Christian VESTERGAARD

Publications
27
Documents

Publications

Publications

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Statistical signature of subtle behavioural changes in large-scale behavioural assays

Alexandre Blanc , François Laurent , Alex Barbier--Chebbah , Benjamin Cocanougher , Benjamin M.W. Jones et al.
PLoS Computational Biology, 2025, 21 (4), pp.e1012990. ⟨10.1371/journal.pcbi.1012990⟩
Article dans une revue hal-04670703 v1
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Compression-based inference of network motif sets

Alexis Bénichou , Jean-Baptiste Masson , Christian L. Vestergaard
PLoS Computational Biology, 2024, 20 (10), pp.e1012460. ⟨10.1371/journal.pcbi.1012460⟩
Article dans une revue hal-04733164 v2
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LarvaTagger: Manual and automatic tagging of Drosophila larval behaviour

François Laurent , Alexandre Blanc , Lilly May , Lautaro Gándara , Benjamin Cocanougher et al.
Bioinformatics, 2024, 40 (7), pp.btae441. ⟨10.1093/bioinformatics/btae441⟩
Article dans une revue pasteur-04629791 v1
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Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics

Hippolyte Verdier , François Laurent , Alhassan Cassé , Christian L. Vestergaard , Christian Specht et al.
PLoS Computational Biology, 2023, 19 (2), pp.e1010088. ⟨10.1371/journal.pcbi.1010088⟩
Article dans une revue hal-03876446 v2
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Approximate information for efficient exploration-exploitation strategies

Alex Barbier-Chebbah , Christian L. Vestergaard , Jean-Baptiste Masson
Physical Review E , 2023, 109 (5), pp.L052105. ⟨10.1103/PhysRevE.109.L052105⟩
Article dans une revue hal-04147006 v1
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TRamWAy: mapping physical properties of individual biomolecule random motion in large-scale single-particle tracking experiments

François Laurent , Hippolyte Verdier , Maxime Duval , Alexander Serov , Christian L Vestergaard et al.
Bioinformatics, 2022, 38 (11), pp.3149-3150. ⟨10.1093/bioinformatics/btac291⟩
Article dans une revue pasteur-03695448 v1
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Variational inference of fractional Brownian motion with linear computational complexity

Hippolyte Verdier , François Laurent , Alhassan Cassé , Christian L Vestergaard , Jean-Baptiste Masson
Physical Review E , 2022, 106, pp.055311. ⟨10.1103/PhysRevE.106.055311⟩
Article dans une revue hal-03612918 v3

Hematopoietic stem cell transplantation chemotherapy causes microglia senescence and peripheral macrophage engraftment in the brain

Kurt A Sailor , George Agoranos , Sergio López-Manzaneda , Satoru Tada , Beatrix Gillet-Legrand et al.
Nature Medicine, 2022, ⟨10.1038/s41591-022-01691-9⟩
Article dans une revue pasteur-03588683 v1
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Randomized reference models for temporal networks

Laetitia Gauvin , Mathieu Génois , Marton Karsai , Mikko Kivelä , Taro Takaguchi et al.
SIAM Review, 2022, 64 (4), ⟨10.1137/19M1242252⟩
Article dans une revue hal-01817633 v4
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Learning physical properties of anomalous random walks using graph neural networks

Hippolyte Verdier , Maxime Duval , François Laurent , Alhassan Cassé , Christian L. Vestergaard et al.
Journal of Physics A: Mathematical and Theoretical, 2021, 54 (23), pp.234001. ⟨10.1088/1751-8121/abfa45⟩
Article dans une revue pasteur-03150190 v2
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Statistical Tests for Force Inference in Heterogeneous Environments

Alexander S Serov , François Laurent , Charlotte Floderer , Karen Perronet , Cyril Favard et al.
Scientific Reports, 2020, 10 (1), pp.3783. ⟨10.1038/s41598-020-60220-1⟩
Article dans une revue pasteur-02865729 v1
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Mapping spatio-temporal dynamics of single biomolecules in living cells

François Laurent , Charlotte Floderer , Cyril Favard , Delphine Muriaux , Jean-Baptiste Masson et al.
Physical Biology, 2020, 17 (1), pp.015003. ⟨10.1088/1478-3975/ab5167⟩
Article dans une revue pasteur-02408362 v1
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Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA

Christian L. Vestergaard , Paul C Blainey , Henrik Flyvbjerg
Nucleic Acids Research, 2018, pp.gky004. ⟨10.1093/nar/gky004⟩
Article dans une revue hal-01690314 v1

Impact of spatially constrained sampling of temporal contact networks on the evaluation of the epidemic risk

Christian L. Vestergaard , Eugenio Valdano , Mathieu Génois , Chiara Poletto , Vittoria Colizza et al.
European Journal of Applied Mathematics, 2016, 27 (6), pp.941-957. ⟨10.1017/S0956792516000309⟩
Article dans une revue hal-01342800 v1
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Transition state theory demonstrated at the micron scale with out-of-equilibrium transport in a confined environment

Christian L. Vestergaard , Morten Bo Mikkelsen , Walter Reisner , Anders Kristensen , Henrik Flyvbjerg
Nature Communications, 2016, 7, pp.10227. ⟨10.1038/ncomms10227⟩
Article dans une revue hal-01257781 v1
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Recalibrating disease parameters for increasing realism in modeling epidemics in closed settings

Livio Bioglio , Mathieu Génois , Christian L. Vestergaard , Chiara Poletto , Alain Barrat et al.
BMC Infectious Diseases, 2016, 16 (1), pp.676. ⟨10.1186/s12879-016-2003-3⟩
Article dans une revue inserm-01396695 v1
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Optimizing experimental parameters for tracking of diffusing particles

Christian L. Vestergaard
Physical Review E , 2016, 94 (2), pp.022401. ⟨10.1103/PhysRevE.94.022401⟩
Article dans une revue hal-01144950 v2
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Évaluer le risque épidémique à partir de données lacunaires

Mathieu Génois , Christian L. Vestergaard , Alain Barrat
Médecine/Sciences, 2016, 32 (5), pp.506. ⟨10.1051/medsci/20163205019⟩
Article dans une revue hal-01435397 v1

Estimation of motility parameters from trajectory data

Christian L. Vestergaard , Jonas N. Pedersen , Kim I. Mortensen , Henrik Flyvbjerg
The European Physical Journal. Special Topics, 2015, 224 (7), pp.1151-1168. ⟨10.1140/epjst/e2015-02452-5⟩
Article dans une revue hal-01212510 v1
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Temporal Gillespie algorithm: Fast simulation of contagion processes on time-varying networks

Christian L. Vestergaard , Mathieu Génois
PLoS Computational Biology, 2015, 11 (10), pp.e1004579. ⟨10.1371/journal.pcbi.1004579⟩
Article dans une revue hal-01140134 v2
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Harmonic force spectroscopy measures load-dependent kinetics of individual human b-cardiac myosin molecules

Jongmin Sung , Suman Nag , Kim I. Mortensen , Christian L. Vestergaard , Shirley Sutton et al.
Nature Communications, 2015, 6, pp.7931. ⟨10.1038/ncomms8931⟩
Article dans une revue hal-01190174 v1
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Compensating for population sampling in simulations of epidemic spread on temporal contact networks

Mathieu Génois , Christian L. Vestergaard , Ciro Cattuto , Alain Barrat
Nature Communications, 2015, 6, pp.8860
Article dans une revue hal-01131855 v1
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Data on face-to-face contacts in an office building suggests a low-cost vaccination strategy based on community linkers

Mathieu Génois , Christian L. Vestergaard , Julie Fournet , André Panisson , Isabelle Bonmarin et al.
Network Science, 2015, 3 (3), pp.326-347. ⟨10.1017/nws.2015.10⟩
Article dans une revue hal-01113431 v1
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How memory generates heterogeneous dynamics in temporal networks

Christian L. Vestergaard , Mathieu Génois , Alain Barrat
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2014, 90 (4), pp.042805. ⟨10.1103/PhysRevE.90.042805⟩
Article dans une revue hal-01061650 v1
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Gillespie Algorithms for Stochastic Multiagent Dynamics in Populations and Networks

Naoki Masuda , Christian L. Vestergaard
Cambridge University Press, 2022, Cambridge Elements: The Structure and Dynamics of Complex Networks, Guido Caldarelli, 978-1-009-23915-8 (ebook). ⟨10.1017/9781009239158⟩
Ouvrages pasteur-03992050 v1