018, 50 (3), pp.362-367. ⟨10.1038/s41588-018-0056-5⟩
Journal articles hal-02628780v1
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Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep

Christina Rochus , Flavie Tortereau , Florence Plisson-Petit , Gwendal Restoux , Carole Moreno-Romieux
BMC Genomics, 2018, 19 (1), pp.Non Paginé. ⟨10.1186/s12864-018-4447-x⟩
Journal articles hal-02626935v1
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Convergent genomic signatures of domestication in sheep and goats

Florian Alberto , Frédéric Boyer , Pablo Orozco-Terwengel , Ian Streeter , Bertrand Servin
Nature Communications, 2018, 9 (1), pp.813. ⟨10.1038/s41467-018-03206-y⟩
Journal articles cea-01875703v1
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Development of a SNP panel dedicated to parentage assignment in French sheep populations

Flavie Tortereau , Carole Moreno-Romieux , Gwenola Tosser-Klopp , Bertrand Servin , Jérôme Raoul
BMC Genetics, 2017, 18 (1), Non paginé. ⟨10.1186/s12863-017-0518-2⟩
Journal articles hal-01605129v1

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

Benoît Darrier , Hélène Rimbert , François Balfourier , Lise Pingault , Ambre-Aurore Josselin
Genetics, 2017, 206 (3), pp.1373-1388. ⟨10.1534/genetics.116.196014⟩
Journal articles hal-01608797v1
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Variation in Recombination Rate and Its Genetic Determinism in Sheep Populations

Morgane Petit , Jean-Michel Astruc , Julien Sarry , Laurence Drouilhet , Stéphane Fabre
Genetics, 2017, 207 (2), pp.767-784. ⟨10.1534/genetics.117.300123⟩
Journal articles hal-02624341v1
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Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep

Julie Demars , Margarita Cano , Laurence Drouilhet , Florence Plisson-Petit , Philippe Bardou
Molecular Biology and Evolution, 2017, 34 (7), pp.1722-1729. ⟨10.1093/molbev/msx114⟩
Journal articles hal-01608205v1

Uncovering Adaptation from Sequence Data : Lessons from Genome Resequencing of Four Cattle Breeds

Simon Boitard , Mekki Boussaha , Aurelien Capitan , Dominique Rocha , Bertrand Servin
Genetics, 2016, 203 (1), pp.433-450. ⟨10.1534/genetics.115.181594⟩
Journal articles hal-01533825v1
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Spatio-temporal gene expression profiling during in vivo early ovarian folliculogenesis: integrated transcriptomic study and molecular signature of early follicular growth

Agnès Bonnet , Bertrand Servin , Philippe Mulsant , Béatrice Mandon-Pepin
PLoS ONE, 2015, 5 (November), pp.1-25. ⟨10.1371/journal.pone.0141482⟩
Journal articles hal-02634306v1
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Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

Edin Hamzić , Bart Buitenhuis , Frédéric Hérault , Rachel Hawken , Mitchel S. Abrahamsen
Genetics Selection Evolution, 2015, 47 (1), pp.91. ⟨10.1186/s12711-015-0170-0⟩
Journal articles hal-01341325v1
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Genome Scan for Selection in Structured Layer Chicken Populations Exploiting Linkage Disequilibrium Information

Mahmood Gholami , Christian Reimer , Malena Erbe , Rudolf Preisinger , Annett Weigend
PLoS ONE, 2015, 10 (7), pp.1-15. ⟨10.1371/journal.pone.0130497⟩
Journal articles hal-02631302v1

Large-scale investigation of response to [i]Eimeria Maxima[/i] challenge in broilers

Edin Hamzic , Bertrand Bed'Hom , Herve Juin , R Hawken , M. S. Abrahamsen
Journal of Animal Science, 2015, 93 (4), pp.1830-1840. ⟨10.2527/jas2014-8592⟩
Journal articles hal-01194093v1
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Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.

Pierre-François Roux , Simon Boitard , Anne Blum , Brian Parks , Alexandra Montagner
G3, 2015, 5, pp.517-529. ⟨10.1534/g3.115.016865⟩
Journal articles hal-01194040v1
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An update of the goat genome assembly using dense radiation hybrid maps allows detailed analysis of evolutionary rearrangements in Bovidae

Xiaoyong Du , Bertrand Servin , James E. Womack , Jianhua Cao , Mei Yu
BMC Genomics, 2014, 15, ⟨10.1186/1471-2164-15-625⟩
Journal articles hal-02631615v1
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A genome-wide association study of production traits in a commercial population of Large White pigs: evidence of haplotypes affecting meat quality

Marie-Pierre Sanchez , Thierry Tribout , Nathalie Iannuccelli , Marcel Bouffaud , Bertrand Servin
Genetics Selection Evolution, 2014, 46 (1), pp.1-12. ⟨10.1186/1297-9686-46-12⟩
Journal articles hal-01193779v1
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Selection signatures in worldwide sheep populations

María Inés Fariello , Bertrand Servin , Gwenola Tosser-Klopp , Rachel Rupp , Carole Moreno-Romieux Moreno
PLoS ONE, 2014, 9 (8), pp.1-12. ⟨10.1371/journal.pone.0103813⟩
Journal articles hal-02640427v1
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The sheep genome illuminates biology of the rumen and lipid metabolism

Yu Jiang , Min Xie , Wenbin Chen , Richard Talbot , Jillian F. Maddox
Science, 2014, 344 (6188), pp.1168-1173. ⟨10.1126/science.1252806⟩
Journal articles hal-02635391v1
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Evolutionary origin of Bone Morphogenetic Protein 15 and growth and differentiation factor 9 and differential selective pressure between mono- and polyovulating species

Olivier Monestier , Bertrand Servin , Sylvain Auclair , Thomas Bourquard , Anne Poupon
Biology of Reproduction, 2014, 91 (4), pp.1-13. ⟨10.1095/biolreprod.114.119735⟩
Journal articles hal-01129871v1
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Transcriptome-wide investigation of genomic imprinting in chicken

Laure Fresard , Sophie Leroux , Bertrand Servin , David Gourichon , Patrice Dehais
Nucleic Acids Research, 2014, 42 (6), pp.3768-3782. ⟨10.1093/nar/gkt1390⟩
Journal articles hal-01019569v1
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A genome-wide association study points out the causal implication of SOX9 in the sex-reversal phenotype in XX pigs

Sarah Rousseau Rousseau , Nathalie N. Iannuccelli , Marie-Jose Mercat-Gernigon Mercat , Claire Naylies , Jean-Claude J.-C. Thouly
PLoS ONE, 2013, 8 (11), pp.1-11. ⟨10.1371/journal.pone.0079882⟩
Journal articles hal-01004777v1

Detecting signatures of selection through haplotype differentiation among hierarchically structured populations.

María Inés Fariello , Simon Boitard , Hugo Naya , Magali San Cristobal , Bertrand Servin
Genetics, 2013, 193 (3), pp.929-41. ⟨10.1534/genetics.112.147231⟩
Journal articles hal-00842696v1
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Adaptation of maize to temperate climates: mid-density genome-wide association genetics and diversity patterns reveal key genomic regions, with a major contribution of the Vgt2 (ZCN8) locus

Sophie Bouchet , Bertrand Servin , Pascal Bertin , Delphine D. Madur , Valerie V. Combes
PLoS ONE, 2013, 8 (8), ⟨10.1371/journal.pone.0071377⟩
Journal articles hal-02652500v1

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)

Yang Dong , Min Xie , Yu Jiang , Nianqing Xiao , Xiaoyong Du
Nature Biotechnology, 2013, 31 (2), pp.135-141. ⟨10.1038/nbt.2478⟩
Journal articles hal-02651460v1
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A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content

Flavie Tortereau , Bertrand Servin , Laurent Frantz , Hendrik-Jan Megens , Denis Milan
BMC Genomics, 2012, 13, online (november), Non paginé. ⟨10.1186/1471-2164-13-586⟩
Journal articles hal-02646895v1

Analyses of pig genomes provide insight into porcine demography and evolution

Martien A. M. Groenen , Alan L. Archibald , Hirohide Uenishi , Christopher K. Tuggle , Yasuhiro Takeuchi
Nature, 2012, 491 (7426), pp.393-398. ⟨10.1038/nature11622⟩
Journal articles cea-00880676v1
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Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail

Laure Fresard , Sophie Leroux , Patrice Dehais , Bertrand Servin , Hélène Gilbert
BMC Genomics, 2012, 13, online (october), Non paginé. ⟨10.1186/1471-2164-13-551⟩
Journal articles hal-01129669v1
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Genome-wide analysis of the world’s sheep breeds reveals high levels of historic mixture and strong recent selection

James W. Kijas , Johannes A. Lenstra , Ben Hayes , Simon S. Boitard , Laercio R. Porto Neto
PLoS Biology, 2012, 10, online (2), Non paginé. ⟨10.1371/journal.pbio.1001258⟩
Journal articles hal-02652546v1
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High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly

Bertrand Servin , Thomas Faraut , Nathalie N. Iannuccelli , Diana Zelenika , Denis Milan
BMC Genomics, 2012, 13, online (november), Non paginé. ⟨10.1186/1471-2164-13-585⟩
Journal articles hal-02644217v1
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A locally congenic backcross design in pig: a new regional fine QTL mapping approach miming congenic strains used in mouse

Juliette Riquet , Hélène Gilbert , Bertrand Servin , Marie-Pierre Sanchez , Nathalie N. Iannuccelli
BMC Genetics, 2011, 12, online (january), pp.1-9. ⟨10.1186/1471-2156-12-6⟩
Journal articles hal-01000531v1

Statistical confidence measures for genome maps: application to the validation of genome assemblies

Bertrand Servin , Simon de Givry , Thomas Faraut
Bioinformatics, 2010, 26 (24), pp.3035-3042. ⟨10.1093/bioinformatics/btq598⟩
Journal articles hal-02665786v1

Genetic variability and linkage disequilibrium patterns in the bovine DNAJA1 gene

Amandine Marty , Yves Amigues , Bertrand Servin , Gilles Renand , Hubert H. Levéziel
Molecular Biotechnology, 2010, 44 (3), pp.190-197. ⟨10.1007/s12033-009-9228-y⟩
Journal articles hal-01193442v1

Detecting selection in population trees: the Lewontin and Krakauer test extended.

Maxime Bonhomme , Claude Chevalet , Bertrand Servin , Simon Boitard , Jihad Abdallah
Genetics, 2010, 186 (1), pp.241-62. ⟨10.1534/genetics.104.117275⟩
Journal articles hal-00842515v1

Detecting Selection in Population Trees: The Lewontin and Krakauer Test Extended

Maxime Bonhomme , Claude C. Chevalet , Bertrand Servin , Simon S. Boitard , Jihad Abdallah
Genetics, 2010, 186 (1), pp.241-262. ⟨10.1534/genetics.110.117275⟩
Journal articles hal-02655907v1

Contribution of Radiation Hybrids to Genome Mapping in Domestic Animals.

Thomas Faraut , Simon de Givry , Christophe Hitte , Yvette Lahbib Mansais , Mireille Morisson
Cytogenetic and Genome Research, 2009, 126 (1-2), pp.21-33. ⟨10.1159/000245904⟩
Journal articles inserm-00442389v1

Genome sequence of the -rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia

Claire Amadou , Géraldine Pascal , Sophie Mangenot , Michelle Glew , Cyril Bontemps
Genome Research, 2008, 18 (9), pp.1472 - 1483. ⟨10.1101/gr.076448.108⟩
Journal articles hal-01655676v1
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Imputation-based analysis of association studies: candidate regions and quantitative traits

Bertrand Servin , Matthew Stephens
PLoS Genetics, 2007, 3, pp.1296-1308. ⟨10.1371/journal.pgen.0030114⟩
Journal articles hal-02662573v1

Toward a Theory of Marker-Assisted Gene Pyramiding

Bertrand Servin , Olivier C. Martin , Marc Mézard , Frédéric Hospital
Genetics, 2004, 168, pp.513-523. ⟨10.1534/genetics.103.023358⟩
Journal articles hal-00009229v1

Marker-assisted introgression of 4 Phytophthora capsici resistance QTL alleles into a bell pepper line: validation of additive and epistatic effects

A. Thabuis , Alain Palloix , Bertrand Servin , A.M. Daubèze , Patrick Signoret
Molecular Breeding, 2004, 14, pp.9-20
Journal articles hal-02671845v1

Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds

L. Lecomte , Philippe Duffe , Michel Buret , Bertrand Servin , Frederic F. Hospital
TAG Theoretical and Applied Genetics, 2004, 109, pp.658-668. ⟨10.1007/s00122-004-1674-0⟩
Journal articles hal-02675933v1

Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera

Sonia Eynard , Fanny Mondet , Benjamin Basso , Olivier Bouchez , Tabatha Bulach
2024
Preprints, Working Papers, ... hal-04493727v1
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The black honey bee genome: insights on specific structural elements and a first step towards pan-genomes

Sonia Eynard , Christophe Klopp , Kamila Canale-Tabet , William Marande , Céline Vandecasteele
2024
Preprints, Working Papers, ... hal-04473386v1

Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation

Badr Benjelloun , Kevin Leempoel , Frédéric Boyer , Sylvie Stucki , Ian Streeter
2023
Preprints, Working Papers, ... hal-04186277v1

Discovering genomic regions associated with the phenotypic differentiation of European local pig breeds

Klavdija Poklukar , Camille Mestre , Martin Škrlep , Marjeta Čandek-Potokar , Cristina Ovilo
2023
Preprints, Working Papers, ... hal-04186069v1

Sex-differences in the genetic architecture of individual recombination rates in wild house sparrows ( Passer domesticus )

John Mcauley , Bertrand Servin , Lucy Peters , Ingerid Hagen , Alina Niskanen
2023
Preprints, Working Papers, ... hal-04186240v1

From group to individual - Genotyping by pool sequencing eusocial colonies

Sonia Eynard , Alain Vignal , Benjamin B. Basso , Lucie Genestout , Yves Le Conte
2021
Preprints, Working Papers, ... hal-03482633v1
Image document

Evolution of recombination landscapes in diverging populations of bread wheat

Alice Danguy Des Déserts , Sophie Bouchet , Pierre Sourdille , Bertrand Servin
2021
Preprints, Working Papers, ... hal-03244446v1
Image document

Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones

David Wragg , Sonia E Eynard , Benjamin B. Basso , Kamila Canale-Tabet , Emmanuelle Labarthe
2021
Preprints, Working Papers, ... hal-03482707v1

Variation in recombination rate and its genetic determinism in sheep ( Ovis Aries ) populations from combining multiple genome-wide datasets

Morgane Petit , Jean-Michel Astruc , Julien Sarry , Laurence Drouilhet , Stéphane Fabre
2017
Preprints, Working Papers, ... hal-02936802v1
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Contributions à la modélisation statistique de données génétiques

Bertrand Servin
Génétique. Université de Toulouse, 2020
Habilitation à diriger des recherches tel-02960389v1