Camille Berthelot Group leader, Institut PasteurSenior Researcher, Inserm

Publications

Article dans une revue (14)

Stepwise evolution of placental cell types Eulalie Liorzou,Camille Berthelot Nature Ecology & Evolution, 2025, 9 (8), pp.1315-1316. ⟨10.1038/s41559-025-02768-7⟩ Article dans une revue hal-05304197v1
Solving an enigma in the tree of life, at the origins of teleost fishes Elise Parey,Camille Berthelot,Hugues Roest Crollius,Yann Guiguen Comptes Rendus. Biologies, 2024, 347 (G1), pp.1-8. ⟨10.5802/crbiol.150⟩ Article dans une revue hal-04744018v1
Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom Matthieu Muffato,Alexandra Louis,Nga Thi Thuy Nguyen,Joseph Lucas,Camille Berthelotet al. Nature Ecology & Evolution, 2023, 7, pp.355-366. ⟨10.1038/s41559-022-01956-z⟩ Article dans une revue hal-03943655v1
Phylogenetic modeling of enhancer shifts in African mole-rats reveals regulatory changes associated with tissue-specific traits Elise Parey,Diego Fernandez-Aroca,Stephanie Frost,Ainhoa Uribarren,Thomas J Parket al. Genome Research, 2023, 33 (9), pp.1513-1526. ⟨10.1101/gr.277715.123⟩ Article dans une revue pasteur-04008255v2
Genome structures resolve the early diversification of teleost fishes Elise Parey,Alexandra Louis,Jérôme Montfort,Olivier Bouchez,Céline Roqueset al. Science, 2023, 379 (6632), pp.572-575. ⟨10.1101/2022.04.07.487469⟩ Article dans une revue hal-03765882v1
An atlas of fish genome evolution reveals delayed rediploidization following the teleost whole-genome duplication Elise Parey,Alexandra Louis,Jérôme Montfort,Yann Guiguen,Hugues Roest Crolliuset al. Genome Research, 2022, 32 (9), pp.1685 - 1697. ⟨10.1101/gr.276953.122⟩ Article dans une revue hal-03876769v1
Classification of non-coding variants with high pathogenic impact Lambert Moyon,Camille Berthelot,Alexandra Louis,Nga Thi Thuy Nguyen,Hugues Roest Crollius PLoS Genetics, 2022, 18 (4), pp.e1010191. ⟨10.1371/journal.pgen.1010191⟩ Article dans une revue hal-03698847v1
The bowfin genome illuminates the developmental evolution of ray-finned fishes Andrew W Thompson,M Brent Hawkins,Elise Parey,Dustin J Wcisel,Tatsuya Otaet al. Nature Genetics, 2021, 53, pp.1373 - 1384. ⟨10.1038/s41588-021-00914-y⟩ Article dans une revue hal-03457561v1
Synteny-Guided Resolution of Gene Trees Clarifies the Functional Impact of Whole-Genome Duplications Elise Parey,Alexandra Louis,Cédric Cabau,Yann Guiguen,Hugues Roest Crolliuset al. Molecular Biology and Evolution, 2020, 37 (11), pp.3324 - 3337. ⟨10.1093/molbev/msaa149⟩ Article dans une revue hal-03457579v1
Chromosome evolution at the origin of the ancestral vertebrate genome Christine Sacerdot,Alexandra Louis,Céline Bon,Camille Berthelot,Hugues Roest Crollius Genome Biology, 2018, 19 (1), ⟨10.1186/s13059-018-1559-1⟩ Article dans une revue hal-02415626v1
Evolution of gene expression after whole-genome duplication: New insights from the spotted gar genome Jérémy Pasquier,Ingo Braasch,Peter Batzel,Cédric Cabau,Jérôme Montfortet al. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 2017, 328 (7), pp.709 - 721. ⟨10.1002/jez.b.22770⟩ Article dans une revue hal-01788671v1
The 3D Organization of Chromatin Explains Evolutionary Fragile Genomic Regions Camille Berthelot,Matthieu Muffato,Judith Abecassis,Hugues Roest Crollius Cell Reports, 2015, 10 (11), pp.1913-1924. ⟨10.1016/j.celrep.2015.02.046⟩ Article dans une revue hal-02415838v1
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates. Camille Berthelot,Frédéric Brunet,Domitille Chalopin,Amélie Juanchich,Maria Bernardet al. Nature Communications, 2014, 5, pp.1-10. ⟨10.1038/ncomms4657⟩ Article dans une revue hal-01193812v1
An efficient multistrategy DNA decontamination procedure of PCR reagents for hypersensitive PCR applications. Sophie Champlot,Camille Berthelot,Mélanie Pruvost,E Andrew Bennett,Thierry Grangeet al. PLoS ONE, 2010, 5 (9), pp.e13042. ⟨10.1371/journal.pone.0013042⟩ Article dans une revue hal-00526229v1

Chapitre d'ouvrage (2)

SCORPiOs, a Novel Method to Reconstruct Gene Phylogenies in the Context of a Known WGD Event Elise Parey,Hugues Roest Crollius,Camille Berthelot Yves Van de Peer. Polyploidy. Methods and Protocols, 2545, Springer US, pp.155-173, 2023, Methods in Molecular Biology, ⟨10.1007/978-1-0716-2561-3_8⟩ Chapitre d'ouvrage hal-04345139v1
The rainbow trout genome, an important landmark for aquaculture and genome evolution Julien Bobe,Lucie Marandel,Stéphane Panserat,Pierre Boudinot,Camille Berthelotet al. Genomics in Aquaculture, Academic Press, 2016, 978-0-12-801418-9. ⟨10.1016/B978-0-12-801418-9.00002-0⟩ Chapitre d'ouvrage hal-01595642v1

Pré-publication, Document de travail (6)

Alignment-free integration of single-nucleus ATAC-seq across species with sPYce Leo Zeitler,Camille Berthelot 2025 Pré-publication, Document de travail hal-05304205v1
Clustering data by reordering them Axel Descamps,Sélène Forget,Aliénor Lahlou,Claire Lavergne,Camille Berthelotet al. 2025 Pré-publication, Document de travail hal-05394864v1
Convergent gene expression in epithelial cells illuminates the evolution of uterine receptivity Axelle Brulport,Małgorzata Anna Gazda,Maëlle Daunesse,Eulalie Liorzou,Bruno Raquilletet al. 2024 Pré-publication, Document de travail pasteur-04779485v1
Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom Matthieu Muffato,Alexandra Louis,Nga Thi Thuy Nguyen,Joseph Lucas,Camille Berthelotet al. 2022 Pré-publication, Document de travail hal-03765869v1
Synteny-guided resolution of gene trees clarifies the functional impact of whole genome duplications Elise Parey,Alexandra Louis,Cédric Cabau,Yann Guiguen,Hugues Roest-Crolliuset al. 2020 Pré-publication, Document de travail (preprint/prepublication) hal-02791038v1
Evolution of gene expression after whole-genome duplication: new insights from the spotted gar genome Jérémy Pasquier,Ingo Braasch,Peter Batzel,Cédric Cabau,Jérôme Montfortet al. 2017 Pré-publication, Document de travail (preprint/prepublication) hal-02791027v1

Thèse (1)

Etude des mécanismes évolutifs perturbant l’organisation des gènes dans les génomes de vertébrés Camille Berthelot Sciences agricoles. Université Paris Sud - Paris XI, 2012. Français. ⟨NNT : 2012PA112192⟩ Thèse tel-00750114v1

HDR (1)

Comparative genomics and the emergence of evolutionary innovations in Vertebrates Camille Berthelot Genetics. Université Paris Saclay, 2022 HDR tel-04090108v1

Communication dans un congrès (1)

GENOTROUT - Apport des nouvelles technologies de séquençage (NGS) à l'analyse du génome de la truite arc-en-ciel (2010-2013) Yann Guiguen,Carine Genet,Edwige Quillet,Mekki Boussaha,Jean-Nicolas Volffet al. 9. Colloque Agenae/ANR, Mar 2012, La Rochelle, France. pp.18 Communication dans un congrès hal-01019800v1

Poster de conférence (1)

Insights into vertebrate whole-genome duplications from the rainbow trout genome Camille Berthelot,Frédéric Brunet,Domitille Chalopin,Amélie Juanchich,Maria Bernardet al. 22. Annual Meeting of the Society for Molecular Biology and Evolution (SMBE), Jun 2014, Puerto Rico, Puerto Rico. 2014, Smbe 2014. Molecular Evolution: From Genome Technology to the History of Life Poster de conférence hal-01194063v1

Autre publication scientifique (1)

How the pelvis evolved to enable human bipedalism Camille Berthelot 2025, pp.858-859. ⟨10.1038/d41586-025-02424-x⟩ Autre publication scientifique pasteur-05303255v1