CHRISTOPHE BOURY

Publications

Article dans une revue (22)

Sequencing, de novo assembly of Ludwigia plastomes, and comparative analysis within the Onagraceae family F Barloy-Hubler,A.-L Le Gac,Christophe C. Boury,Erwan Guichoux,D Barloy Peer Community In Genomics, 2025, e43, ⟨10.24072/pci.genomics.100334⟩ Article dans une revue hal-05068858v2
A Strategy for Studying Epigenetic Diversity in Natural Populations: Proof of Concept in Poplar and Oak Isabelle Lesur Kupin,Odile Rogier,Mamadou Dia Sow,Christophe Boury,Alexandre Duplanet al. Journal of Experimental Botany, 2024, 75 (18), pp.5568-5584. ⟨10.1093/jxb/erae266⟩ Article dans une revue hal-04621404v1
Dataset describing the effects of housing environment, dominance status and parity on the PBMC transcriptome of sows during gestation and lactation Mariana Mescouto Lopes,Annie Vincent,Francoise Thomas,Caroline Clouard,Raphaël Comteet al. Animal - Open Space, 2024, 3, pp.100078. ⟨10.1016/j.anopes.2024.100078⟩ Article dans une revue (data paper) hal-04693509v1
Comparative genomics of Mycoplasma feriruminatoris, a fast-growing pathogen of wild Caprinae Vincent Baby,Chloé Ambroset,Patrice Gaurivaud,Laurent Falquet,Christophe Bouryet al. Microbial Genomics, 2023, 9 (10), ⟨10.1099/mgen.0.001112⟩ Article dans une revue hal-04323203v1
Fruit fly phylogeny imprints bacterial gut microbiota Virginie Ravigné,Nathalie Becker,François Massol,Erwan Guichoux,Christophe Bouryet al. Evolutionary Applications, 2022, 15 (10), pp.1621-1638. ⟨10.1111/eva.13352⟩ Article dans une revue hal-03640460v1
Evidence of local adaptation despite strong drift in a Neotropical patchily distributed bromeliad Bárbara Simões Santos Leal,Cleber Juliano Neves Chaves,Vanessa Araujo Graciano,Christophe Boury,Luis Alberto Pillaca Huacreet al. Heredity, In press, pp.1-15. ⟨10.1038/s41437-021-00442-9⟩ Article dans une revue hal-03227188v1
Coupling ecological network analysis with high-throughput sequencing-based surveys: Lessons from the next-generation biomonitoring project Maxime Dubart,Pascal Alonso,Didac Barroso-Bergadà,N. Becker,Kévin Béthuneet al. Advances in Ecological Research, 2021, Advances in Ecological Research, 65, pp.367-430. ⟨10.1016/bs.aecr.2021.10.007⟩ Article dans une revue (article de synthèse) hal-03634351v1
Fast sequence-based microsatellite genotyping development workflow Olivier Lepais,Emilie Chancerel,Christophe Boury,Franck Salin,Aurélie Manickiet al. PeerJ, 2020, 8, pp.1-28. ⟨10.7717/peerj.9085⟩ Article dans une revue hal-02936408v1
Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand Isabelle Lesur Kupin,Hermine Alexandre,Christophe Boury,Emilie Chancerel,Christophe Plomionet al. Frontiers in Plant Science, 2018, 9, pp.1-16. ⟨10.3389/fpls.2018.00996⟩ Article dans une revue hal-02628743v1
Performance of genomic prediction within and across generations in maritime pine Jérôme Bartholomé,Joost van Heerwaarden,Fikret Isik,Christophe C. Boury,Marjorie Vidalet al. BMC Genomics, 2016, 17 (1), 14 p. ⟨10.1186/s12864-016-2879-8⟩ Article dans une revue hal-02636107v1
High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster) Christophe Plomion,Jérôme Bartholomé,Isabelle Lesur Kupin Lesur,Christophe C. Boury,Isabel Rodríguez-Quilónet al. Molecular Ecology Resources, 2016, 16 (2), pp.574-587. ⟨10.1111/1755-0998.12464⟩ Article dans une revue istex hal-02640393v2
Linkage and association mapping for two major traits used in the maritime pine breeding program: height growth and stem straightness. Jérôme Bartholome,Marco Cam Bink,Joost van Heerwaarden,Emilie Chancerel,Christophe Bouryet al. PLoS ONE, 2016, 11 (11), 21 p. ⟨10.1371/journal.pone.0165323⟩ Article dans une revue hal-02636715v1
Paternity recovery in two maritime pine polycross mating designs and consequences for breeding Marjorie Vidal,Christophe Plomion,Luc Harvengt,Annie A. Raffin,Christophe C. Bouryet al. Tree Genetics and Genomes, 2015, 11 (5), 13 p. ⟨10.1007/s11295-015-0932-4⟩ Article dans une revue hal-02634494v1
Nucleotide polymorphisms in a pine ortholog of the Arabidopsis degrading enzyme cellulase KORRIGAN are associated with early growth performance in Pinus pinaster José Antonio Cabezas,Santiago C. González-Martínez,Carmen Collada,María Angeles Guevara,Christophe C. Bouryet al. Tree Physiology, 2015, 35 (9), pp.1000-1006. ⟨10.1093/treephys/tpv050⟩ Article dans une revue hal-02640523v1
Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies. Christophe Plomion,Jean-Marc Aury,Joëlle Amselem,Tina Alaeitabar,Valérie Barbeet al. Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩ Article dans une revue istex hal-01579667v1
Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks Camille Lepoittevin,Catherine Bodenes-Brezard Bodénès,Emilie E. Chancerel,Laure Villate,Tiange Langet al. Molecular Ecology Resources, 2015, 15 (6), pp.1446-1459. ⟨10.1111/1755-0998.12407⟩ Article dans une revue istex hal-02635881v1
Imprints of natural selection along environmental gradients in phenology-related genes of Quercus petraea Florian Alberto,Jérémy Derory,Christophe C. Boury,Jean-Marc Frigerio,Niklaus E. Zimmermannet al. Genetics, 2013, 195 (2), pp.495-512. ⟨10.1534/genetics.113.153783⟩ Article dans une revue hal-02649035v1
High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination Emilie E. Chancerel,Jean-Baptiste J.-B. Lamy,Isabelle Lesur Kupin Lesur,Celine C. Noirot,Christophe Kloppet al. BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩ Article dans une revue hal-00964786v1
Outlier loci highlight the direction of introgression in oaks Erwan Guichoux,Pauline Garnier‐géré,Lelia L. Lagache,Tiange Lang,Christophe C. Bouryet al. Molecular Ecology, 2013, 22 (2), pp.450-62. ⟨10.1111/mec.12125⟩ Article dans une revue istex hal-02646008v1
Comparative mapping in the Fagaceae and beyond with EST-SSRs Catherine Bodenes-Brezard Bodénès,Emilie E. Chancerel,Oliver O. Gailing,Giovanni G. G. G. Vendramin,Francesca F. Bagnoliet al. BMC Plant Biology, 2012, 12 (153), 40 p. ⟨10.1186/1471-2229-12-153⟩ Article dans une revue hal-00964224v1
Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine Emilie E. Chancerel,Camille Lepoittevin,Grégoire G. Le Provost,Yao-Cheng Lin,Juan Pablo Jaramillo-Correaet al. BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩ Article dans une revue hal-02649406v1
Genetic dissection of sex determinism, inflorescence morphology and downy mildew resistance in grapevine Elisa E. Marguerit,Christophe C. Boury,Aurélie Manicki,Martine Donnart,Gisele Butterlinet al. TAG Theoretical and Applied Genetics, 2009, 118 (7), pp.1261-1278. ⟨10.1007/s00122-009-0979-4⟩ Article dans une revue istex hal-02665790v1

Vidéo (1)

Vidéo de présentation - Plateforme Génome Transcriptome de Bordeaux (PGTB) Erwan Le Gac,Préscillia Alves Gomes,Christophe Boury,Emilie Chancerel,Zoé Compagnieet al. 2025 Vidéo hal-05426257v1

Poster de conférence (8)

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra) Mamadou Dia Sow,Odile Rogier,Isabelle Lesur,Christian Daviaud,Emile Mardocet al. Plant Epigenetics (EPIPLANT/SEB 2024), Jul 2024, Clermont-Ferrand, France. , Abstract book of EPIPLANT/SEB 2024, Session VI Chromatin in transcription, replication and repair (Poster #69), pp.131-132 Poster de conférence hal-05056784v1
Comparative genomic of Mycoplasma feriruminatoris, a mycoides-related pathogen of wild caprinae Vincent Baby,Chloé Ambroset,Patrice Gaurivaud,Laurent Falquet,Christophe Bouryet al. 23. Congress of the International Organization for Mycoplasmology (IOM) (Virtual), Nov 2021, Tel Aviv, Israel Poster de conférence hal-04694254v1
Fast sequence-based microsatellite genotyping development workflow for any non-model species Olivier Lepais,Emilie Chancerel,Christophe Boury,Franck Salin,Aurélie Manickiet al. 5. Colloque du GDR Génomique environnementales, 2019, La Rochelle, France. 2019 Poster de conférence hal-02791502v1
Human mitochondrial DNA sequencing by Oxford Nanopore MinION A. Trimouille,Charlotte Mouden,Christophe Boury,A. Courreges,P. Fergelotet al. 51. Conference of the European-Society-of-Human-Genetics (ESHG) in conjunction with European Meeting on Psychosocial Aspects of Genetics (EMPAG), Jun 2018, Milan, Italy. Nature Publishing Group, European Journal of Human Genetics, 27 (Supplement), 688 p., 2019 Poster de conférence hal-02736180v1
Accuracy of genomic prediction in a multi-generation population of maritime pine Jérôme Bartholomé,Fikret Isik,Joost van Heerwaarden,Annie A. Raffin,Christophe C. Bouryet al. Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts Poster de conférence hal-02741597v1
Genomic prediction in a multi-generation breeding population: maritime pine as a case study Jérôme Bartholomé,Christophe C. Boury,Joost van Heerwaarden,Fikret Isik,Christophe Plomionet al. IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery, Jun 2015, Florence, Italy. 2015, ⟨10.15454/1.5137759036095466E12⟩ Poster de conférence hal-02798013v1
Genotyping By Sequencing development for Salmo salar: A simulation-based predictive approach using the R package SimRAD. Olivier Lepais,Franck F. Salin,Christophe C. Boury,Erwan Guichoux,Yec'Han Laizetet al. 2. International Conference on Integrative Salmonid Biology, Jun 2014, Vancouver, Canada. , 2014 Poster de conférence hal-02799311v1
Exploring phenotypic and molecular plasticity to osmotic stress in a Mediterranean pine Philippe Chaumeil,Christophe C. Boury,Manon M. Moreau,Marie Foulongne,José Carlos Rodrigueset al. 15. International conference of the Plant and Animal Genome, Jan 2007, San Diego, France. , 1 p., 2007 Poster de conférence hal-02824650v1

Communication dans un congrès (15)

A DNA-capture approach for detection and genome-wide sequencing of Flavescence dorée phytoplasma Pascal Salar,Christophe Boury,Zoé Delporte,Erwan Guichoux,Blanchandin Emilieet al. 6th European Bois Noir workshop and 1st International Pro-AECOGY conference, UMR-1332 Fruit Biology and Pathology, University of Bordeaux and INRAE, May 2024, Bordeaux (France), France. pp.96-97 Communication dans un congrès hal-04650406v1
Whole platelet transcriptome profiling confirms a cytoskeleton remodeling in platelet components associated with adverse transfusion reactions D. Awounou,C. Barlier,C. Aloui,J. Fagan,F. Salinet al. 52. Conference of the European-Society-of-Human-Genetics (ESHG), Jun 2019, Gothenburg, Sweden. pp.1 Communication dans un congrès hal-02737367v1
Génotypage de microsatellites par séquençage : aspects méthodologiques et analytiques Olivier Lepais,Christophe Boury,Emilie Chancerel,Aurélie Manicki,Franck Salinet al. Réunion du réseau de génétique du Département EFPA, May 2018, Avignon, France Communication dans un congrès hal-02791698v1
Développement rapide de marqueurs SNP pour l’aide à la gestion de la truite commune (Salmo trutta L.) dans le bassin de l’Adour Charlotte Urien,Joëlle Chat,Aurélie Manicki,Christophe Boury,Franck Salinet al. 38. Réunion Annuelle du Groupe d'Etude de Biologie et Génétique des Populations, Jun 2017, Paris Saclay, France Communication dans un congrès hal-01603236v1
A comprehensive evaluation of SNP markers for the conservation and genetic monitoring of the critically andangered European sturgeon Séverine Roques,Emilie Chancerel,Christophe C. Boury,Eric Rochard,Marie-Laure Acolas ISS8 8th International Symposium on Sturgeons, Sep 2017, Vienna, Austria. pp.1 Communication dans un congrès hal-02607395v1
Use of molecular markers to enhance genetic gains in the maritime pine breeding program Laurent Bouffier,Marjorie Vidal,Jérôme Bartholomé,Christophe C. Boury,Annie A. Raffinet al. Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p Communication dans un congrès hal-02741050v1
Paternity recovery in a maritime pine polycross trial and consequences for breeding Marjorie Vidal,Luc Harvengt,Christophe C. Boury,Laurent Bouffier Meeting of IUFRO, Jun 2015, Florence, Italy Communication dans un congrès hal-02799542v1
Integration of molecular tools into the maritime pine breeding program in France Jérôme Bartholomé,Marjorie Vidal,Annie Raffin,Isabelle Lesur Kupin Lesur,Christophe C. Bouryet al. ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p Communication dans un congrès hal-02738881v1
Can genomics simplify current breeding without the cost of a genome-wide approach? Laurent Bouffier,Marjorie Vidal,Jérôme Bartholomé,Christophe C. Boury,Christophe Plomion ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p Communication dans un congrès hal-02743400v1
Simulation pour la prévision du nombre de locus ciblés par les approches de Génotypage par Séquençage Olivier Lepais,Franck F. Salin,Christophe C. Boury,Erwan Guichoux,Yec'Han Laizetet al. Réunion du réseau de génétique du Département EFPA, Nov 2014, Nancy, France Communication dans un congrès hal-02799259v1
The genetics of water‐use efficiency in maritime pine and its relation to growth Elisa E. Marguerit,Laurent Bouffier,Emilie E. Chancerel,Christophe C. Boury,P. Costaet al. Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology: New synergies to tackle the impact of climate change in the 21st century", Oct 2012, Helsinki, Finland. 69 p Communication dans un congrès hal-02749305v1
Genetic association for growth and biomass in maritime pine J.A. Cabezas,S.C. González‐martínez,C. Collada,Camille Lepoittevin,Christophe C. Bouryet al. Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p Communication dans un congrès hal-02748063v1
Phenotypic variability among wild Vitis species: a tool to study some mechanisms underlying berry development and composition Nathalie Ollat,Stephane Decroocq,Louis Bordenave,Ghislaine Hilbert,Cyril Hevinet al. 2. Rencontres Annuelles de l'ISVV, Institut des Sciences de la Vigne et du Vin (ISVV). FRA., Jul 2010, Villenave d'Ornon, France Communication dans un congrès hal-02817846v1
Candidate gene mapping in pedunculate oak (Quercus robur L.) Emilie E. Chancerel,Christophe C. Boury,Florian Alberto,Jérôme J. Durand,Antoine Kremeret al. Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain Communication dans un congrès hal-02752968v1
Cartographie génétique et localisation des QTLs pour le caractère de vigueur propre et conférée chez le porte-greffe de la vigne Stephane Decroocq,Christophe Boury,Aurélie Manicki,Martine Donnart,Louis Bordenaveet al. 7. Symposium International d'Oenologie, Jun 2003, Bordeaux, France Communication dans un congrès hal-02758766v1

Pré-publication, Document de travail (1)

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra) Mamadou Dia Sow,Odile Rogier,Isabelle Lesur,Christian Daviaud,Emile Mardocet al. 2023 Pré-publication, Document de travail hal-04170410v1

Rapport (2)

Utilisation de la PCR quantitative en temps réel pour valider l'expression différentielle de gènes chez des plantules de pin maritime soumis à un stress hydrique Christophe C. Boury [Stage] Université de Bordeaux Ségalen (Bordeaux 2), Bordeaux, FRA. 2004, 28 p Rapport hal-02826721v1
Contribution à la construction d'un micro-réseau à ADNc pour l'étude du transcriptome du pin maritime en condition de stress hydrique Christophe Boury [Stage] Université Paris Diderot - Paris 7 (UPD7), Paris, FRA. 2003, 68 p Rapport hal-02831157v1