Christophe Merlin

Publications

Article dans une revue (62)

Towards One Health action for addressing antimicrobial resistance in the age of polycrisis Ishi Keenum,Thomas Berendonk,Jonas Bonnedahl,Eddie Cytryn,Christophe Dagotet al. Nature Sustainability, 2026, 9 (1), pp.24-34. ⟨10.1038/s41893-025-01753-z⟩ Article dans une revue hal-05483666v1
Biodiversity-dependent invasiveness of naive river epilithic biofilms by anthropogenic antibiotic resistance at the interface between the human, animal and environmental spheres Frédérique Changey,Elisa Catão Caldeira Pires,Manon Grange,Mai-Lan Tran,Sabine Delannoyet al. Science of the Total Environment, 2026, 1012, pp.181237. ⟨10.1016/j.scitotenv.2025.181237⟩ Article dans une revue hal-05483660v1
Identifying the Effects of Fish and Rhizosphere on the Structure of the Planktonic Bacterial Communities and Resistome in an Aquaponics Recirculation Loop Frédérique Changey,Christophe Merlin,Camille Fourrier,Pascal Fontaine,Laurence Mathieu Environmental Microbiology Reports, 2025, 17 (4), pp.e70128. ⟨10.1111/1758-2229.70128⟩ Article dans une revue hal-05164649v1
Environmental microbiome diversity and stability is a barrier to antimicrobial resistance gene accumulation Uli Klümper,Giulia Gionchetta,Elisa C. P. Catão,Xavier Bellanger,Irina Dielacheret al. Communications Biology, 2024, 7 (1), pp.706. ⟨10.1038/s42003-024-06338-8⟩ Article dans une revue hal-05021019v1
Microbiome and Resistome Profiles along a Sewage-Effluent-Reservoir Trajectory Underline the Role of Natural Attenuation in Wastewater Stabilization Reservoirs Inês Leão,Leron Khalifa,Nicolas Gallois,Ivone Vaz-Moreira,Uli Klümperet al. Applied and Environmental Microbiology, 2023, 89 (6), pp.e00170-23. ⟨10.1128/aem.00170-23⟩ Article dans une revue hal-05483686v1
Environmental stress increases the invasion success of antimicrobial resistant bacteria in river microbial communities Kenyum Bagra,Xavier Bellanger,Christophe Merlin,Gargi Singh,Thomas Berendonket al. Science of the Total Environment, 2023, 904, pp.166661. ⟨10.1016/j.scitotenv.2023.166661⟩ Article dans une revue hal-05483679v1
Layered Double Hydroxides (LDH) as nanocarriers for antimicrobial chemotherapy: From formulation to targeted applications Grégory Francius,Erwan André,Samantha Soulé,Christophe Merlin,Cédric Carteret Materials Chemistry and Physics, 2022, pp.126965. ⟨10.1016/j.matchemphys.2022.126965⟩ Article dans une revue hal-03838221v1
EpicPCR 2.0: Technical and Methodological Improvement of a Cutting-Edge Single-Cell Genomic Approach Véronica Roman,Christophe Merlin,Marko Virta,Xavier Bellanger Microorganisms, 2021, 9 (8), pp.1649. ⟨10.3390/microorganisms9081649⟩ Article dans une revue hal-03314701v1
Identification of antibiotics triggering the dissemination of antibiotic resistance genes by SXT/R391 elements using a dedicated high-throughput whole-cell biosensor assay Hélène Guilloteau,Cédric Pradalier,Véronica Roman,Xavier Bellanger,Patrick Billardet al. Journal of Antimicrobial Chemotherapy, 2021, ⟨10.1093/jac/dkab374⟩ Article dans une revue hal-03406207v1
Abundance and environmental host range of the SXT/R391 ICEs in aquatic environmental communities Veronica Roman,Christophe Merlin,Sandrine Baron,Emeline Larvor,Laetitia Le Devendecet al. Environmental Pollution, 2021, 288, pp.117673. ⟨10.1016/j.envpol.2021.117673⟩ Article dans une revue hal-03280978v1
A Comparative Study of Water Dispersible Orange-Emitting Mn-Doped ZnSe/ZnS and CdTe/CdS Core/Shell Quantum Dots Aboulaich Abdelhay,Christophe Merlin,Raphaël Schneider Journal of Nanotechnology in Diagnosis and Treatment, 2021, 7, pp.1-9. ⟨10.12974/2311-8792.2021.07.1⟩ Article dans une revue hal-03322272v1
La dissémination de l’antibiorésistance en milieu piscicole Christophe Merlin,Xavier Bellanger Les cahiers de la Recherche : Santé, Environnement, Travail, 2021, Les contaminants chimiques seuls ou en mélange, 16, pp.21-23 Article dans une revue anses-03209369v1
F-Specific RNA Bacteriophage Transport in Stream Water: Hydro-Meteorological Controls and Association with Suspended Solids Núria Martínez-Carreras,Leslie Ogorzaly,Cécile Walczak,Christophe Merlin,Emmanuelle Montargès-Pelletieret al. Water, 2021, 13 (16), pp.2250. ⟨10.3390/w13162250⟩ Article dans une revue hal-03322835v1
Cell-Free DNA: An Underestimated Source of Antibiotic Resistance Gene Dissemination at the Interface Between Human Activities and Downstream Environments in the Context of Wastewater Reuse Markus Woegerbauer,Xavier Bellanger,Christophe Merlin Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.00671⟩ Article dans une revue hal-02550229v1
Inter-laboratory calibration of quantitative analyses of antibiotic resistance genes Jaqueline Rocha,Damiano Cacace,Ioannis Kampouris,Hélène Guilloteau,Thomas Jägeret al. Journal of Environmental Chemical Engineering, 2020, 8 (1), pp.102214. ⟨10.1016/j.jece.2018.02.022⟩ Article dans une revue hal-03322844v1
A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants Roberto B.M. Marano,Telma Fernandes,Célia Manaia,Olga C Nunes,Donald Morrisonet al. Environment International, 2020, 144, pp.106035. ⟨10.1016/j.envint.2020.106035⟩ Article dans une revue hal-02931405v1
Reducing the Consumption of Antibiotics: Would That Be Enough to Slow Down the Dissemination of Resistances in the Downstream Environment? Christophe Merlin Frontiers in Microbiology, 2020, 11, ⟨10.3389/fmicb.2020.00033⟩ Article dans une revue hal-02477836v1
Zn2+ leakage and photo-induced reactive oxidative species do not explain the full toxicity of ZnO core Quantum Dots Xavier Bellanger,Raphaël Schneider,Clément Dezanet,Boussad Arroua,Lavinia Balanet al. Journal of Hazardous Materials, 2020, 396, pp.122616. ⟨10.1016/j.jhazmat.2020.122616⟩ Article dans une revue hal-02550004v1
Antibiotic resistance genes in treated wastewater and in the receiving water bodies: A pan-European survey of urban settings Damiano Cacace,Despo Fatta-Kassinos,Célia Manaia,Eddie Cytryn,Norbert Kreuzingeret al. Water Research, 2019, 162, pp.320-330. ⟨10.1016/j.watres.2019.06.039⟩ Article dans une revue hal-02270219v1
Suspended Materials in River Waters Differentially Enrich Class 1 Integron- and IncP-1 Plasmid-Carrying Bacteria in Sediments Magali de La Cruz Barrón,Christophe Merlin,Hélène Guilloteau,Emmanuelle Montarges-Pelletier,Xavier Bellanger Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.01443⟩ Article dans une revue hal-01899212v1
ZnO Nanorods with High Photocatalytic and Antibacterial Activity under Solar Light Irradiation Faouzi Achouri,Christophe Merlin,Serge Corbel,Halima Alem,Laurence Mathieuet al. Materials, 2018, 11 (11), pp.2158. ⟨10.3390/ma11112158⟩ Article dans une revue hal-01910693v1
Comparing TiO2 photocatalysis and UV-C radiation for inactivation and mutant formation of Salmonella typhimurium TA102 Antonino Fiorentino,Luigi Rizzo,Hélène Guilloteau,Xavier Bellanger,Christophe Merlin Environmental Science and Pollution Research, 2017, 24 (2), pp.1871 - 1879. ⟨10.1007/s11356-016-7981-6⟩ Article dans une revue hal-01767777v1
Inducibility of Tn916 conjugative transfer in Enterococcus faecalis by subinhibitory concentrations of ribosome-targeting antibiotics Helene H. Scornec,Xavier Bellanger,Hélène Guilloteau,Guillaume Groshenry,Christophe Merlin Journal of Antimicrobial Chemotherapy, 2017, 72 (10), pp.2722 - 2728. ⟨10.1093/jac/dkx202⟩ Article dans une revue hal-01767795v1
Trace amounts of Cu2+ ions influence ROS production and cytotoxicity of ZnO quantum dots Hatem Moussa,Christophe Merlin,Clément Dezanet,Lavinia Balan,Ghouti Medjahdiet al. Journal of Hazardous Materials, 2016, 304, pp.532-542. ⟨10.1016/j.jhazmat.2015.11.013⟩ Article dans une revue istex hal-01235944v1
High Throughput Analysis of Integron Gene Cassettes in Wastewater Environments Joao Gatica,Vijay Tripathi,Stefan Green,Celia Manaia,Thomas Berendonket al. Environmental Science and Technology, 2016, 50 (21), pp.11825-11836. ⟨10.1021/acs.est.6b03188⟩ Article dans une revue hal-03326444v1
Deciphering the aggregation mechanism of bacteria (Shewanella oneidensis MR1) in the presence of polyethyleneimine: Effects of the exopolymeric superstructure and polymer molecular weight Marie-Eve Krapf,Bruno Lartiges,Christophe Merlin,Gregory Francius,Jaafar Ghanbajaet al. Colloids and Surfaces B: Biointerfaces, 2016, 139, pp.285-293. ⟨10.1016/j.colsurfb.2015.12.015⟩ Article dans une revue hal-02145608v1
Chronic impact of sulfamethoxazole on the metabolic activity and composition of enriched nitrifying microbial culture Tugce Katipoglu-Yazan,Christophe Merlin,Marie-Noëlle Pons,Emine Ubay-Cokgor,Derin Orhon Water Research, 2016, 100, pp.546 - 555. ⟨10.1016/j.watres.2016.05.043⟩ Article dans une revue istex hal-01498155v1
Chronic impact of tetracycline on nitrification kinetics and the activity of enriched nitrifying microbial culture Tugce Katipoglu-Yazan,Christophe Merlin,Marie-Noelle Pons,Emine Ubay-Cokgor,Derin Orhon Water Research, 2015, 72 (SI), pp.227-238. ⟨10.1016/j.watres.2014.12.041⟩ Article dans une revue istex hal-01267217v1
Tackling antibiotic resistance: the environmental framework Thomas Berendonk,Célia Manaia,Christophe Merlin,Despo Fatta-Kassinos,Eddie Cytrynet al. Nature Reviews Microbiology, 2015, 13 (5), pp.310-317. ⟨10.1038/nrmicro3439⟩ Article dans une revue hal-01967015v1
Stability and toxicity of ZnO quantum dots: Interplay between nanoparticles and bacteria Xavier Bellanger,Patrick Billard,Raphaël Schneider,Lavinia Balan,Christophe Merlin Journal of Hazardous Materials, 2015, 283, pp.110-116. ⟨10.1016/j.jhazmat.2014.09.017⟩ Article dans une revue istex hal-01069257v1
Comparison of seven methods for extraction of bacterial DNA from fecal and cecal samples of mice Janina Ferrand,Kevin Patron,Christine Legrand-Frossi,Jean-Pol Frippiat,Christophe Merlinet al. Journal of Microbiological Methods, 2014, 105, pp.180-185. ⟨10.1016/j.mimet.2014.07.029⟩ Article dans une revue istex hal-02314539v1
Demonstrating plasmid-based horizontal gene transfer in complex environmental matrices: A practical approach for a critical review Xavier Bellanger,Hélène Guilloteau,Sébastien Bonot,Christophe Merlin Science of the Total Environment, 2014, 493, pp.872 - 882. ⟨10.1016/j.scitotenv.2014.06.070⟩ Article dans une revue istex hal-01498640v1
Incidence of the core composition on the stability, the ROS production and the toxicity of CdSe quantum dots Florence-Anais Kauffer,Christophe Merlin,Lavinia Balan,Raphaël Schneider Journal of Hazardous Materials, 2014, 268, pp.246-255. ⟨10.1016/j.jhazmat.2014.01.029⟩ Article dans une revue istex hal-00947704v1
Atypical stress response to temperature and NaOCl exposure leading to septation defect during cell division in Cupriavidus metallidurans CH34 Boussad Arroua,Xavier Bellanger,Hélène Guilloteau,Laurence Mathieu,Christophe Merlin FEMS Microbiology Letters, 2014, 353 (1), pp.33 - 39. ⟨10.1111/1574-6968.12399⟩ Article dans une revue hal-01912959v1
Natural microbial communities supporting the transfer of the IncP-1 beta plasmid pB10 exhibit a higher initial content of plasmids from the same incompatibility group Xavier Bellanger,Hélène Guilloteau,Berengere Breuil,Christophe Merlin Frontiers in Microbiology, 2014, 5, ⟨10.3389/fmicb.2014.00637⟩ Article dans une revue hal-01505218v1
Patterned Hydrophobic Domains in the Exopolymer Matrix of Shewanella oneidensis MR-1 Biofilms Fadi Aldeek,Raphaël Schneider,M.P. Fontaine-Aupart,Christian Mustin,Sandrine Lecartet al. Applied and Environmental Microbiology, 2013, 79 (4), pp.1400-1402. ⟨10.1128/AEM.03054-12⟩ Article dans une revue hal-00807989v1
Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: A review Luigi Rizzo,Célia Manaia,Christophe Merlin,Thomas Schwartz,Christophe Dagotet al. Science of the Total Environment, 2013, 447, pp.345-360. ⟨10.1016/j.scitotenv.2013.01.032⟩ Article dans une revue hal-01507505v1
Urban wastewater treatment plants as hotspots for the release of antibiotics in the environment: A review I. Michael,L. Rizzo,C. S. Mcardell,C. M. Manaia,C. Merlinet al. Water Research, 2013, 47 (3), pp.957-995. ⟨10.1016/j.watres.2012.11.027⟩ Article dans une revue hal-01507503v1
Impact of certain household micropollutants on bacterial behavior. Toxicity tests/study of extracellular polymeric substances in sludge Laure Pasquini,Christophe Merlin,Lucille Hassenboehler,Jean-François Munoz,Marie-Noëlle Ponset al. Science of the Total Environment, 2013, 463, pp.355-365. ⟨10.1016/j.scitotenv.2013.06.018⟩ Article dans une revue istex hal-01119459v1
Polyethyleneimine-mediated flocculation of Shewanella oneidensis MR-1: Impacts of cell surface appendage and polymer concentration Marie-Eve Krapf,Bruno Lartiges,Christophe Merlin,Gregory Francius,Jaafar Ghanbajaet al. Water Research, 2012, 46 (6), pp.1838-1846. ⟨10.1016/j.watres.2011.12.061⟩ Article dans une revue hal-02187084v1
Physicochemical properties and cellular toxicity of (poly)aminoalkoxysilanes-functionalized ZnO quantum dots Abdelhay Aboulaich,Carmen-Mihaela Tilmaciu,Christophe Merlin,Cédric Mercier,Hélène Guillotteauet al. Nanotechnology, 2012, 23, pp.335101. ⟨10.1088/0957-4484/23/33/335101⟩ Article dans une revue istex hal-00776199v1
Bacterial surface appendages strongly impact nanomechanical and electrokinetic properties of Escherichia coli cells subjected to osmotic stress. G. Francius,Pavel Polyakov,Jenny Merlin,Yumiko Abe,Jean-Marc Ghigoet al. PLoS ONE, 2011, 6 (5), pp.e20066. ⟨10.1371/journal.pone.0020066⟩ Article dans une revue pasteur-01393507v1
Aqueous Route to Biocompatible ZnSe:Mn/ZnO Core/Shell Quantum Dots Using 1-Thioglycerol As Stabilizer Abdelhay Aboulaich,Lavinia Balan,Jaafar Ghanbaja,Ghouti Medjadhi,Christophe Merlinet al. Chemistry of Materials, 2011, 23 (16), pp.3706-3713. ⟨10.1021/cm2012928⟩ Article dans une revue hal-00786198v1
Impact of Internal RNA on Aggregation and Electrokinetics of Viruses: Comparison between MS2 Phage and Corresponding Virus-Like Particles C. Dika,J. Duval,H. Ly-Chatain,C. Merlin,C. Gantzer Applied and Environmental Microbiology, 2011, 77 (14), pp.4939 - 4948. ⟨10.1128/AEM.00407-11⟩ Article dans une revue hal-01891208v1
Biocompatible and stable ZnO quantum dots generated by functionalization with siloxane-core PAMAM dendrons Ralph-Oliver Moussodia,Lavinia Balan,Christophe Merlin,Christian Mustin,Raphaël Schneider Journal of Materials Chemistry, 2010, 20 (6), pp.1147. ⟨10.1039/B917629B⟩ Article dans une revue istex hal-00786017v1
Improving the recovery of qPCR-grade DNA from sludge and sediment Sébastien Bonot,Sophie Courtois,Jean-Claude Block,Christophe Merlin Applied Microbiology and Biotechnology, 2010, 87 (6), pp.2303-2311. ⟨10.1007/s00253-010-2686-0⟩ Article dans une revue istex hal-03323112v1
Exposure of bacteria to CdTe quantum dots : the importance of surface chemistry on cytotoxicity Raphaël Schneider,Cécile Wolpert,Hélène Guilloteau,Lavinia Balan,Jacques Lambertet al. Nanotechnology, 2009, 20, pp.225101 Article dans une revue hal-00394055v1
Monitoring the Dissemination of the Broad-Host-Range Plasmid pB10 in Sediment Microcosms by Quantitative PCR S. Bonot,C. Merlin Applied and Environmental Microbiology, 2009, 76 (1), pp.378 - 382. ⟨10.1128/AEM.01125-09⟩ Article dans une revue hal-01849624v1
Assessment of Damage to Nucleic Acids and Repair Machinery in Salmonella typhimurium Exposed to Chlorine M. Phe,M. Hajj Chehade,H. Guilloteau,C. Merlin,J. Block International Journal of Microbiology, 2009, 2009, pp.1-5. ⟨10.1155/2009/201868⟩ Article dans une revue hal-03323114v1
Exposure of bacteria to CdTe-core quantum dots: the importance of surface chemistry on cytotoxicity Raphaël Schneider,Cécile Wolpert,Hélène Guilloteau,Lavinia Balan,Jacques Lambertet al. Nanotechnology, 2009, 20, pp.225101. ⟨10.1088/0957-4484/20/22/225101⟩ Article dans une revue istex hal-00371721v1
Why Is Carbonic Anhydrase Essential to Escherichia coli ? Christophe Merlin,Millicent Masters,Sean Mcateer,Andrew Coulson Journal of Bacteriology, 2003, 185 (21), pp.6415-6424. ⟨10.1128/JB.185.21.6415–6424.2003⟩ Article dans une revue hal-03323171v1
The Biphenyl- and 4-Chlorobiphenyl-Catabolic Transposon Tn 4371 , a Member of a New Family of Genomic Islands Related to IncP and Ti Plasmids Ariane Toussaint,Christophe Merlin,Sébastien Monchy,M. Abderrafi Benotmane,Raphaël Leplaeet al. Applied and Environmental Microbiology, 2003, 69 (8), pp.4837-4845. ⟨10.1128/AEM.69.8.4837–4845.2003⟩ Article dans une revue hal-03323166v1
Tools for Characterization of Escherichia coli Genes of Unknown Function Christophe Merlin,Sean Mcateer,Millicent Masters Journal of Bacteriology, 2002, 184 (16), pp.4573-4581. ⟨10.1128/JB.184.16.4573–4581.2002⟩ Article dans une revue hal-03323153v1
Mobile Elements as a Combination of Functional Modules Ariane Toussaint,Christophe Merlin Plasmid, 2002, 47 (1), pp.26-35. ⟨10.1006/plas.2001.1552⟩ Article dans une revue istex hal-03323151v1
The Escherichia coli metD Locus Encodes an ABC Transporter Which Includes Abc (MetN), YaeE (MetI), and YaeC (MetQ) Christophe Merlin,Gregory Gardiner,Sylvain Durand,Millicent Masters Journal of Bacteriology, 2002, 184 (19), pp.5513-5517. ⟨10.1128/JB.184.19.5513–5517.2002⟩ Article dans une revue hal-03323158v1
Occurrence of Tn 4371 -Related Mobile Elements and Sequences in (Chloro)biphenyl-Degrading Bacteria Dirk Springael,Annemie Ryngaert,Christophe Merlin,Ariane Toussaint,Max Mergeay Applied and Environmental Microbiology, 2001, 67 (1), pp.42-50. ⟨10.1128/AEM.67.1.42–50.2001⟩ Article dans une revue hal-03323148v1
Les éléments transposables bactériens. C Merlin,A Toussaint Médecine/Sciences, 1999, 15 (8-9), pp.I. ⟨10.4267/10608/1491⟩ Article dans une revue hal-03323136v1
Tn4371:A Modular Structure Encoding a Phage-like Integrase, aPseudomonas-like Catabolic Pathway, and RP4/Ti-like Transfer Functions Christophe Merlin,Dirk Springael,Ariane Toussaint Plasmid, 1999, 41 (1), pp.40-54. ⟨10.1006/plas.1998.1375⟩ Article dans une revue istex hal-03323133v1
A GntR-like negative regulator of the biphenyl degradation genes of the transposon Tn4371 S. Mouz,C. Merlin,D. Springael,A. Toussaint Molecular and General Genetics MGG, 1999, 262 (4-5), pp.790-799. ⟨10.1007/s004380051142⟩ Article dans une revue istex hal-03323138v1
Organisation of the bph gene cluster of transposon Tn4371, encoding enzymes for the degradation of biphenyl and 4-chlorobiphenyl compounds C. Merlin,D. Springael,M. Mergeay,A. Toussaint Molecular and General Genetics MGG, 1997, 253 (4), pp.499-506. ⟨10.1007/s004380050349⟩ Article dans une revue istex hal-03323132v1
Introduction of Pseudomonas aeruginosa mutator phage D3112 into Alcaligenes eutrophus strain CH34 V Krylov,C Merlin,A Toussaint Research in Microbiology, 1995, 146 (3), pp.245-250. ⟨10.1016/0923-2508(96)80280-4⟩ Article dans une revue istex hal-03323129v1
Characterization of a temperate phage hosted by Alcaligenes eutrophus strain A5 M Faelen,C Merlin,M Geuskens,M Mergeay,A Toussaint Research in Microbiology, 1993, 144 (8), pp.627-631. ⟨10.1016/0923-2508(93)90065-A⟩ Article dans une revue istex hal-03323121v1

Chapitre d'ouvrage (2)

Effect of Antibiotics on Biological Wastewater Treatment Processes Olivier Potier,Jean-Noel Louvet,Christophe Merlin,Marie-Noëlle Pons,Dominique Dumaset al. Goldstein, Walter E. Pharmaceutical Accumulation in the Environment: Prevention, Control, Health Effects, and Economic Impact, CRC press, pp.117-153, 2014, 978-1-4665-1775-2; 978-1-4665-1745-5 Chapitre d'ouvrage hal-01276650v1
Gene Recruiters and Transporters: the Modular Structure of Bacterial Mobile Elements C Merlin,J Mahillon,J. Nesvera,A Toussaint The Horizontal Gene Pool — Bacterial Plasmids and Gene Spread, pp.363-409, 2001, ⟨10.1046/j.1365-2540.2001.0902b.x⟩ Chapitre d'ouvrage hal-03323144v1