Celine Scornavacca
99
Documents
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Treewidth-Based Algorithms for the Small Parsimony Problem on Networks21st International Workshop on Algorithms in Bioinformatics (WABI), Aug 2021, Chicago. Due to COVID-19, WABI 2021 will be held online., United States. pp.6:1, ⟨10.4230/LIPIcs.WABI.2021.6⟩
Conference papers
hal-03287112v1
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Scanning Phylogenetic Networks is NP-hardSOFSEM 2020 - 46th International Conference on Current Trends in Theory and Practice of Informatics, Jan 2020, Limassol, Cyprus. pp.519-530, ⟨10.1007/978-3-030-38919-2_42⟩
Conference papers
hal-02353161v2
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Reconciling Multiple Genes Trees via Segmental Duplications and LossesWABI, 2018, Helsinki, Finland. pp.5:1--5:16
Conference papers
hal-02155103v1
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On the Weighted Quartet Consensus problemCPM, 2018, Warsaw, Poland. pp.28:1-28:18, ⟨10.4230/LIPIcs.CPM.2017.28⟩
Conference papers
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Constructing a Consensus Phylogeny from a Leaf-Removal DistanceSPIRE 2017, Sep 2017, Palermo, Italy. pp.129--143, ⟨10.1007/978-3-319-67428-5\_12⟩
Conference papers
hal-02155266v1
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Phylogenomics unravels the complex reticulated history and shifts in mating systems in wheat relatives (Aegilops/Triticum genus)ALPHY 2016: Belgium-French meeting on Bioinformatics and Evolutionary Genomics March 17-18 2016, Institut de Biologie Physico-Chimique (IBPC). Paris, FRA. Muséum National d’Histoire Naturelle (MNHN), FRA., Mar 2016, Lille, France
Conference papers
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Efficient FPT Algorithms for (Strict) Compatibility of Unrooted Phylogenetic TreesAAIM: Algorithmic Aspects in Information and Management, Jul 2016, Bergamo, Italy. pp.53-64, ⟨10.1007/978-3-319-41168-2_5⟩
Conference papers
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Fast and accurate branch lengths estimation for phylogenomic treesEvolution, Jun 2015, Guarujà, Brazil
Conference papers
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Fast and accurate branch length estimation for phylogenomic trees: ERaBLE (Evolutionary Rates and Branch Length Estimation)Rencontres ALPHY - Génomique Evolutive, Bioinformatique, Alignement et Phylogénie, Mar 2015, Montpellier, France
Conference papers
lirmm-01237447v1
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Reconstructible phylogenetic networks: do not distinguish the indistinguishableEvolution, Jun 2015, Guarujà, Brazil
Conference papers
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Identifiability of phylogenetic networksMCEB: Mathematical and Computational Evolutionary Biology, Jun 2014, Hameau de l'Etoile, St Martin de Londres, France
Conference papers
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Reconstructible phylogenetic networks: no need to distinguish the indistinguishableWaiheke, Feb 2014, Waiheke, New Zealand
Conference papers
lirmm-01237408v1
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A practical approximation algorithm for solving massive instances of hybridization number for binary and nonbinary treesWABI, 2012, Ljubljana, Slovenia. pp.430-440
Conference papers
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Un algorithme de parcimonie efficace pour la réconciliation d'arbres de gènes/espèces avec pertes, duplications et transfertsJournées Ouvertes en Biologie, Informatique et Mathématiques, Institut National d'Etudes Supérieures Agronomiques de Montpellier (Montpellier SupAgro). Montpellier, FRA., Sep 2010, Montpellier, France. pp.8
Conference papers
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From Gene Trees to Species Trees Through a Supertree ApproachLanguage and Automata Theory and Applications : LATA 2009, Apr 2009, Tarragona, Spain. pp.10-19, ⟨10.1007/978-3-642-00982-2_60⟩
Conference papers
lirmm-00367086v1
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The solution space of sorting by reversals3rd International Symposium on Bioinformatics Research and Applications (ISBRA 2007), May 2007, Atlanta, GA, United States. pp.293-304, ⟨10.1007/978-3-540-72031-7_27⟩
Conference papers
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On the inference of complex phylogenetic networks by Markov Chain Monte-CarloJOBIM 2020 - 20e Journées Ouvertes de Biologie, Informatique et Mathématique, Jun 2020, Montpellier, France.
Conference poster
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Phylogenetics in the Genomic EraScornavacca, Celine; Delsuc, Frédéric; Galtier, Nicolas. No commercial publisher | Authors open access book, p.p. 1-568, 2020, 978-2-9575069-0-3
Books
hal-02535070v3
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Phylogenetic NetworksCambridge University Press, 2010
Books
hal-02155099v1
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Reconciling Gene trees with Species TreesScornavacca, Celine; Delsuc, Frédéric; Galtier, Nicolas. Phylogenetics in the Genomic Era, No commercial publisher | Authors open access book, pp.3.2:1--3.2:23, 2020
Book sections
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An Efficient Algorithm for Gene/Species Trees Parsimonious Reconciliation with Losses, Duplications and TransfersEric Tannier. Comparative Genomics. RECOMB-CG 2010, LNCS (6398), Springer Berlin Heidelberg, pp.93-108, 2010, 978-3-642-16181-0. ⟨10.1007/978-3-642-16181-0_9⟩
Book sections
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Comparing reconciled gene trees in linear time2020, pp.100002. ⟨10.24072/pci.mcb.100002⟩
Other publications
hal-03087729v1
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A bird’s white-eye view on neosex chromosome evolution2019, ⟨10.1101/505610⟩
Other publications
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MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers2017, ⟨10.1101/127548⟩
Other publications
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Cutting an alignment with Ockham's razor2019
Preprints, Working Papers, ...
lirmm-02413025v1
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SARS-CoV-2 Through the Lens of Computational Biology: How bioinformatics is playing a key role in the study of the virus and its origins[Research Report] CNRS. 2021, pp.1-35
Reports
hal-03170023v1
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Supertree methods for phylogenomicsBioinformatics [q-bio.QM]. Université Montpellier II - Sciences et Techniques du Languedoc, 2009. English. ⟨NNT : ⟩
Theses
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