Charles Bachy

Publications

Article dans une revue (35)

Symbionts of predatory protists are widespread in the oceans and related to animal pathogens Fabian Wittmers,Camille Poirier,Charles Bachy,Charlotte Eckmann,Olga Matantsevaet al. Cell Host & Microbe, 2025, 33 (2), pp.182-199.e7. ⟨10.1016/j.chom.2025.01.009⟩ Article dans une revue hal-04968405v1
Eukaryotic algal community composition in tropical environments from solar salterns to the open sea Charlotte Eckmann,Jessica Eberle,Fabian Wittmers,Susanne Wilken,Kristin Bergaueret al. Frontiers in Marine Science, 2023, 10, ⟨10.3389/fmars.2023.1131351⟩ Article dans une revue hal-04273229v1
The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound diversity along salinity‐driven gradients Jan Strauss,Chang Jae Choi,Jonathan Grone,Fabian Wittmers,Valeria Jimenezet al. Environmental Microbiology, 2023, ⟨10.1111/1462-2920.16431⟩ Article dans une revue hal-04273232v1
Plastid-localized xanthorhodopsin increases diatom biomass and ecosystem productivity in iron-limited surface oceans Jan Strauss,Longji Deng,Shiqiang Gao,Andrew Toseland,Charles Bachyet al. Nature Microbiology, 2023, 8 (11), pp.2050-2066. ⟨10.1038/s41564-023-01498-5⟩ Article dans une revue hal-04273226v1
Diversité et importance écologique des virus dans le milieu marin Charles Bachy,Anne-Claire Baudoux Médecine/Sciences, 2022, 38 (12), pp.1008-1015. ⟨10.1051/medsci/2022165⟩ Article dans une revue hal-03897509v1
The Land–Sea Connection: Insights Into the Plant Lineage from a Green Algal Perspective Charles Bachy,Fabian Wittmers,Jan Muschiol,Maria Hamilton,Bernard Henrissatet al. Annual Review of Plant Biology, 2022, 73 (1), ⟨10.1146/annurev-arplant-071921-100530⟩ Article dans une revue hal-03627117v1
Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export Charles Bachy,Lisa Sudek,Chang Choi,Charlotte Eckmann,Eva-Maria Nöthiget al. Microorganisms, 2022, 10 (5), pp.961. ⟨10.3390/microorganisms10050961⟩ Article dans une revue hal-04052275v1
The microbiome of a bacterivorous marine choanoflagellate contains a resource-demanding obligate bacterial associate David Needham,Camille Poirier,Charles Bachy,Emma George,Susanne Wilkenet al. Nature Microbiology, 2022, 7 (9), pp.1466-1479. ⟨10.1038/s41564-022-01174-0⟩ Article dans une revue hal-04052236v1
Genomic adaptation of the picoeukaryote $Pelagomonas\ calceolata$ to iron-poor oceans revealed by a chromosome-scale genome sequence Nina Guérin,Marta Ciccarella,Elisa Flamant,Paul Frémont,Sophie Mangenotet al. Communications Biology, 2022, 5 (1), pp.983. ⟨10.1038/s42003-022-03939-z⟩ Article dans une revue cea-03791710v1
Diversité et importance écologique des virus dans le milieu marin Charles Bachy,Anne-Claire Baudoux Médecine/Sciences, 2022, 38 (12), pp.1008-1015. ⟨10.1051/medsci/2022165⟩ Article dans une revue hal-04273234v1
Spatiotemporal Variations in Antarctic Protistan Communities Highlight Phytoplankton Diversity and Seasonal Dominance by a Novel Cryptophyte Lineage Maria Hamilton,Martina Mascioni,Elisabeth Hehenberger,Charles Bachy,Charmaine Yunget al. mBio, 2021, 12 (6), ⟨10.1128/mBio.02973-21⟩ Article dans une revue hal-04052316v1
Viruses infecting a warm water picoeukaryote shed light on spatial co-occurrence dynamics of marine viruses and their hosts Charles Bachy,Charmaine Yung,David Needham,Maria Consuelo Gazitúa,Simon Rouxet al. The International Society of Microbiologial Ecology Journal, 2021, 15 (11), pp.3129-3147. ⟨10.1038/s41396-021-00989-9⟩ Article dans une revue hal-04273247v1
Seasonal and Geographical Transitions in Eukaryotic Phytoplankton Community Structure in the Atlantic and Pacific Oceans Chang Jae Choi,Valeria Jimenez,David Needham,Camille Poirier,Charles Bachyet al. Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.542372⟩ Article dans une revue hal-04273252v1
Closely related viruses of the marine picoeukaryotic alga Ostreococcus lucimarinus exhibit different ecological strategies Amy Zimmerman,Charles Bachy,Xiufeng Ma,Simon Roux,Ho Bin Janget al. Environmental Microbiology, 2019, 21 (6), pp.2148-2170. ⟨10.1111/1462-2920.14608⟩ Article dans une revue hal-04273258v1
A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators David Needham,Susumu Yoshizawa,Toshiaki Hosaka,Camille Poirier,Chang Jae Choiet al. Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (41), pp.20574-20583. ⟨10.1073/pnas.1907517116⟩ Article dans une revue hal-04273260v1
Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth Yuichiro Kashiyama,Akiko Yokoyama,Takashi Shiratori,Sebastian Hess,Fabrice Notet al. The International Society of Microbiologial Ecology Journal, 2019, 13 (8), pp.1899-1910. ⟨10.1038/s41396-019-0377-0⟩ Article dans une revue hal-04273265v1
Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth Yuichiro Kashiyama,Akiko Yokoyama,Takashi Shiratori,Sebastian Hess,Fabrice Notet al. The International Society of Microbiologial Ecology Journal, 2019, 13 (8), pp.1899-1910. ⟨10.1038/s41396-019-0377-0⟩ Article dans une revue hal-03971739v1
Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation Jian Guo,Susanne Wilken,Valeria Jimenez,Chang Jae Choi,Charles Ansonget al. Nature Microbiology, 2018, 3 (7), pp.781-790. ⟨10.1038/s41564-018-0178-7⟩ Article dans une revue hal-04273285v1
Transcriptional responses of the marine green alga Micromonas pusilla and an infecting prasinovirus under different phosphate conditions Charles Bachy,Christina Charlesworth,Amy Chan,Jan Finke,Chee‐hong Wonget al. Environmental Microbiology, 2018, 20 (8), pp.2898-2912. ⟨10.1111/1462-2920.14273⟩ Article dans une revue hal-04273289v1
Symbiont Chloroplasts Remain Active During Bleaching-Like Response Induced by Thermal Stress in Collozoum pelagicum (Collodaria, Retaria) Emilie Villar,Vincent Dani,Estelle Bigeard,Tatiana Linhart,Miguel Mendez-Sandinet al. Frontiers in Marine Science, 2018, 5, pp.387. ⟨10.3389/fmars.2018.00387⟩ Article dans une revue hal-02046464v1
Probing the evolution, ecology and physiology of marine protists using transcriptomics David Caron,Harriet Alexander,Andrew Allen,John Archibald,E. Virginia Armbrustet al. Nature Reviews Microbiology, 2017, 15 (1), pp.6-20. ⟨10.1038/nrmicro.2016.160⟩ Article dans une revue hal-04273294v1
Newly discovered deep-branching marine plastid lineages are numerically rare but globally distributed Chang Jae Choi,Charles Bachy,Gualtiero Spiro Jaeger,Camille Poirier,Lisa Sudeket al. Current Biology, 2017, 27 (1), pp.R15-R16. ⟨10.1016/j.cub.2016.11.032⟩ Article dans une revue hal-04273291v1
Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants Marijke van Baren,Charles Bachy,Emily Nahas Reistetter,Samuel Purvine,Jane Grimwoodet al. BMC Genomics, 2016, 17 (1), pp.267. ⟨10.1186/s12864-016-2585-6⟩ Article dans une revue hal-04273297v1
Updating Biodiversity Studies in Loricate Protists: The Case of the Tintinnids (Alveolata, Ciliophora, Spirotrichea) Luciana Santoferrara,Charles Bachy,Viviana Alder,Jun Gong,Young‐ok Kimet al. Journal of Eukaryotic Microbiology, 2016, 63 (5), pp.651-656. ⟨10.1111/jeu.12303⟩ Article dans une revue istex hal-04273303v1
Intron Invasions Trace Algal Speciation and Reveal Nearly Identical Arctic and Antarctic Micromonas Populations Melinda Simmons,Charles Bachy,Sebastian Sudek,Marijke van Baren,Lisa Sudeket al. Molecular Biology and Evolution, 2015, 32 (9), pp.2219-2235. ⟨10.1093/molbev/msv122⟩ Article dans une revue hal-04273298v1
Ciliates - Protists with complex morphologies and ambiguous early fossil record Micah Dunthorn,Jere H. Lipps,John R. Dolan,Marie Abboud-Abi Saab,Erna Aeschtet al. Marine Micropaleontology, 2015, 119, pp.1-6. ⟨10.1016/j.marmicro.2015.05.004⟩ Article dans une revue hal-03502728v1
Eukaryotic algal phytochromes span the visible spectrum Nathan Rockwell,Deqiang Duanmu,Shelley Martin,Charles Bachy,Dana Priceet al. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (10), pp.3871-3876. ⟨10.1073/pnas.1401871111⟩ Article dans une revue hal-04273305v1
Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea Charles Bachy,David Moreira,John R. Dolan,Purificación López-García FEMS Microbiology Ecology, 2014, 87 (2), pp.330-342. ⟨10.1111/1574-6941.12224⟩ Article dans une revue hal-03502774v1
Marine algae and land plants share conserved phytochrome signaling systems Deqiang Duanmu,Charles Bachy,Sebastian Sudek,Chee-Hong Wong,Valeria Jiménezet al. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (44), pp.15827-15832. ⟨10.1073/pnas.1416751111⟩ Article dans une revue hal-04273327v1
Microbial Ecology: Finding Structure in the Rare Biosphere Charles Bachy,Alexandra Z. Worden Current Biology, 2014, 24 (8), pp.R315-R317. ⟨10.1016/j.cub.2014.03.029⟩ Article dans une revue hal-04273333v1
Cyttarocylis ampulla, a Polymorphic Tintinnid Ciliate of the Marine Plankton John R. Dolan,Richard W. Pierce,Charles Bachy Protist, 2014, 165 (1), pp.66-80. ⟨10.1016/j.protis.2013.11.002⟩ Article dans une revue hal-03502780v1
Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study Charles Bachy,John R. Dolan,Purificación López-García,Philippe Deschamps,David Moreira The International Society of Microbiologial Ecology Journal, 2013, 7 (2), pp.244-255. ⟨10.1038/ismej.2012.106⟩ Article dans une revue hal-03502641v1
Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora) Charles Bachy,Fernando Gomez,Purificación López-García,John R. Dolan,David Moreira Protist, 2012, 163 (6), pp.873-887. ⟨10.1016/j.protis.2012.01.001⟩ Article dans une revue istex hal-03502657v1
Diversity and Vertical Distribution of Microbial Eukaryotes in the Snow, Sea Ice and Seawater Near the North Pole at the End of the Polar Night Charles Bachy,Purificación López-García,Alexander Vereshchaka,David Moreira Frontiers in Microbiology, 2011, 2, ⟨10.3389/fmicb.2011.00106⟩ Article dans une revue hal-04273352v1
Cryptic Sex in the Smallest Eukaryotic Marine Green Alga N. Grimsley,B. Pequin,Charles Bachy,H. Moreau,G. Piganeau Molecular Biology and Evolution, 2009, 27 (1), pp.47-54. ⟨10.1093/molbev/msp203⟩ Article dans une revue hal-04273357v1

Poster de conférence (1)

Genomic adaptation of Pelagomonas calceolata to temperate iron-poor oceans revealed by a chromosome-scale assembled genome Nina Guérin,Quentin Carradec,Marta Ciccarella,Elisa Flamant,Sophie Mangenotet al. Environmental and Agronomical Genomics 2021 symposium, Oct 2021, Tours, France Poster de conférence hal-04410501v1

Chapitre d'ouvrage (1)

Marine Protists: A Hitchhiker’s Guide to their Role in the Marine Microbiome Charles Bachy,Elisabeth Hehenberger,Yu-Chen Ling,David Needham,Jan Strausset al. The Marine Microbiome, 3, Springer International Publishing, pp.159-241, 2022, The Microbiomes of Humans, Animals, Plants, and the Environment, ⟨10.1007/978-3-030-90383-1_4⟩ Chapitre d'ouvrage hal-04052268v1

Pré-publication, Document de travail (1)

Chloroplasts of symbiotic microalgae remain active during bleaching induced by thermal stress in Collodaria (Radiolaria) Emilie Villar,Vincent Dani,Estelle Bigeard,Tatiana Linhart,Miguel Mendez Sandinet al. 2023 Pré-publication, Document de travail hal-03971941v1

Thèse (1)

Phylogénie, diversité et dynamique temporelle chez les ciliés tintinnidés marins Charles Bachy Sciences agricoles. Université Paris Sud - Paris XI, 2012. Français. ⟨NNT : 2012PA112105⟩ Thèse tel-00769949v1