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Chris Bowler

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The possible fates of Fragilariopsis cylindrus (polar diatom) cells exposed to prolonged darkness

Théo Sciandra , Marie‐hélène Forget , Flavienne Bruyant , Marine Béguin , Thomas Lacour et al.
Journal of Phycology, 2022, 58 (2), pp.281-296. ⟨10.1111/jpy.13232⟩
Journal articles hal-03872944v1
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Priorities for ocean microbiome research

Andre Abreu , Etienne Bourgois , Adam Gristwood , Romain Troublé , Silvia Acinas et al.
Nature Microbiology, 2022, 7 (7), pp.937-947. ⟨10.1038/s41564-022-01145-5⟩
Journal articles hal-03781942v1
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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

Daniel Richter , Romain Watteaux , Thomas Vannier , Jade Leconte , Paul Frémont et al.
eLife, 2022, 11, pp.e78129. ⟨10.7554/eLife.78129⟩
Journal articles hal-02399723v2

Whole-genome scanning reveals environmental selection mechanisms that shape diversity in populations of the epipelagic diatom Chaetoceros.

Charlotte Nef , Mohammed-Amin Madoui , Éric Pelletier , Chris Bowler
Plos Biology, 2022, 20 (11), pp.e3001893. ⟨10.1371/journal.pbio.3001893⟩
Journal articles hal-03912026v1
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Diversity and ecological footprint of Global Ocean RNA viruses

Guillermo Dominguez-Huerta , Ahmed Zayed , James Wainaina , Jiarong Guo , Funing Tian et al.
Science, 2022, 376 (6598), pp.1202-1208. ⟨10.1126/science.abn6358⟩
Journal articles hal-03781935v1
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A robust approach to estimate relative phytoplankton cell abundances from metagenomes

Juan José Pierella Karlusich , Eric Pelletier , Lucie Zinger , Fabien Lombard , Adriana Zingone et al.
Molecular Ecology Resources, 2022, ⟨10.1111/1755-0998.13592⟩
Journal articles hal-03559541v1

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

Tom Delmont , Morgan Gaia , Damien Hinsinger , Paul Frémont , Chiara Vanni et al.
Cell Genomics, 2022, 2 (5), pp.100123. ⟨10.1016/j.xgen.2022.100123⟩
Journal articles hal-03872935v2
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Contribution of genome‐scale metabolic modelling to niche theory

Antoine Régimbeau , Marko Budinich , Abdelhalim Larhlimi , Juan José Pierella Karlusich , Olivier Aumont et al.
Ecology Letters, 2022, 25 (6), pp.1352-1364. ⟨10.1111/ele.13954⟩
Journal articles hal-03635158v1
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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae

Richard Dorrell , Alan Kuo , Zoltan Füssy , Elisabeth Richardson , Asaf Salamov et al.
Life Science Alliance, 2022, 6 (3), pp.e202201833. ⟨10.26508/lsa.202201833⟩
Journal articles hal-03859139v1

Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms

Petra Bulankova , Mirna Sekulić , Denis Jallet , Charlotte Nef , Cock van Oosterhout et al.
Current Biology - CB, 2021, 31 (15), pp.3221-+. ⟨10.1016/j.cub.2021.05.013⟩
Journal articles hal-03333507v1
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Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics

Linda Armbrecht , Raphael Eisenhofer , José Utge , Elizabeth Sibert , Fabio Rocha et al.
ISME Communications, 2021, 1 (1), pp.66. ⟨10.1038/s43705-021-00070-8⟩
Journal articles hal-03875226v1
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Evolutionary analysis of DNA methyltransferases in microeukaryotes: Insights from the model diatom Phaeodactylum tricornutum

Antoine Hoguin , Ouardia Ait , Chris Bowler , Auguste Genovesio , Fabio Rocha Jimenez Vieira et al.
BioRxiv, inPress
Journal articles hal-03388012v1

Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean

Tom Delmont , Juan José Pierella Karlusich , Iva Veseli , Jessika Fuessel , A. Murat Eren et al.
ISME Journal, inPress, ⟨10.1101/2021.03.24.436778⟩
Journal articles hal-03480646v1
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

Silvia Acinas , Pablo Sánchez , Guillem Salazar , Francisco Cornejo-Castillo , Marta Sebastián et al.
Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02112-2⟩
Journal articles hal-03238997v1
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Genome-wide analysis of allele-specific expression of genes in the model diatom Phaeodactylum tricornutum

Antoine Hoguin , Achal Rastogi , Chris Bowler , Leila Tirichine
Scientific Reports, 2021, 11, ⟨10.1038/s41598-021-82529-1⟩
Journal articles hal-03384414v1

Genome-wide analysis of allele-specific expression of genes in the model diatom Phaeodactylum tricornutum

Antoine Hoguin , Achal Rastogi , Chris Bowler , Leila Tirichine
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-82529-1⟩
Journal articles hal-03374152v1

Global drivers of eukaryotic plankton biogeography in the sunlit ocean

Guilhem Sommeria-Klein , Romain Watteaux , Federico Ibarbalz , Juan José Pierella Karlusich , Daniele Iudicone et al.
Science, 2021, 374 (6567), pp.594-599. ⟨10.1126/science.abb3717⟩
Journal articles hal-03453705v1
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Environmental vulnerability of the global ocean epipelagic plankton community interactome

Samuel Chaffron , Erwan Delage , Marko Budinich , Damien Vintache , Nicolas Henry et al.
Science Advances , 2021, 7 (35), pp.eabg1921. ⟨10.1126/sciadv.abg1921⟩
Journal articles hal-03443359v2

Author Correction: Macroscale patterns of oceanic zooplankton composition and size structure

Manoela Brandão , Fabio Benedetti , Séverine Martini , Yawouvi Dodji Soviadan , Jean-Olivier Irisson et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-99772-1⟩
Journal articles hal-03458160v1
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Macroscale patterns of oceanic zooplankton composition and size structure

Manoela Brandão , Fabio Benedetti , Séverine Martini , Yawouvi Dodji Soviadan , Jean-Olivier Irisson et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-94615-5⟩
Journal articles hal-03318806v1
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Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes

Richard G Dorrell , Adrien Villain , Benoît Perez-Lamarque , Guillemette Audren de Kerdrel , Giselle Mccallum et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (4), ⟨10.1073/pnas.2009974118/-/DCSupplemental⟩
Journal articles mnhn-03969507v1
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Evolutionary analysis of DNA methyltransferases in microeukaryotes: Insights from the model diatom Phaeodactylum tricornutum

Leila Tirichine , Antoine Hoguin , Ouardia Ait Mohamed , Chris Bowler , Auguste Genovesio et al.
bioRxiv : n'est pas une revue mais un serveur de preprint, In press, ⟨10.1101/2021.06.11.447926⟩
Journal articles hal-03384427v1

Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum

Xue Zhao , Achal Rastogi , Anne Flore Deton Cabanillas , Ouardia Ait Mohamed , Catherine Cantrel et al.
New Phytologist, 2021, 229 (6), pp.3208-3220. ⟨10.1111/nph.17129⟩
Journal articles hal-03153441v1
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A Roadmap for using the UN decade of ocean science for sustainable development in support of science, policy, and action

Joachim Claudet , Laurent Bopp , William W.L. Cheung , Rodolphe Devillers , Elva Escobar-Briones et al.
One Earth, 2020, 2 (1), pp.34-42. ⟨10.1016/j.oneear.2019.10.012⟩
Journal articles hal-02365617v1
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PhaeoNet: A Holistic RNAseq-Based Portrait of Transcriptional Coordination in the Model Diatom Phaeodactylum tricornutum

Ouardia Ait-Mohamed , Anna M G Novák Vanclová , Nathalie Joli , Yue Liang , Xue Zhao et al.
Frontiers in Plant Science, 2020, 11, ⟨10.3389/fpls.2020.590949⟩
Journal articles hal-02997835v1
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Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal

Shinya Sato , Deepak Nanjappa , Richard G Dorrell , Fabio Rocha Jimenez Vieira , Elena Kazamia et al.
Scientific Reports, 2020, 10 (1), pp.9449. ⟨10.1038/s41598-020-65941-x⟩
Journal articles inserm-02886223v1
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Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum

Xue Zhao , Achal Rastogi , Anne Flore Deton Cabanillas , Ouardia Ait Mohamed , Catherine Cantrel et al.
New Phytologist, 2020, 229, pp.3208 - 3220. ⟨10.1111/nph.17129⟩
Journal articles hal-03384417v1
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Probing the Diversity of Polycomb and Trithorax Proteins in Cultured and Environmentally Sampled Microalgae

Xue Zhao , Anne Flore Deton Cabanillas , Alaguraj Veluchamy , Chris Bowler , Fabio Rocha Jimenez Vieira et al.
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00189⟩
Journal articles hal-02997845v1
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Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean

Greta Busseni , Luigi Caputi , Roberta Piredda , Paul Fremont , Bruno Hay Mele et al.
Global Ecology and Biogeography, 2020, 29 (11), pp.1915-1928. ⟨10.1111/geb.13161⟩
Journal articles hal-02992584v1
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Phaeodactylum tricornutum

Chris Bowler , Angela Falciatore
Trends in Genetics, 2019, 35 (9), pp.706-707. ⟨10.1016/j.tig.2019.05.007⟩
Journal articles hal-02380836v1

A genomics approach reveals the global genetic polymorphism, structure, and functional diversity of ten accessions of the marine model diatom Phaeodactylum tricornutum

Achal Rastogi , Fabio Rocha Jimenez Vieira , Anne-Flore Deton-Cabanillas , Alaguraj Veluchamy , Catherine Cantrel et al.
ISME Journal, 2019, 14 (2), pp.347-363. ⟨10.1038/s41396-019-0528-3⟩
Journal articles hal-02364824v1

Marine DNA Viral Macro- and Microdiversity from Pole to Pole

Ann Gregory , Ahmed Zayed , Nádia Conceição-Neto , Ben Temperton , Ben Bolduc et al.
Cell, 2019, 177 (5), pp.1109-1123.e14. ⟨10.1016/j.cell.2019.03.040⟩
Journal articles hal-02387010v1
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Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems

Antonietta Capotondi , Michael Jacox , Chris Bowler , Maria Kavanaugh , Patrick Lehodey et al.
Frontiers in Marine Science, 2019, 6, pp.623. ⟨10.3389/fmars.2019.00623⟩
Journal articles hal-02316446v1
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Arabidopsis S2Lb links AtCOMPASS-like and SDG2 activity in H3K4me3 independently from histone H2B monoubiquitination

Anne-Sophie Fiorucci , Clara Bourbousse , Lorenzo Concia , Martin Rougée , Anne-Flore Deton-Cabanillas et al.
Genome Biology, 2019, 20 (100), ⟨10.1186/s13059-019-1705-4⟩
Journal articles hal-02156634v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luigi Caputi , Quentin Carradec , Damien Eveillard , Amos Kirilovsky , Eric Pelletier et al.
Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩
Journal articles hal-02999805v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life

Federico Ibarbalz , Nicolas Henry , Manoela Brandão , Severine Martini , Greta Busseni et al.
Cell, 2019, 179 (5), pp.1084-1097.e21. ⟨10.1016/j.cell.2019.10.008⟩
Journal articles hal-03094778v1

Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom

Omer Murik , Leïla Tirichine , Judit Prihoda , Yann Thomas , Wagner Araújo et al.
New Phytologist, 2019, 221 (3), pp.1303-1316. ⟨10.1111/nph.15479⟩
Journal articles hal-02364894v1

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Guillem Salazar , Lucas Paoli , Adriana A. Alberti , Jaime Huerta-Cepas , Hans-Joachim Ruscheweyh et al.
Cell, 2019, 179 (5), pp.1068-1083.e21. ⟨10.1016/j.cell.2019.10.014⟩
Journal articles hal-02964513v1
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A Potential Role for Epigenetic Processes in the Acclimation Response to Elevated pCO2 in the Model Diatom Phaeodactylum tricornutum

Ruiping Huang , Jiancheng Ding , Kunshan Gao , Maria Helena Cruz de Carvalho , Leïla Tirichine et al.
Frontiers in Microbiology, 2019, 9, ⟨10.3389/fmicb.2018.03342⟩
Journal articles hal-02364855v1
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Competition between silicifiers and non-silicifiers in the past and present ocean and its evolutionary impacts

Katharine R Hendry , Alan O Marron , Flora Vincent , Daniel J Conley , Marion Gehlen et al.
Frontiers in Marine Science, 2018, 5, pp.22. ⟨10.3389/fmars.2018.00022⟩
Journal articles hal-01812492v1
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Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi , Yoshiaki Maeda , Tomoko Yoshino , Toru Asahi , Leila Tirichine et al.
BMC Genomics, 2018, 19 (1), pp.330. ⟨10.1186/s12864-018-4691-0⟩
Journal articles inserm-02063342v1
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The epibiotic life of the cosmopolitan diatom Fragilariopsis doliolus on heterotrophic ciliates in the open ocean

Flora J. Vincent , Sébastien Colin , Sarah Romac , Eleonora Scalco , Lucie Bittner et al.
ISME Journal, 2018, 12 (4), pp.1094 - 1108. ⟨10.1038/s41396-017-0029-1⟩
Journal articles hal-01762501v1

Neobodonids are dominant kinetoplastids in the global ocean

Olga Flegontova , Pavel Flegontov , Shruti Malviya , Julie Poulain , Colomban de Vargas et al.
Environmental Microbiology, 2018, 20 (2), pp.878-889. ⟨10.1111/1462-2920.14034⟩
Journal articles cea-02291359v1
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Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms

Achal Rastogi , Uma Maheswari , Richard Dorrell , Fabio Rocha Jimenez Vieira , Florian Maumus et al.
Scientific Reports, 2018, 8 (1), pp.1-14. ⟨10.1038/s41598-018-23106-x⟩
Journal articles hal-02366536v1

Comparative characterization of putative chitin deacetylases from Phaeodactylum tricornutum and Thalassiosira pseudonana highlights the potential for distinct chitin‐based metabolic processes in diatoms

Zhanru Shao , Yann Thomas , Lea Hembach , Xiaohui Xing , Delin Duan et al.
New Phytologist, 2018, 221 (4), pp.1890-1905. ⟨10.1111/nph.15510⟩
Journal articles hal-02364862v1
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

Yoann Seeleuthner , Samuel Mondy , Vincent Lombard , Quentin Carradec , Eric Pelletier et al.
Nature Communications, 2018, 9, pp.310. ⟨10.1038/s41467-017-02235-3⟩
Journal articles hal-01771839v1
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Influence of diatom diversity on the ocean biological carbon pump

Paul Tréguer , Chris Bowler , Brivaëla Moriceau , Stephanie Dutkiewicz , Marion Gehlen et al.
Nature Geoscience, 2018, 11 (1), pp.27-37. ⟨10.1038/s41561-017-0028-x⟩
Journal articles hal-01667978v1
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Ubiquitous abundance distribution of non-dominant plankton across the global ocean

Enrico Ser-Giacomi , Lucie Zinger , Shruti Malviya , Colomban de Vargas , Eric Karsenti et al.
Nature Ecology & Evolution, 2018, 2 (8), pp.1243-1249. ⟨10.1038/s41559-018-0587-2⟩
Journal articles hal-02364756v1
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Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export

Karine Leblanc , Bernard Queguiner , Frederic Diaz , Veronique Cornet , Mónica Michel-Rodriguez et al.
Nature Communications, 2018, 9 (1), pp.953. ⟨10.1038/s41467-018-03376-9⟩
Journal articles hal-02006275v1

Endocytosis-mediated siderophore uptake as a strategy for Fe acquisition in diatoms

Elena Kazamia , Robert Sutak , Javier Paz-Yepes , Richard Dorrell , Fabio Rocha Jimenez Vieira et al.
Science Advances , 2018, 4 (5), pp.eaar4536. ⟨10.1126/sciadv.aar4536⟩
Journal articles cea-01886772v1
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Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how the global shift in expression ascribed to DNA ploidy influences RNA-Seq data normalization and interpretation

Julien Pirrello , Cynthia Deluche , Nathalie Frangne , Frederic Gevaudant , Elie Maza et al.
Plant Journal, 2018, 93 (2), pp.387--398. ⟨10.1111/tpj.13783⟩
Journal articles hal-02183254v1
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DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis

Amr Nassrallah , Martin Rougée , Clara Bourbousse , Stéphanie Drevensek , Sandra Fonseca et al.
eLife, 2018, 7, pp.1-29. ⟨10.7554/eLife.37892⟩
Journal articles hal-01912108v1
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Quantitative 3D-imaging for cell biology and ecology of environmental microbial eukaryotes

Sébastien Colin , Luis Pedro Coelho , Shinichi Sunagawa , Chris Bowler , Eric Karsenti et al.
eLife, 2017, 6, pp.e26066. ⟨10.7554/eLife.26066⟩
Journal articles hal-01633659v1

The evolution of diatoms and their biogeochemical functions

Anne-Sophie Benoiston , Federico M Ibarbalz , Lucie Bittner , Lionel Guidi , Oliver Jahn et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2017, 372 (1728), pp.20160397. ⟨10.1098/rstb.2016.0397⟩
Journal articles hal-02921882v1
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Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Adriana A. Alberti , Julie Poulain , Stefan Engelen , Karine Labadie , Sarah Romac et al.
Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩
Journal articles hal-01771844v1

Modelling plankton ecosystems in the meta-omics era. Are we ready?

Krzysztof Franciszek Stec , Luigi Caputi , Pier Luigi Buttigieg , Domenico d'Alelio , Federico Matias Ibarbalz et al.
Marine Genomics, 2017, 32, pp.1-17. ⟨10.1016/j.margen.2017.02.006⟩
Journal articles hal-01584309v1

Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Thomas Mock , Robert P Otillar , Jan Strauss , Mark Mcmullan , Pirita Paajanen et al.
Nature, 2017, 541, pp.536-540. ⟨10.1038/nature20803⟩
Journal articles hal-01587937v1
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Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome

Richard G Dorrell , Gillian Gile , Giselle Mccallum , Raphaël Méheust , Eric P Bapteste et al.
eLife, 2017, 6, pp.e23717. ⟨10.7554/eLife.23717⟩
Journal articles hal-01526828v1

Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean

Antonio Emidio Fortunato , Marianne Jaubert , Gen Enomoto , Jean-Pierre Bouly , Raffaella Raniello et al.
The Plant cell, 2016, 28 (3), pp.616-628. ⟨10.1105/tpc.15.00928⟩
Journal articles hal-01528502v1

DNA DAMAGE BINDING PROTEIN2 Shapes the DNA Methylation Landscape

Catherine Schalk , Stéphanie Drevensek , Amira Kramdi , Mohamed Kassam , Ikhlak Ahmed et al.
The Plant cell, 2016, 28 (9), pp.2043-2059. ⟨10.1105/tpc.16.00474⟩
Journal articles hal-01601904v1

Insights into global diatom distribution and diversity in the world's ocean

Shruti Malviya , Eleonora Scalco , Stephane Audic , Flora Vincenta , Alaguraj Veluchamy et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (11), pp.E1516-E1525. ⟨10.1073/pnas.1509523113⟩
Journal articles hal-01545320v1
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PhytoCRISP-Ex: a web-based and stand-alone application to find specific target sequences for CRISPR/CAS editing

Achal Rastogi , Omer Murik , Chris Bowler , Leila Tirichine
BMC Bioinformatics, 2016, 17 (1), pp.261. ⟨10.1186/s12859-016-1143-1⟩
Journal articles inserm-02059918v1
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Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages

Magali Lescot , Pascal Hingamp , Kenji Kojima , Emilie Villar , Sarah Romac et al.
ISME Journal, 2016, 10 (5), pp.1134-1146. ⟨10.1038/ismej.2015.192⟩
Journal articles hal-02964380v1
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Plankton networks driving carbon export in the oligotrophic ocean

Lionel Guidi , Samuel Chaffron , Lucie Bittner , Damien Eveillard , Abdelhalim Larhlimi et al.
Nature, 2016, 532, pp.465-470. ⟨10.1038/nature16942⟩
Journal articles hal-01275276v1
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Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Francisco M. Cornejo-Castillo , Ana M. Cabello , Guillem Salazar , Patricia Sánchez-Baracaldo , Gipsi Lima-Mendez et al.
Nature Communications, 2016, 7, pp.11071. ⟨10.1038/ncomms11071⟩
Journal articles hal-01295207v1
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Ostreococcus tauri is a new model green alga for studying iron metabolism in eukaryotic phytoplankton

Gaëlle Lelandais , Ivo Scheiber , Javier Paz-Yepes , Jean-Claude Lozano , Hugo Botebol et al.
BMC Genomics, 2016, 17 (1), pp.319. ⟨10.1186/s12864-016-2666-6⟩
Journal articles hal-01313623v1

When everything is not everywhere but species evolve: an alternative method to model adaptive properties of marine ecosystems

Boris Sauterey , Ben A. Ward , Michael J. Follows , Chris Bowler , David Claessen et al.
Journal of Plankton Research, 2015, 37 (1), pp.28-47. ⟨10.1093/plankt/fbu078⟩
Journal articles hal-02560901v1

Membrane glycerolipid remodeling triggered by nitrogen and phosphorus starvation in Phaeodactylum tricornutum.

Heni Abida , Lina-Juana Dolch , Coline Meï , Valeria Villanova , Melissa Conte et al.
Plant Physiology, 2015, 167 (1), pp.118-36
Journal articles hal-01141164v1

Energetic coupling between plastids and mitochondria drives CO2 assimilation in diatoms.

Benjamin Bailleul , Nicolas Berne , Omer Murik , Dimitris Petroutsos , Judit Prihoda et al.
Nature, 2015, 524 (7565), pp.366-9. ⟨10.1038/nature14599⟩
Journal articles hal-01217578v1

Determinants of community structure in the global plankton interactome

Gipsi Lima-Mendez , Karoline Faust , Nicolas Henry , Johan Decelle , Sébastien Colin et al.
Science, 2015, 348 (6237), pp.1262073. ⟨10.1126/science.1262073⟩
Journal articles hal-01234200v1

Light signaling controls nuclear architecture reorganization during seedling establishment

Clara Bourbousse , Imen Mestiri , Gerald Zabulon , Mickaël Bourge , Fabio Formiggini et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (21), pp.E2836--E2844. ⟨10.1073/pnas.1503512112⟩
Journal articles hal-02394559v1

Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed by the genome and transcriptome.

Tsuyoshi Tanaka , Yoshiaki Maeda , Alaguraj Veluchamy , Michihiro Tanaka , Heni Abida et al.
The Plant cell, 2015, 27 (1), pp.162-76. ⟨10.1105/tpc.114.135194⟩
Journal articles hal-01142141v1

A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake.

Joe Morrissey , Robert Sutak , Javier Paz-Yepes , Atsuko Tanaka , Ahmed Moustafa et al.
Current Biology - CB, 2015, 25 (3), pp.364-71. ⟨10.1016/j.cub.2014.12.004⟩
Journal articles hal-01132526v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael Follows , Laurence Garczarek , Sabrina Speich et al.
Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩
Journal articles hal-01893637v1
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Open science resources for the discovery and analysis of Tara Oceans data

Stéphane Pesant , Fabrice Not , Marc Picheral , Stefanie Kandels-Lewis , Noan Le Bescot et al.
Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩
Journal articles hal-01253984v1
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Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Journal articles hal-01253979v1

Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton.

Hugo Botebol , Emmanuel Lesuisse , Robert Šuták , Christophe Six , Jean-Claude Lozano et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (47), pp.14652-7. ⟨10.1073/pnas.1506074112⟩
Journal articles hal-01267693v1
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Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages

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Protocol: Chromatin immunoprecipitation (ChIP) methodology to investigate histone modifications in two model diatom species.

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Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis

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H3K27me3 natural variation selectively marks genes predicted to be important for differentiation in unicellular algae

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Ecogenomics of key prokaryotes in the arctic ocean

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Tara Océans et son flot de données : vers une compréhension multi-échelle de l'écosystème océan

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Tara Oceans : de l’odyssée à l’étude systémique de l’océan

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