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Using Population Based Kalman Estimator to Model COVID-19 Epidemic in France: Estimating the Effects of Non-Pharmaceutical Interventions on the Dynamics of Epidemic
Annabelle Collin
,
Boris P. Hejblum
,
Carole Vignals
,
Laurent Lehot
,
Rodolphe Thiébaut
Journal articles
hal-04151651v1
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CytOpT: Optimal Transport with Domain Adaptation for Interpreting Flow Cytometry data
Paul Freulon
,
Jérémie Bigot
,
Boris Hejblum
Annals of Applied Statistics, In press
Journal articles
hal-03100405v1
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T Cell Immunogenicity, Gene Expression Profile, and Safety of Four Heterologous Prime-Boost Combinations of HIV Vaccine Candidates in Healthy Volunteers: Results of the Randomized Multi-Arm Phase I/II ANRS VRI01 Trial
Laura Richert
,
Jean-Daniel Lelievre
,
Christine Lacabaratz
,
Lucile Hardel
,
Hakim Hocini
Journal articles
hal-03690137v1
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High temporal resolution transcriptomic profiling delineates distinct patterns of interferon response following Covid-19 mRNA vaccination and SARS-CoV2 infection
Darawan Rinchai
,
Sara Deola
,
Gabriele Zoppoli
,
Basirudeen Syed Ahamed Kabeer
,
Sara Taleb
Journal articles
hal-03530948v1
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The benefit of augmenting open data with clinical data-warehouse EHR for forecasting SARS-CoV-2 hospitalizations in Bordeaux area, France
Thomas Ferté
,
Vianney Jouhet
,
Romain Griffier
,
Boris Hejblum
,
Rodolphe Thiébaut
Journal articles
hal-03908260v1
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Doubly-robust evaluation of high-dimensional surrogate markers
Denis Agniel
,
Boris Hejblum
,
Rodolphe Thiébaut
,
Layla Parast
Journal articles
hal-03100499v1
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EpidemiOptim: a Toolbox for the Optimization of Control Policies in Epidemiological Models
Cédric Colas
,
Boris P. Hejblum
,
Sébastien Rouillon
,
Rodolphe Thiébaut
,
Pierre-Yves Oudeyer
Journal articles
hal-03099898v2
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Automatic phenotyping of electronical health record: PheVis algorithm
Thomas Ferté
,
Sébastien Cossin
,
Thierry Schaeverbeke
,
Thomas Barnetche
,
Vianney Jouhet
Journal articles
hal-03100435v1
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Predicting Progression to Advanced Age-Related Macular Degeneration from Clinical, Genetic, and Lifestyle Factors Using Machine Learning
Soufiane Ajana
,
Audrey Cougnard-Grégoire
,
Johanna Colijn
,
Bénédicte M.J. Merle
,
Timo Verzijden
Journal articles
hal-03100320v1
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ATLAS: an automated association test using probabilistically linked health records with application to genetic studies
Harrison Zhang
,
Boris P. Hejblum
,
Griffin Weber
,
Nathan Palmer
,
Susanne Churchill
Journal articles
hal-03478039v1
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Robust and Efficient Optimization Using a Marquardt-Levenberg Algorithm with R Package marqLevAlg
Viviane Philipps
,
Boris P. Hejblum
,
Mélanie Prague
,
Daniel Commenges
,
Cécile Proust-Lima
Journal articles
hal-03100489v1
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CD177, a specific marker of neutrophil activation, is associated with coronavirus disease 2019 severity and death
Yves Lévy
,
Aurélie Wiedemann
,
Boris P. Hejblum
,
Mélany Durand
,
Cécile Lefebvre
Journal articles
hal-03477973v1
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Early signature in the blood lipidome associated with subsequent cognitive decline in the elderly: A case-control analysis nested within the Three-City cohort study
Sophie Lefevre-Arbogast
,
Boris P. Hejblum
,
Catherine Helmer
,
C. Klose
,
Claudine Manach
Journal articles
hal-03155026v1
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Bayesian mixture models for cytometry data analysis
Lin Lin
,
Boris Hejblum
Wiley Interdisciplinary Reviews: Computational Statistics, In press, 13 (4), pp.e1535. ⟨10.1002/wics.1535⟩
Journal articles
hal-03100447v1
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Predicting the retinal content in omega‐3 fatty acids for age‐related macular‐degeneration
Niyazi Acar
,
Bénédicte M. J. Merle
,
Soufiane Ajana
,
Zhiguo He
,
Stéphane Grégoire
Journal articles
hal-03293612v1
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Long-lasting severe immune dysfunction in Ebola virus disease survivors
Aurélie Wiedemann
,
Emile Foucat
,
Hakim Hocini
,
Cécile Lefebvre
,
Boris Hejblum
Journal articles
hal-03160838v2
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Immune Alterations in a Patient with SARS-CoV-2-Related Acute Respiratory Distress Syndrome
Lila Bouadma
,
Aurélie Wiedemann
,
Juliette Patrier
,
Mathieu Surénaud
,
Paul-Henri Wicky
Journal articles
hal-03160737v2
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dearseq: a variance component score test for RNA-Seq differential analysis that effectively controls the false discovery rate
Marine Gauthier
,
Denis Agniel
,
Rodolphe Thiébaut
,
Boris Hejblum
Journal articles
hal-02138664v1
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Semi-supervised estimation of covariance with application to phenome-wide association studies with electronic medical records data
Stephanie F Chan
,
Boris P. Hejblum
,
Abhishek Chakrabortty
,
Tianxi Cai
Journal articles
hal-02425459v1
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Analyzing cellular immunogenicity in vaccine clinical trials: a new statistical method including non-specific responses for accurate estimation of vaccine effect
Édouard Lhomme
,
Boris Hejblum
,
Christine Lacabaratz
,
Aurélie Wiedemann
,
Jean-Daniel Lelièvre
Journal articles
hal-03161945v2
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Probabilistic record linkage of de-identified research datasets with discrepancies using diagnosis codes
Boris P. Hejblum
,
Griffin M. Weber
,
Katherine P. Liao
,
Nathan P Palmer
,
Susanne Churchill
Journal articles
hal-01942279v1
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Sequential Dirichlet Process Mixtures of Multivariate Skew t-distributions for Model-based Clustering of Flow Cytometry Data
Boris P. Hejblum
,
Chariff Alkhassim
,
Raphael Gottardo
,
François Caron
,
Rodolphe Thiébaut
Journal articles
hal-01579063v1
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Benefits of dimension reduction in penalized regression methods for high dimensional grouped data: a case study in low sample size
Soufiane Ajana
,
Niyazi Acar
,
Lionel Brétillon
,
Boris Hejblum
,
Hélène Jacqmin-Gadda
Journal articles
hal-02425449v1
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Sequential Dirichlet process mixture of skew $t$-distributions for model-based clustering of flow cytometry data
Boris P. Hejblum
,
Chariff Alkhassim
,
Raphael Gottardo
,
François Caron
,
Rodolphe Thiébaut
Annals of Applied Statistics, 2019, 13 (1), pp.638-660
Journal articles
hal-03161057v1
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Gene Expression Signatures Associated With Immune and Virological Responses to Therapeutic Vaccination With Dendritic Cells in HIV-Infected Individuals
Rodolphe Thiébaut
,
Boris P. Hejblum
,
Hakim Hocini
,
Henri Bonnabau
,
Jason Skinner
Journal articles
hal-02267014v2
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Diet-Related Metabolites Associated with Cognitive Decline Revealed by Untargeted Metabolomics in a Prospective Cohort
Dorrain Low
,
Sophie Lefèvre-Arbogast
,
Raúl Dominguez-Gonzalez
,
Mireia Urpi Sarda
,
Pierre Micheau
Journal articles
hal-02167524v1
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Association between anti-citrullinated fibrinogen antibodies and coronary artery disease in rheumatoid arthritis
Boris P. Hejblum
,
Jing Cui
,
Lauren J. Lahey
,
Andrew Cagan
,
Jeffrey A. Sparks
Arthritis Care & Research = Arthritis Care and Research, 2018, 70 (7), pp.1113-1117. ⟨10.1002/acr.23444⟩
Journal articles
hal-01654403v1
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Pattern of polyphenol intake and the long-term risk of dementia in older persons
Sophie Lefèvre-Arbogast
,
David Gaudout
,
Julien Bensalem
,
Luc Letenneur
,
Jean-François Dartigues
Journal articles
hal-01887895v1
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PheProb: probabilistic phenotyping using diagnosis codes to improve power for genetic association studies
Jennifer A Sinnott
,
Fiona Cai
,
Sheng Yu
,
Boris P. Hejblum
,
Chuan Hong
Journal articles
hal-01887930v1
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cytometree: A binary tree algorithm for automatic gating in cytometry analysis
Daniel Commenges
,
Chariff Alkhassim
,
Raphael Gottardo
,
Boris P. Hejblum
,
Rodolphe Thiébaut
Journal articles
hal-03161874v2
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Kernel machine score test for pathway analysis in the presence of semi-competing risks
Matey Neykov
,
Boris P. Hejblum
,
Jennifer A Sinnott
Statistical Methods in Medical Research, 2018, Statistical Methods in Medical Research, 27 (4), pp.1099-1114. ⟨10.1177/0962280216653427⟩
Journal articles
hal-01395970v1
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Systems Vaccinology Identifies an Early Innate Immune Signature as a Correlate of Antibody Responses to the Ebola Vaccine rVSV-ZEBOV
Anne Rechtien
,
Laura Richert
,
Hadrien Lorenzo
,
Gloria Martrus
,
Boris P. Hejblum
Journal articles
hal-01579246v1
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Phenome-Wide Association Study of Autoantibodies to Citrullinated and Noncitrullinated Epitopes in Rheumatoid Arthritis
Katherine P. Liao
,
Jeffrey A Sparks
,
Boris P. Hejblum
,
I-Hsin Kuo
,
Jing Cui
Journal articles
hal-01654405v1
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Variance component score test for time-course gene set analysis of longitudinal RNA-seq data
Denis Agniel
,
Boris P. Hejblum
Journal articles
hal-01579077v1
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Group and sparse group partial least square approaches applied in genomics context
Benoit Liquet
,
Pierre Lafaye de Micheaux
,
Boris P. Hejblum
,
Rodolphe Thiébaut
Journal articles
hal-01288891v1
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Time-Course Gene Set Analysis for Longitudinal Gene Expression Data
Boris P. Hejblum
,
Jason Skinner
,
Rodolphe Thiébaut
Journal articles
hal-01203446v1
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L’analyse des « Big Data » en recherche clinique
Rodolphe Thiébaut
,
Boris P. Hejblum
,
Laura Richert
Journal articles
inserm-00933691v1
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Systems analysis of sex differences reveals an immunosuppressive role for testosterone in the response to influenza vaccination.
David Furman
,
Boris P. Hejblum
,
Noah Simon
,
Vladimir Jojic
,
Cornelia L. Dekker
Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (2), pp.869-74. ⟨10.1073/pnas.1321060111⟩
Journal articles
inserm-00933693v1
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Evidence synthesis through a degradation model applied to myocardial infarction.
Daniel Commenges
,
Boris P. Hejblum
Journal articles
inserm-00726036v1
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