Cristian Chaparro BioinformaticienLaboratoire Interactions Hôte-Pathogènes-Environnement (IHPE)UMR5244

Publications

Article dans une revue (57)

Transcriptomic plasticity in hybrid schistosomes can contribute to their zoonotic potential Nelia Luviano Aparicio,Eglantine Mathieu-Bégné,Julien Kincaid-Smith,Olivier Rey,Marion A.L. Picardet al. Philosophical Transactions of the Royal Society B: Biological Sciences, 2026, 381 (1941), pp.20240534. ⟨10.1098/rstb.2024.0534⟩ Article dans une revue hal-05469047v1
Benchmarking of chromatin profiling methods (ChIP-Seq, CUT&Tag) in the Pacific oyster Magallana gigas Amélie Dellong,Manon Fallet,Pierre-Louis Stenger,Cristian Chaparro,Jeremie Vidal-Dupiolet al. Gene, 2026, 995, pp.150132. ⟨10.1016/j.gene.2026.150132⟩ Article dans une revue hal-05577277v1
Comprehensive identification and co-expression analysis of long non-coding RNAs across eight timepoints of Schistosoma mansoni life cycle Flávia Arêdes-Rocha,Cristian Chaparro,Christoph Grunau,Renata Guerra-Sá Memórias do Instituto Oswaldo Cruz, 2026, 121, ⟨10.1590/0074-02760250114⟩ Article dans une revue hal-05573436v1
Unveiling the hemolymphatic miRNome composition of the schistosomiasis vector snail Biomphalaria glabrata Sarah Dametto,Benjamin Gourbal,Cristian Chaparro,Silvain Pinaud,David Duval Current Research in Parasitology & Vector-Borne Diseases, 2025, 7, 100262 [14 p.]. ⟨10.1016/j.crpvbd.2025.100262⟩ Article dans une revue hal-05520725v1
Introduction of epigenetic variation contribute to resistance against the human parasite Schistosoma mansoni Nelia Luviano-Aparicio,Marie Lopez,Bart Haegeman,Pierick Mouginot,Cristian Chaparroet al. Epigenetics & Chromatin, 2025, 18 (1), pp.43. ⟨10.1186/s13072-025-00607-4⟩ Article dans une revue hal-05172481v1
Transcriptomic responses of Antarctic clam Laternula elliptica to nanoparticles, at single and combined exposures reveal ecologically relevant biomarkers Rodolfo Rondon,Catalina Valdés,Celine Cosseau,Elisa Bergami,César Antonio Cárdenaset al. Ecotoxicology and Environmental Safety, 2024, 280, pp.116523. ⟨10.1016/j.ecoenv.2024.116523⟩ Article dans une revue hal-04615510v1
Schistosoma haematobium and Schistosoma bovis first generation hybrids undergo gene expressions changes consistent with species compatibility and heterosis Eglantine Mathieu-Bégné,Julien Kincaid-Smith,Cristian Chaparro,Jean-François Allienne,Olivier REYet al. PLoS Neglected Tropical Diseases, 2024, 18 (7), pp.e0012267. ⟨10.1371/journal.pntd.0012267⟩ Article dans une revue hal-04639136v1
Epigenetic memory of temperature sensed during somatic embryo maturation in 2-yr-old maritime pine trees Jean-François Trontin,Mamadou Dia Sow,Alain Delaunay,Ines Modesto,Caroline Teyssieret al. Plant Physiology, 2024, 197 (2), pp.kiae600. ⟨10.1093/plphys/kiae600⟩ Article dans une revue hal-04911770v1
Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni T Brann,A Beltramini,Cristian Chaparro,M Berriman,S R Doyleet al. BMC Genomics, 2024, 25, pp.217. ⟨10.1186/s12864-024-10032-8⟩ Article dans une revue hal-04575780v1
Combining a transcriptomic approach and a targeted metabolomics approach for deciphering the molecular bases of compatibility phenotype in the snail Biomphalaria glabrata toward Schistosoma mansoni. Elodie Simphor,Anne Rognon,Emmanuel Vignal,Sylvain Henry,Jean-François Allienneet al. Acta Tropica, 2024, 255, pp.107212. ⟨10.1016/j.actatropica.2024.107212⟩ Article dans une revue hal-04555554v1
Cooperation and cheating orchestrate Vibrio assemblages and polymicrobial synergy in oysters infected with OsHV-1 virus Daniel Oyanedel,Arnaud Lagorce,Maxime Bruto,Philippe Haffner,Amandine Morotet al. Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (40), pp.e2305195120. ⟨10.1073/pnas.2305195120⟩ Article dans une revue hal-04219877v1
Targeted insertion and reporter transgene activity at a gene safe harbor of the human blood fluke, Schistosoma mansoni Wannaporn Ittiprasert,Max F Moescheid,Cristian Chaparro,Victoria H Mann,Rutchanee Rodpaiet al. Cell Reports Methods, 2023, 3 (7), pp.100535. ⟨10.1016/j.crmeth.2023.100535⟩ Article dans une revue hal-04181018v1
Hit-and-Run Epigenetic Editing for Vectors of Snail-Borne Parasitic Diseases Nelia Luviano,David Duval,Wannaporn Ittiprasert,Jean-François Allienne,Geneviève Tavernieret al. Frontiers in Cell and Developmental Biology, 2022, 10, pp.794650. ⟨10.3389/fcell.2022.794650⟩ Article dans une revue hal-03608918v1
Automated ChIPmentation procedure on limited biological material of the human blood fluke Schistosoma mansoni Chrystelle Lasica,Ronaldo de Carvalho Augusto,Hélène Moné,Gabriel Mouahid,Cristian Chaparroet al. Wellcome Open Research, 2022, 7, pp.133. ⟨10.12688/wellcomeopenres.17779.1⟩ Article dans une revue hal-03255320v2
Single cell RNA sequencing reveals hemocyte heterogeneity in Biomphalaria glabrata: Plasticity over diversity Remi Pichon,Silvain Pinaud,Emmanuel Vignal,Cristian Chaparro,Marine Pratlonget al. Frontiers in Immunology, 2022, 13, pp.956871. ⟨10.3389/fimmu.2022.956871⟩ Article dans une revue hal-03772193v1
From methylome to integrative analysis of tissue specificity Thomas Duge de Bernonville,Christian Daviaud,Cristian Chaparro,Jörg Tost,Stéphane Maury Methods in Molecular Biology, 2022, Catharanthus roseus Methods and Protocols, 2505, pp.223-240. ⟨10.1007/978-1-0716-2349-7_16⟩ Article dans une revue cea-04346942v1
Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection Manon Fallet,C. Montagnani,Bruno Petton,Luc Dantan,Julien de Lorgerilet al. Microbiome, 2022, 10, pp.85. ⟨10.1186/s40168-022-01280-5⟩ Article dans une revue hal-03635473v2
No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: From mating interactions to differential gene expression Julien Kincaid-Smith,Eglantine Mathieu-Bégné,Cristian Chaparro,Marta Reguera-Gomez,Stephen Muleroet al. PLoS Neglected Tropical Diseases, 2021, 15 (5), pp.e0009363. ⟨10.1371/journal.pntd.0009363⟩ Article dans une revue hal-03255515v1
The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor Nelia Luviano,Marie Lopez,Fleur Gawehns,Cristian Chaparro,Paola B Arimondoet al. Epigenetics & Chromatin, 2021, 14 (1), pp.48. ⟨10.1186/s13072-021-00422-7⟩ Article dans une revue pasteur-03427775v2
RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar Mamadou D. Sow,Anne‐laure Le Gac,Régis Fichot,Sophie Lanciano,Alain Delaunayet al. New Phytologist, 2021, 232 (1), pp.80-97. ⟨10.1111/nph.17555⟩ Article dans une revue hal-03292338v1
New insights into biomphalysin gene family diversification in the vector snail Biomphalaria glabrata Silvain Pinaud,Guillaume Tetreau,Pierre Poteaux,Richard Galinier,Cristian Chaparroet al. Frontiers in Immunology, 2021, 12, pp.635131. ⟨10.3389/fimmu.2021.635131⟩ Article dans une revue hal-03219003v1
A simple ATAC-seq protocol for population epigenetics Ronaldo de Carvalho Augusto,Olivier REY,Céline Cosseau,Cristian Chaparro,Jeremie Vidal-Dupiolet al. Wellcome Open Research, 2021, 5, pp.121. ⟨10.12688/wellcomeopenres.15552.2⟩ Article dans une revue hal-03145575v2
Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages Olivier REY,Eve Toulza,Jérôme Boissier,Cristian Chaparro,Jean-François Allienneet al. PLoS Pathogens, 2021, 17 (2), pp.e1009313. ⟨10.1371/journal.ppat.1009313⟩ Article dans une revue hal-03176500v1
Satellite-like W Elements: repetitive, transcribed, and putative mobile genetic factors with potential roles for biology and evolution of Schistosoma mansoni Maria Stitz,Cristian Chaparro,Zhigang Lu,V Janett Janett Olzog,Christina E Weinberget al. Genome Biology and Evolution, 2021, 13 (10), pp.evab204. ⟨10.1093/gbe/evab204⟩ Article dans une revue hal-03333536v1
Morphological and genomic characterisation of the Schistosoma hybrid infecting humans in Europe reveals admixture between Schistosoma haematobium and Schistosoma bovis Julien Kincaid-Smith,Alan Tracey,Ronaldo de Carvalho Augusto,Ingo Bulla,Nancy Holroydet al. PLoS Neglected Tropical Diseases, 2021, 15 (12), pp.e0010062. ⟨10.1371/journal.pntd.0010062⟩ Article dans une revue hal-03508340v2
Developmental Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation Thomas Dugé de Bernonville,Stéphane Maury,Alain Delaunay,Christian Daviaud,Cristian Chaparroet al. International Journal of Molecular Sciences, 2020, 21 (17), ⟨10.3390/ijms21176028⟩ Article dans une revue hal-02957413v1
A Sustained Immune Response Supports Long-Term Antiviral Immune Priming in the Pacific Oyster, Crassostrea gigas Maxime Lafont,Agnès Vergnes,Jeremie Vidal-Dupiol,Julien de Lorgeril,Yannick Guéguenet al. mBio, 2020, 11 (2), pp.e02777-19. ⟨10.1128/mBio.02777-19⟩ Article dans une revue hal-02527469v1
Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome Jean Delmotte,Cristian Chaparro,Richard Galinier,Julien de Lorgeril,Bruno Pettonet al. Frontiers in Microbiology, 2020, 11, pp.1579. ⟨10.3389/fmicb.2020.01579⟩ Article dans une revue hal-02915023v1
Sympatric versus allopatric evolutionary contexts shape differential immune response in Biomphalaria / Schistosoma interaction Anaïs Portet,Silvain Pinaud,Cristian Chaparro,Richard Galinier,Nolwenn M. Dheillyet al. PLoS Pathogens, 2019, 15 (3), pp.e1007647. ⟨10.1371/journal.ppat.1007647⟩ Article dans une revue hal-02076267v1
On the Importance to Acknowledge Transposable Elements in Epigenomic Analyses Emmanuelle Lerat,Josep Casacuberta,Cristian Chaparro,Cristina Vieira Genes, 2019, 10 (4), pp.258. ⟨10.3390/genes10040258⟩ Article dans une revue hal-02093613v1
Natural resistance to Fasciola hepatica (Trematoda) in Pseudosuccinea columella snails: A review from literature and insights from comparative “omic” analyses Annia Alba,Guillaume Tetreau,Cristian Chaparro,Jorge Sánchez,Antonio Vázquezet al. Developmental and Comparative Immunology, 2019, 101, pp.103463. ⟨10.1016/j.dci.2019.103463⟩ Article dans une revue hal-02279394v1
Species-specific mechanisms of cytotoxicity toward immune cells determine the successful outcome of Vibrio infections Tristan Rubio,Daniel Oyanedel,Yannick Labreuche,Eve Toulza,Xing Luoet al. Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (28), pp.14238-14247. ⟨10.1073/pnas.1905747116⟩ Article dans une revue hal-02163271v1
The phylogeny of the genus Indoplanorbis (Gastropoda, Planorbidae) from Africa and the French West Indies Gabriel Mouahid,Camille Clerissi,Jean-François Allienne,Cristian Chaparro,Salem Al Yafaeet al. Zoologica Scripta, 2018, 47 (5), pp.558-564. ⟨10.1111/zsc.12297⟩ Article dans une revue hal-01838840v1
Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters Julien de Lorgeril,Aude Lucasson,Bruno Petton,Eve Toulza,Caroline Montagnaniet al. Nature Communications, 2018, 9 (1), pp.4215. ⟨10.1038/s41467-018-06659-3⟩ Article dans une revue hal-01898110v1
Notos -a galaxy tool to analyze CpN observed expected ratios for inferring DNA methylation types Ingo Bulla,Benoît Aliaga,Virginia Lacal,Jan Bulla,Christoph Grunauet al. BMC Bioinformatics, 2018, 19, pp.105. ⟨10.1186/s12859-018-2115-4⟩ Article dans une revue hal-01746203v1
Histone methylation changes are required for life cycle progression in the human parasite Schistosoma mansoni David Roquis,Aaron Taudt,Kathrin P Geyer,Gilda Padalino,Karl F Hoffmannet al. PLoS Pathogens, 2018, 14 (5), pp.e1007066. ⟨10.1371/journal.ppat.1007066⟩ Article dans une revue hal-01808531v1
The anti-fecundity effect of 5-azacytidine (5-AzaC) on Schistosoma mansoni is linked to dis-regulated transcription, translation and stem cell activities Kathrin P Geyer,Sabrina P Munshi,Martin Vickers,Michael Squance,Toby Wilkinsonet al. International journal for parasitology. Drugs and drug resistance, 2018, 8 (2), pp.213 - 222. ⟨10.1016/j.ijpddr.2018.03.006⟩ Article dans une revue hal-01887430v1
Effects of a parental exposure to diuron on Pacific oyster spat methylome Rodolfo Rondon,Christoph Grunau,Manon Fallet,Nicolas Charlemagne,Rossana Sussarelluet al. Environmental Epigenetics, 2017, 3 (1), pp.dvx004. ⟨10.1093/eep/dvx004⟩ Article dans une revue hal-01511486v1
A multistrain approach to studying the mechanisms underlying compatibility in the interaction between Biomphalaria glabrata and Schistosoma mansoni Richard Galinier,Emmanuel Roger,Yves Moné,David Duval,Anaïs Portetet al. PLoS Neglected Tropical Diseases, 2017, 11 (3), pp.e0005398. ⟨10.1371/journal.pntd.0005398.s005⟩ Article dans une revue hal-01511153v1
Frequency and mitotic heritability of epimutations in Schistosoma mansoni David Roquis,Anne Rognon,Cristian Chaparro,Jérôme Boissier,Nathalie Arancibiaet al. Molecular Ecology, 2016, EPIGENETIC STUDIES IN ECOLOGY AND EVOLUTION, 25 (8), pp.1741-1758. ⟨10.1111/mec.13555⟩ Article dans une revue hal-01311089v1
Terminal-repeat Retrotransposons with GAG domain (TR-GAG) in plant genomes: A new testimony on the complex world of transposable elements Cristian Chaparro,Thomas Gayraud,Rogerio Fernandes de Souza,Douglas Silva Domingues,Sélastique Doffou Akaffouet al. Genome Biology and Evolution, 2015, 7 (2), pp.493-504. ⟨10.1093/gbe/evv001⟩ Article dans une revue hal-01162666v2
Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice Taciane Finatto,Antonio Costa de Oliveira,Cristian Chaparro,L.C. da Maia,D.R. Fariaset al. Rice, 2015, 8, pp.13. ⟨10.1186/s12284-015-0045-6⟩ Article dans une revue hal-01162622v1
XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress. Rémy Merret,Julie Descombin,Yu-Ting Juan,Jean-Jacques Favory,Marie-Christine Carpentieret al. Cell Reports, 2013, 5 (5), pp.1279-93. ⟨10.1016/j.celrep.2013.11.019⟩ Article dans une revue hal-01217835v1
Use of Next Generation Sequencing (NGS) Technologies for the Genome-Wide Detection of Transposition Moaine Elbaidouri,Cristian Chaparro,Olivier Panaud Methods in Molecular Biology, 2013, pp.265-274. ⟨10.1007/978-1-62703-568-2_19⟩ Article dans une revue hal-02102445v1
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Jonas Collén,Betina Porcel,Wilfrid Carré,Steven G Ball,Cristian Chaparroet al. Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩ Article dans une revue hal-01073830v1
Long-Range and Targeted Ectopic Recombination between the Two Homeologous Chromosomes 11 and 12 in Oryza Species J. Jacquemin,C. Chaparro,M. Laudie,Arjan Berger,Frédérick F. Gavoryet al. Molecular Biology and Evolution, 2011, 28 (11), pp.3139-3150. ⟨10.1093/molbev/msr144⟩ Article dans une revue hal-02114343v1
Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data Francois Sabot,Nathalie Picault,Moaine El-Baidouri,Christel Llauro,Cristian Chaparroet al. The Plant Journal, 2011, 66 (2), pp.241-246. ⟨10.1111/j.1365-313X.2011.04492.x⟩ Article dans une revue hal-02114338v1
Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis Thierry Pelissier,Marion Clavel,Cristian Chaparro,Marie-Noelle Pouch-Pelissier,Herve Vaucheretet al. RNA, 2011, 17 (8), pp.1502 - 1510. ⟨10.1261/rna.2680711⟩ Article dans une revue hal-01190246v1
The genome of Theobroma cacao. Xavier Argout,Jerome Salse,Jean-Marc Aury,Mark J Guiltinan,Gaetan Drocet al. Nature Genetics, 2011, 43 (2), pp.101-8. ⟨10.1038/ng.736⟩ Article dans une revue hal-00855922v1
Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices. Anne Roulin,Cristian Chaparro,Benoit Piegu,Scott Jackson,Olivier Panaud Genome Biology and Evolution, 2010, 2, pp.132-9. ⟨10.1093/gbe/evq005⟩ Article dans une revue hal-00787403v1
Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome. Regina S Baucom,James C Estill,Cristian Chaparro,Naadira Upshaw,Ansuya Jogiet al. PLoS Genetics, 2009, 5 (11), pp.e1000732. ⟨10.1371/journal.pgen.1000732⟩ Article dans une revue hal-00736178v1
Identification of an active LTR retrotransposon in rice. Nathalie Picault,Cristian Chaparro,Cristel Llauro,Benoit Piegu,Willfried Stengeret al. The Plant Journal, 2009, 58 (5), pp.754-65. ⟨10.1111/j.1365-313X.2009.03813.x⟩ Article dans une revue hal-00685656v1
Detailed analysis of a contiguous 22-Mb region of the maize genome. Fusheng Wei,Joshua C Stein,Chengzhi Liang,Jianwei Zhang,Robert S Fultonet al. PLoS Genetics, 2009, 5 (11), pp.e1000728. ⟨10.1371/journal.pgen.1000728⟩ Article dans une revue hal-00736698v1
The B73 maize genome: complexity, diversity, and dynamics. Patrick S Schnable,Doreen Ware,Robert S Fulton,Joshua C Stein,Fusheng Weiet al. Science, 2009, 326 (5956), pp.1112-5. ⟨10.1126/science.1178534⟩ Article dans une revue hal-00751527v1
The Rice Annotation Project Database (RAP-DB): 2008 update. Tsuyoshi Tanaka,Baltazar A Antonio,Shoshi Kikuchi,Takashi Matsumoto,Yoshiaki Nagamuraet al. Nucleic Acids Research, 2008, 36 (Database issue), pp.D1028-33. ⟨10.1093/nar/gkm978⟩ Article dans une revue hal-00300215v1
Spip and Squiq, two novel rice non-autonomous LTR retro-element families related to RIRE3 and RIRE8 Clémentine Vitte,Cristian Chaparro,Hadi H. Quesneville,Olivier Panaud Plant Science, 2007, 172 (1), pp.8-19. ⟨10.1016/j.plantsci.2006.07.008⟩ Article dans une revue istex hal-02114377v1
RetrOryza: a database of the rice LTR-retrotransposons. Cristian Chaparro,Romain Guyot,Andrea Zuccolo,Benoit Piegu,Olivier Panaud Nucleic Acids Research, 2007, 35 (Database issue), pp.D66-70. ⟨10.1093/nar/gkl780⟩ Article dans une revue hal-00164403v1

Communication dans un congrès (28)

Elucidating shedding time in Schistosoma mansoni through integrative omics analysis Cristian Chaparro Palestra Internactiçonal, Universidade Federale de Santa Catarina, Apr 2026, Florianopolis, Brazil Communication dans un congrès hal-05612651v1
Deciphering the molecular dialogue between the trematode parasite Schistosoma mansoni and its intermediate host snail Biomphalaria glabrata Sarah Dametto,David Duval,Benjamin Gourbal,Cristian Chaparro REID 2025 : Réseau Ecologie des Interactions Durables, Réseau Ecologie des Interactions Durables, May 2025, Lyon, France Communication dans un congrès hal-05090512v1
Exploring the diversity and evolution of a multigenic family of proteins involved in invertebrate immune response Cyril Guillemot,Richard Galinier,Jean-François Allienne,Anne Rognon,Cristian Chaparroet al. 8e rencontres Bioinformatiques, IFREMER, Sep 2025, Sète, France Communication dans un congrès hal-05307747v1
Unveiling the mysteries of mollusk epigenetics: a multiOmics approach to study the chromatin structure of the Pacific oyster Magallana gigas Amélie Dellong,Francesco Calzaferri,Jean-François Allienne,Juliette Pouzadoux,Alejandro Valdiviesoet al. EPIMAR 2025, May 2025, Barcelone, Spain Communication dans un congrès hal-05090427v1
Rendre MOFA accessible sous GALAXY Anaïs Bugnard,Cristian Chaparro Workshop Biologie des Systèmes/Intégration des données, UMR5244 IHPE, Jun 2024, Perpignan, France Communication dans un congrès hal-04893858v1
Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection Manon Fallet,C. Montagnani,Luc Dantan,Bruno Petton,Julien de Lorgerilet al. 6th International Symposium on Genomics in Aquaculture GIA 2022, May 2022, Grenade, Spain Communication dans un congrès hal-04886439v1
Temperature-induced masculinisation of Nile tilapia: effects seen in the adult gonad H. d'Cotta,R. Sissao,L. Rebordinos,Christoph Grunau,K. Belkhiret al. 14ht International Congress in the Biology of Fish, American Fisheries Society, Jun 2022, Montpellier, France Communication dans un congrès hal-03976732v1
Temperature-induced Masculinisation of Nile Tilapia: Effects seen in the Adult Gonad Helena d'Cotta,Rokyatou Sissao,Laureana Rebordinos,Christoph Grunau,Khalid Belkhiret al. International Congress on The Biology of Fish (ICBF), The American Fisheries Society; Centre of Marine Biodiversity Exploitation and Conservation, Jun 2022, Montpellier, France. 1 p Communication dans un congrès hal-05182866v1
Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection Manon Fallet,C. Montagnani,Luc Dantan,Bruno Petton,Julien de Lorgerilet al. Forum Labex TULIP, Labex TULIP, Nov 2022, Toulouse, France Communication dans un congrès hal-04886617v1
New insights into the role of DNA methylation in Biomphalaria glabrata infection susceptibility Nelia Luviano,Marie Lopez,Fleur Gawehns,Cristian Chaparro,Paola B Arimondoet al. XVI Symposium on Schistosomiasis, FIOCRUZ, Nov 2022, Ouro Preto, Brazil Communication dans un congrès hal-03963335v1
Genotype-by-temperature interaction in shaping the male phenotype of Nile Tilapia: Epigenetic a transcriptome responses in adult gonads Helena d'Cotta,Rokyatou Sissao,Laureana Rebordinos,Christoph Grunau,Khalid Belkhiret al. European Symposium on Sex Determination in Vertebrates (ESSDV), Oct 2022, Giens, France. 1 p Communication dans un congrès hal-05182868v1
Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection Manon Fallet,C. Montagnani,Luc Dantan,Bruno Petton,Julien de Lorgerilet al. MicrobiOccitanie 3e rencontre des laboratoires de microbiologie de la région Occitanie, Réseau des laboratoires de microbiologie de la région Occitanie, Jul 2022, Toulouse, France Communication dans un congrès hal-04886721v1
Are cercarial emergence rhythms of the diurnal and nocturnal chronotypes of the parasite Schistosoma mansoni circadian ? Chrystelle Lasica,Gabriel Mouahid,Chevalier F.,Winka Le Clec’h,Cristian Chaparroet al. 15th International Conference on Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases (MEEGID), Nov 2021, Online, United States Communication dans un congrès hal-03428124v1
Microbiota induced epigenetic memory shapes Crassostrea gigas for a lifelong and intergenerational immune protection Manon Fallet,C. Montagnani,Bruno Petton,Julien de Lorgeril,Sébastien Comarmondet al. Colloque GDR3E/REACTION Epigénétique en Ecologie, Evolution, Agronomie et Environnement, GDR3E : "Epigénétique en Ecologie et Evolution »; REacTION : "Réseau d'échange sur les mécanismes Épigénétiques, Oct 2021, Montpellier, France Communication dans un congrès hal-04888190v1
A Single Cell RNA sequencing approach to characterize Biomphalaria glabrata hemocyte responses in innate immune memory process Remi Pichon,Silvain Pinaud,Maud Laffitte,Cristian Chaparro,Emmanuel Vignalet al. 2021 International Congress on Invertebrate Pathology & Microbial Control + 53rd Annual Meeting of the SIP (Society for Invertebrate Pathology), Society for Invertebrate Pathology, Jun 2021, Online, France Communication dans un congrès hal-04888716v1
Epigenetic and metabolomic changes in hemocytes underlie innate immune memory in the vector snail Biomphalaria glabrata Remi Pichon,Silvain Pinaud,Manon Fallet,Celine Cosseau,Cristian Chaparroet al. 2021 International Congress on Invertebrate Pathology & Microbial Control + 53rd Annual Meeting of the SIP (Society for Invertebrate Pathology), Society for Invertebrate Pathology, Jun 2021, Online, France Communication dans un congrès hal-04888598v1
The WEome of Schistosoma mansoni – a non-coding DNA resource shaping schistosome biology, variability, and evolution? M. Stitz,Cristian Chaparro,Z Lu,Vj Olzog,Ce Weinberget al. BSP (British Society for Parasitology) Parasites online, British Society for Parasitology, Jun 2021, Online, France Communication dans un congrès hal-04888550v1
Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome Manon Fallet,Bruno Petton,Julien de Lorgeril,Sébastien Comarmond,Cristian Chaparroet al. REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France Communication dans un congrès hal-04890548v1
L’élimination des hémocytes détermine le succès parasitaire des Vibrio pathogènes de l’huitre Crassostrea gigas Tristan Rubio,Daniel Oyanedel Trigo,Yannick Labreuche,Eve Toulza,Xiaoliang Luoet al. REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France Communication dans un congrès hal-04890464v1
Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome Manon Fallet,Caroline Montagnani,Bruno Petton,Julien de Lorgeril,Cristian Chaparroet al. EPIMAR 2020 Epigenetics in Marine biology, May 2020, Online, France. 35 p Communication dans un congrès hal-04889202v1
Cracking the code of pacific oyster mortality syndrome Julien de Lorgeril,Aude Lucasson,Bruno Petton,Eve Toulza,C. Montagnaniet al. REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France Communication dans un congrès hal-04890593v1
Characterization of OSHV-1 µVAR genotypic diversity during pacific oyster mortality outbreaks in two French aquaculture areas Jean Delmotte,Richard Galinier,Julien de Lorgeril,Bruno Petton,Yannick Gueguenet al. 19th International Conference on Diseases of Fish and Shellfish EAFP Meeting, Sep 2019, Porto, Portugal Communication dans un congrès hal-04891711v1
Rôle de la diversité génétique de l’herpèsvirus OsHV-1 dans les mortalités de l’huître du Pacifique Jean Delmotte,Richard Galinier,Julien de Lorgeril,Guillaume Mitta,C. Montagnaniet al. 21e Journées Francophones de virologie, Société Française de Virologie, Mar 2019, Lyon, France Communication dans un congrès hal-04891687v1
How to strain your oyster? A story of immune shaping and priming in the pacific oyster, Crassostrea gigas C. Montagnani,Maxime Lafont,Bruno Petton,Julien de Lorgeril,Manon Falletet al. Aqua 2018 14th International Symposium on Aquaculture Nutrition, Aug 2018, Montpellier, France Communication dans un congrès hal-03965651v1
Cracking the code of Pacific oyster mortality syndrom Guillaume Mitta,Julien de Lorgeril,Aude Lucasson,Bruno Petton,Eve Toulzaet al. Aqua 2018 14th International Symposium on Aquaculture Nutrition, Aug 2018, Montpellier, France Communication dans un congrès hal-03965691v1
An integrative approach to decipher the summer mortality syndrome affecting Pacific oysters Julien de Lorgeril,Aude Lucasson,Bruno Petton,Eve Toulza,Philippe Haffneret al. Immuninv 2017, Jun 2017, Lyon, France Communication dans un congrès hal-03966171v1
An integrative approach to decipher the mortality syndrome affecting juvenile Pacific oysters Julien de Lorgeril,Aude Lucasson,Bruno Petton,Eve R Toulza,Philippe Haffneret al. International Conference on Holobionts, Apr 2017, Paris, France Communication dans un congrès hal-03965715v1
Recurrent bleaching inducing thermotolerance increases: a dive into the holobiont adaptability through (meta)genomic and epigenomic mechanisms Jeremie Vidal-Dupiol,Eve R Toulza,Christoph Grunau,Cristian Chaparro,David R Roquiset al. 13th International Coral Reef Symposium, Jun 2016, Honolulu, United States. pp.357 Communication dans un congrès hal-03965822v1

Poster de conférence (13)

Transcriptomic plasticity in schistosome worms after host shift and adaptive introgression can contribute to their zoonotic potential Nelia Luviano,Eglantine Mathieu-Bégné,Julien Kincaid-Smith,Olivier Rey,Marion A.L. Picardet al. Parasite evolution and impact in action: assessing the importance of hybrid schistosomes in Africa, Feb 2025, Londres, United Kingdom. Poster de conférence hal-04939728v1
Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian? Chrystelle Lasica,Gabriel Mouahid,Chevalier F.D.,Winka Le Clec’h,Cristian Chaparroet al. 86th Cold Spring Harbor Laboratory Symposium on Quantitative Biology: Biological Time Keeping, Jun 2021, Online, United States Poster de conférence hal-03428135v1
Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian ? Chrystelle Lasica,Gabriel Mouahid,Chevalier F.D.,Winka Le Clec’h,Cristian Chaparroet al. 18th Meeting of Ecology and Evolution of Infectious Diseases (EEID), Jun 2021, Montpellier, France Poster de conférence hal-03428131v1
Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian ? Chrystelle Lasica,Gabriel Mouahid,Frédéric D Chevalier,Winka Le Clec’h,Cristian Chaparroet al. 18th Ecology and Evolution of Infectious Diseases Meeting (EEID 2021), Jun 2021, Montpellier, France. Poster de conférence hal-04888027v1
Innate immune memory process in Biomphalaria glabrata snails: a comparative multi-omic approach to decipher the function and role-played by the hemocyte immune cells against S. mansoni infections Remi Pichon,Silvain Pinaud,Maud Laffitte,Cristian Chaparro,Emmanuel Vignalet al. 18th Ecology and Evolution of Infectious Diseases Meeting EEID2021, Jun 2021, Montpellier, France. Poster de conférence hal-04887929v1
Killing or Cheating: two strategies to colonize an oyster Daniel Oyanedel,Arnaud Lagorce,Maxime Bruto,Philippe Haffner,Marie-Agnes Traverset al. 18th Ecology and Evolution of Infectious Diseases Meeting EEID2021, Jun 2021, Montpellier, France. , 2021 Poster de conférence hal-04887973v1
No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: from mating interactions to differential gene expression Julien Kincaid-Smith,Eglantine Mathieu-Bégné,Cristian Chaparro,Marta Reguera-Gómez,Stephen Muleroet al. 13th European Multicolloquium of Parasitology EMOP2021, Oct 2021, Belgrade (on line), Serbia. Poster de conférence hal-04887795v1
Species-specific mechanisms of cytotoxicity toward immune cells determine the successful outcome of vibrio infections in oysters Tristan Rubio,Daniel Oyanedel,Yannick Labreuche,Eve Toulza,Xing Luoet al. Conférences Jaques Monod CJM3-2019 : Immunologie intégrative des insectes : contrôle des infections, Jun 2019, Roscoff, France. , 116, pp.14238 - 14247, 2019 Poster de conférence hal-04891592v1
Pseudosuccinea columella – Fasciola hepatica interaction: on the mechanistic and immunobiological bases of the snail host resistance/susceptibility to its parasitic trematode Annia Alba,J. Sanchez,Antonio Vazquez,David Duval,Cristian Chaparroet al. REID + Immuninv 2019, May 2019, Montpellier, France. Poster de conférence hal-04890610v1
Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome Manon Fallet,Bruno Petton,Julien de Lorgeril,Sébastien Comarmond,Cristian Chaparroet al. 5. Journée d'Animation Scientifique du réseau épiPhase, Jun 2019, Toulouse, France. 35 p., 2019, épiPHASE Poster de conférence hal-02736036v1
Clarifying the role of DNA methylation in tree phenotypic plasticity Mamadou Dia Sow,Anne-Laure Le Gac,Clément Lafon Placette,Alain Delaunay,Isabelle Le Janet al. 43. FEBS Congress, Biochemistry Forever, Jul 2018, Prague, Czech Republic. FEBS Open Bio, 8 (supplément S1), 2018, Supplément 43rd FEBS Congress, Biochemistry Forever, Prague, Czech Republic, July 7‐12, 2018 Poster de conférence hal-02736952v1
Epigenetic and genetic mechanisms of trained adaptation to global warming in corals Jeremie Vidal-Dupiol,Eve R Toulza,Christoph Grunau,Olivier Rey,David Roquiset al. EVOLUTION 2018 - 2nd Joint Congress on Evolutionary Biology, Aug 2018, Montellier, France. Poster de conférence hal-03969153v1
Drought-induced acclimation of DNA-hypomethylated poplars Anne-Laure Le Gac,Régis R. Fichot,Marie Mirouze,Vincent Segura,Alain Delaunayet al. IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. , 2016, IUFRO Genomics and Forest Tree Genetics. Abstract book Poster de conférence hal-02742078v1

Chapitre d'ouvrage (1)

Measuring histone modifications in the human parasite Schistosoma mansoni Ronaldo de Carvalho Augusto,David Roquis,Marion Picard,Cristian Chaparro,Celine Cosseauet al. David J. Timson. Schistosoma mansoni. Methods and Protocols, 2151, Springer, pp.93-107, 2020, Methods in Molecular Biology, 978-1-0716-0634-6. ⟨10.1007/978-1-0716-0635-3_9⟩ Chapitre d'ouvrage hal-03328481v1

Autre publication scientifique (1)

Mapping Histone post-translational modifications in the Pacific oyster using iDeal CUT&Tag and the Tissue Nuclei Extraction Module Amélie Dellong,Jean-François Allienne,Cristian Chaparro,Jeremie Vidal-Dupiol,Julie A. J. Clémentet al. 2025 Autre publication scientifique hal-05338975v1

Pré-publication, Document de travail (8)

The histone code of love: epigenetics of maturation of gonads in the human blood fluke Schistosoma mansoni Christoph Grunau,Zhigang Lu,Avril Coghlan,Max Moescheid,Thomas Quacket al. 2026 Pré-publication, Document de travail (preprint/prepublication) hal-05505724v1
Benchmarking of Chromatin Immunoprecipitation (ChIP-Seq) methods in the Pacific oyster Magallana gigas Amelie Dellong,Manon Fallet,Pierre-Louis Stenger,Cristian Chaparro,Jeremie Vidal-Dupiolet al. 2024 Pré-publication, Document de travail hal-04869413v1
Epigenetic variation causes heritable variation in complex traits in the mollusk Biomphalaria glabrata, vector of the human parasite Schistosoma mansoni Nelia Luviano,M. Lopez,Fleur Gawehns,Bart Haegeman,Pierick Mouginotet al. 2023 Pré-publication, Document de travail hal-04879747v1
Targeted insertion of reporter transgene into a gene safe harbor in human blood fluke, Schistosoma mansoni Wannaporn Ittiprasert Tanno,Max F Möscheid,Cristian Chaparro,Victoria H Mann,Thomas Quacket al. 2022 Pré-publication, Document de travail hal-03771118v1
Hypomethylated poplars show higher tolerance to water deficit and highlight a dual role for DNA methylation in shoot meristem: regulation of stress response and genome integrity M.D. D Sow,A-L Le Gac,Régis Fichot,S. Lanciano,A. Delaunayet al. 2021 Pré-publication, Document de travail hal-03239719v1
Sequencing, de novo assembly and annotation of the genome of the scleractinian coral, Pocillopora acuta Jeremie Vidal-Dupiol,Cristian Chaparro,Marine Pratlong,Pierre Pontarotti,Christoph Grunauet al. 2021 Pré-publication, Document de travail hal-03239739v1
Chromatin structure changes in Daphnia populations upon exposure to environmental cues – or – The discovery of Wolterecks “Matrix” Ronaldo de Carvalho Augusto,Aki Minoda,Olivier REY,Céline Cosseau,Cristian Chaparroet al. 2020 Pré-publication, Document de travail hal-02991174v1
Whole genome sequencing and morphological analysis of the human-infecting schistosome emerging in Europe reveals a complex admixture between Schistosoma haematobium and Schistosoma bovis parasites Julien Kincaid Smith,Alan Tracey,Ronaldo de Carvalho Augusto,Ingo Bulla,Nancy Holroydet al. 2018 Pré-publication, Document de travail hal-03134801v1