|
|
High-fidelity annotated triploid genome of the quarantine root-knot nematode, Meloidogyne enterolobii
Marine Poullet
,
Hemanth Konigopal
,
Corinne Rancurel
,
Marine Sallaberry
,
Celine Lopez-Roques
et al.
Article dans une revue
hal-04954634
v1
|
|
|
Orphan and de novo Genes in Fungi and Animals: Identification, Origins and Functions
Ercan Seçkin
,
Dominique Colinet
,
Edoardo Sarti
,
Etienne Danchin
Article dans une revue
hal-05455139
v1
|
|
|
Functional Carbohydrate-Active Enzymes Acquired by Horizontal Gene Transfer from Plants in the Whitefly <i>Bemisia tabaci</i>
Dominique Colinet
,
Mireille Haon
,
Elodie Drula
,
Mathilde Boyer
,
Sacha Grisel
et al.
Article dans une revue
hal-04968956
v1
|
|
|
Identification and characterization of specific motifs in effector proteins of plant parasites using MOnSTER
Giulia Calia
,
Paola Porracciolo
,
Yongpan Chen
,
Djampa Kozlowski
,
Hannes Schuler
et al.
Article dans une revue
hal-05282767
v1
|
|
|
In planta RNAi targeting Meloidogyne incognita Minc16803 gene perturbs nematode parasitism and reduces plant susceptibility
Valdeir Junio Vaz Moreira
,
Daniele Heloísa Pinheiro
,
Isabela Tristan Lourenço-Tessutti
,
Marcos Fernando Basso
,
Maria Lisei-De-Sa
et al.
Article dans une revue
hal-04615381
v1
|
|
|
Ionizing radiation responses appear incidental to desiccation responses in the bdelloid rotifer Adineta vaga
Victoria Moris
,
Lucie Bruneau
,
Jérémy Berthe
,
Anne-Catherine Heuskin
,
Sébastien Penninckx
et al.
Article dans une revue
hal-04627533
v1
|
|
|
Unzipped genome assemblies of polyploid root-knot nematodes reveal unusual and clade-specific telomeric repeats
Ana Paula Zotta Mota
,
Georgios Koutsovoulos
,
Laetitia Perfus-Barbeoch
,
Evelin Despot-Slade
,
Karine Labadie
et al.
Article dans une revue
hal-04489824
v1
|
|
|
Building integrated plant health surveillance: a proactive research agenda for anticipating and mitigating disease and pest emergence
S. Soubeyrand
,
Arnaud Estoup
,
Astrid Cruaud
,
Sylvie Malembic-Maher
,
Christine Meynard
et al.
Article dans une revue
(article de synthèse)
hal-04672656
v1
|
|
|
Mate copying requires the coincidence detector Rutabaga in the mushroom bodies of Drosophila melanogaster
Sabine Nöbel
,
Etienne Danchin
,
Guillaume Isabel
Article dans une revue
hal-04718788
v1
|
|
|
Genome sequence and annotation of Periconia digitata a hopeful biocontrol agent of phytopathogenic oomycetes
Elena Bovio
,
Corinne Rancurel
,
Aurélie Seassau
,
Marc Magliano
,
Marie Gislard
et al.
Article dans une revue
hal-04198172
v1
|
|
|
MHC-II distance between parents predicts sex allocation decisions in a genetically monogamous bird
Maxime Pineaux
,
Thomas Merkling
,
Etienne Danchin
,
Scott Hatch
,
Sarah Leclaire
et al.
Article dans une revue
hal-03770671
v1
|
|
|
Improvement of eukaryotic protein predictions from soil metagenomes
Carole Belliardo
,
Georgios D Koutsovoulos
,
Corinne Rancurel
,
Mathilde Clément
,
Justine Lipuma
et al.
Article dans une revue
(data paper)
hal-03931195
v1
|
|
|
The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5
Shahid Siddique
,
Zoran Radakovic
,
Clarissa Hiltl
,
Clement Pellegrin
,
Thomas Baum
et al.
Article dans une revue
hal-04169532
v1
|
|
|
AvP: A software package for automatic phylogenetic detection of candidate horizontal gene transfers
Georgios D Koutsovoulos
,
Solène Granjeon Noriot
,
Marc Bailly-Bechet
,
Etienne G J Danchin
,
Corinne Rancurel
Article dans une revue
hal-04080521
v1
|
|
|
Female fruit flies copy the acceptance, but not the rejection, of a mate
Sabine Noebel
,
Magdalena Assael-Monier
,
Laura Fargeot
,
Guillaume Lespagnol
,
Etienne Danchin
et al.
Article dans une revue
hal-03818761
v1
|
|
|
Chromatin landscape dynamics in the early development of the plant parasitic nematode Meloidogyne incognita
Rahim Hassanaly-Goulamhoussen
,
Ronaldo de Carvalho Augusto
,
Nathalie Marteu-Garello
,
Arthur Péré
,
Bruno Favery
et al.
Article dans une revue
hal-03467409
v2
|
|
|
Genome Expression Dynamics Reveal the Parasitism Regulatory Landscape of the Root-Knot Nematode Meloidogyne incognita and a Promoter Motif Associated with Effector Genes
Martine da Rocha
,
Caroline Bournaud
,
Julie Dazenière
,
Peter Thorpe
,
Marc Bailly-Bechet
et al.
Article dans une revue
hal-04617459
v1
|
|
|
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga
Paul Simion
,
Jitendra Narayan
,
Antoine Houtain
,
Alessandro Derzelle
,
Lyam Baudry
et al.
Article dans une revue
hal-03406292
v1
|
|
|
Dissecting protein domain variability in the core RNA interference machinery of five insect orders
Fabricio Barbosa Monteiro Arraes
,
Diogo Martins-De-Sa
,
Daniel Noriega Vasquez
,
Bruno Paes Melo
,
Muhammad Faheem
et al.
Article dans une revue
hal-05153710
v1
|
|
|
Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis
Paulo Vieira
,
Roxana Myers
,
Clement Pellegrin
,
Catherine Wram
,
Cedar Hesse
et al.
Article dans une revue
hal-05213942
v1
|
|
|
A simple ATAC-seq protocol for population epigenetics
Ronaldo de Carvalho Augusto
,
Olivier REY
,
Céline Cosseau
,
Cristian Chaparro
,
Jeremie Vidal-Dupiol
et al.
Article dans une revue
hal-03145575
v2
|
|
|
Recent Advances in Population Genomics of Plant-Parasitic Nematodes
Josselin Montarry
,
Benjamin Mimee
,
Etienne G J Danchin
,
Georgios D Koutsovoulos
,
Dave T Ste-Croix
et al.
Article dans une revue
(article de synthèse)
hal-03734053
v1
|
|
|
Movements of transposable elements contribute to the genomic plasticity and species diversification in an asexually reproducing nematode pest
Djampa Kozlowski
,
Rahim Hassanaly-Goulamhoussen
,
Martine da Rocha
,
Georgios Koutsovoulos
,
Marc Bailly-Bechet
et al.
Article dans une revue
hal-04617465
v1
|
|
|
Genome assembly and annotation of Meloidogyne enterolobii, an emerging parthenogenetic root- knot nematode
Georgios Koutsovoulos
,
Marine Poullet
,
Abdelnaser Elashry
,
Erika Sallet
,
Martine da Rocha
et al.
Article dans une revue
(data paper)
hal-02972492
v1
|
|
|
Characterization of raffinose metabolism genes uncovers a wild Arachis galactinol synthase conferring tolerance to abiotic stresses
Christina C Vinson
,
Christina C Vinson
,
Ana P Z Mota
,
Brenda N Porto
,
Thais N Oliveira
et al.
Article dans une revue
hal-03278098
v1
|
|
|
Population genomics supports clonal reproduction and multiple independent gains and losses of parasitic abilities in the most devastating nematode pest
Georgios Koutsovoulos
,
Eder Marques
,
Marie Jeanne Arguel
,
Laurent Duret
,
Andressa C. Z. Machado
et al.
Article dans une revue
hal-02444457
v1
|
|
|
Evolutionarily conserved plant genes responsive to root-knot nematodes identified by comparative genomics
Ana Paula Zotta Mota
,
Diana Fernandez
,
Fabricio Arraes
,
Anne-Sophie Petitot
,
Bruno Paes de Melo
et al.
Article dans une revue
hal-02991731
v1
|
|
|
Comparative Genomics Reveals Novel Target Genes towards Specific Control of Plant-Parasitic Nematodes
Priscila Grynberg
,
Roberto Coiti Togawa
,
Leticia Dias de Freitas
,
Jose Dijair Antonino
,
Corinne Rancurel
et al.
Article dans une revue
hal-03263736
v1
|
|
|
Genome sequence of the root-knot nematode Meloidogyne luci
Nik Susič
,
Georgios Koutsovoulos
,
Cristian Riccio
,
Etienne Danchin
,
Mark Blaxter
et al.
Article dans une revue
hal-05151184
v1
|
|
|
First evidence for a significant effect of the regression to the mean fallacy in mate copying: a comment on Davies et al
Etienne Danchin
,
Sabine Noebel
,
Arnaud Pocheville
,
Guillaume Isabel
Article dans une revue
hal-03156620
v1
|
|
|
Genome structure and content of the rice root‐knot nematode ( Meloidogyne graminicola )
Ngan Thi Phan
,
Julie Orjuela
,
Etienne Danchin
,
Christophe Klopp
,
Laetitia Perfus‐barbeoch
et al.
Article dans une revue
hal-02988764
v1
|
|
|
Gene copy number variations as signatures of adaptive evolution in the parthenogenetic, plant-parasitic nematode <em>Meloidogyne incognita</em>
Philippe Castagnone-Sereno
,
Karine Mulet
,
Etienne Danchin
,
Georgios D. Koutsovoulos
,
Mégane Karaulic
et al.
Article dans une revue
hal-02629335
v1
|
|
|
Signatures of the evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes
Philipp H. Schiffer
,
Etienne Danchin
,
Ann M. Burnell
,
Christopher J. Creevey
,
Simon Wong
et al.
Article dans une revue
hal-02444450
v1
|
|
|
Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis
Etienne Danchin
,
Arnaud Pocheville
,
Olivier REY
,
Benoit Pujol
,
Simon Blanchet
Article dans une revue
hal-03007472
v1
|
|
|
Cross-Kingdom analysis of diversity, evolutionary history, and site selection within the eukaryotic macrophage migration inhibitory factor superfamily
Claire Michelet
,
Etienne Danchin
,
Maëlle Jaouannet
,
Jürgen Bernhagen
,
Ralph Panstruga
et al.
Article dans une revue
hal-02361285
v1
|
|
|
Functional diversification of horizontally acquired glycoside hydrolase family 45 (GH45) proteins in phytophaga beetles
Andre Busch
,
Etienne Danchin
,
Yannick Pauchet
Article dans une revue
hal-02620256
v1
|
|
|
A Chemosensory GPCR as a Potential Target to Control the Root-Knot Nematode Meloidogyne incognita Parasitism in Plants
Emmanuel Bresso
,
Diana Fernandez
,
Deisy X Amora
,
Philippe Noel
,
Anne-Sophie Petitot
et al.
Article dans une revue
hal-02324816
v1
|
|
|
<em>Teratosphaeria</em> stem canker disease on Eucalypt in Italy
Salvatore Vitale
,
Laura Luongo
,
Etienne Danchin
,
Giovanni Mughini
,
Maria Gras
et al.
Article dans une revue
hal-02620419
v1
|
|
|
Response to Comment on “Cultural flies: Conformist social learning in fruitflies predicts long-lasting mate-choice traditions”
Arnaud Pocheville
,
Sabine Nöbel
,
Guillaume Isabel
,
Etienne Danchin
Article dans une revue
hal-03091131
v1
|
|
|
Epigenetics and insect polyphenism: mechanisms and climate change impacts
Gautier Richard
,
Gaël Le Trionnaire
,
Etienne Danchin
,
Arnaud Sentis
Article dans une revue
(article de synthèse)
hal-02457199
v1
|
|
|
Contrasting effects of wild <em>arachis</em> dehydrin under abiotic and biotic stresses
Ana Paula Zotta Mota
,
Thais Nicolini Oliveira
,
Christina Cleo Vinson
,
Thomas Christopher Rhys Williams
,
Marcos Mota Do Carmo Costa
et al.
Article dans une revue
hal-02622455
v1
|
|
|
Genome-wide expert annotation of the epigenetic machinery of the plant-parasitic nematodes <em>Meloidogyne</em> spp., with a focus on the asexually reproducing species
Loris Pratx
,
Corinne Rancurel
,
Martine da Rocha
,
Etienne Danchin
,
Philippe Castagnone-Sereno
et al.
Article dans une revue
hal-02626482
v1
|
|
|
Overwintering aggregations are part of Hippodamia undecimnotata’s (Coleoptera: Coccinellidae) mating system
Eline Catherine Susset
,
Jean‐louis Hemptinne
,
Etienne Danchin
,
Alexandra Magro
Article dans une revue
hal-02104347
v1
|
|
|
Comparative root transcriptome of wild <em>Arachis</em> reveals NBS-LRR genes related to nematode resistance
Ana Paula Zotta Mota
,
Bruna Vidigal
,
Etienne G.J Danchin
,
Roberto Coiti Togawa
,
Soraya C.M. Leal-Bertioli
et al.
Article dans une revue
hal-02622222
v1
|
|
|
Alienness: rapid detection of candidate horizontal gene transfers across the tree of life
Corinne Rancurel
,
Ludovic Legrand
,
Etienne Danchin
Article dans une revue
hal-01609604
v1
|
|
|
Genome-wide analysis of expansin superfamily in wild Arachis discloses a stress-responsive expansin-like B gene.
Larissa Arrais Guimaraes
,
Ana Paula Zotta Mota
,
Ana Claudia Guerra Araujo
,
Lucio Flavio de Alencar Figueiredo
,
Bruna Medeiros Pereira
et al.
Article dans une revue
hal-01605017
v1
|
|
|
Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes
Romain Blanc-Mathieu
,
Laetitia Zurletto
,
Jean-Marc Aury
,
Martine da Rocha
,
Jerome Gouzy
et al.
Article dans une revue
hal-01602779
v1
|
|
|
The transcriptomes of <em>Xiphinema index</em> and <em>Longidorus elongatus</em> Suggest Independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching nematodes
Etienne G J. Danchin
,
Laetitia Perfus-Barbeoch
,
Corinne Rancurel
,
Peter Thorpe
,
Martine da Rocha
et al.
Article dans une revue
hal-02624204
v1
|
|
|
Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.
Isabelle Damiani
,
Alice Drain
,
Marjorie Guichard
,
Sandrine Balzergue
,
Alexandre Boscari
et al.
Article dans une revue
hal-01354648
v1
|
|
|
Lateral gene transfer in eukaryotes: tip of the iceberg or of the ice cube?
Etienne G. J. Danchin
Article dans une revue
hal-01401096
v1
|
|
|
Horizontal gene transfer from bacteria has enabled the plant-parasitic nematode [i]Globodera pallida[/i] to feed on host-derived sucrose
Etienne G.J. Danchin
,
Elena A. Guzeeva
,
Sophie Mantelin
,
Adokiye Berepiki
,
John T. Jones
Article dans une revue
hal-01293531
v1
|
|
|
Prospects of herbivore egg-killing plant defenses for sustainable crop protection
Nina E. Fatouros
,
Antonino Cusumano
,
Etienne G.J. Danchin
,
Stefano Colazza
Article dans une revue
(article de synthèse)
hal-01413544
v1
|
|
|
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
Sebastian Eves-van Den Akker
,
Dominik R. Laetsch
,
Peter Thorpe
,
Catherine J. Lilley
,
Etienne G. J. Danchin
et al.
Article dans une revue
hal-01439090
v1
|
|
|
Horizontal gene transfer of pectinases from bacteria preceded the diversification of stick and leaf insects
Matan Shelomi
,
Etienne Danchin
,
David Heckel
,
Benjamin Wipfler
,
Sven Bradler
et al.
Article dans une revue
hal-01324361
v1
|
|
|
The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes
S Eves-van den Akker
,
C.J. Lilley
,
Etienne Danchin
,
Corinne Rancurel
,
P.J.A. Cock
et al.
Journal of Nematology, 2016, 48 (4), pp.317-317
Article dans une revue
hal-01495400
v1
|
|
|
The transcriptome of <em>Nacobbus aberrans</em> reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes
S Eves-van den Akker
,
C.J. Lilley
,
Etienne Danchin
,
Corinne Rancurel
,
P.J.A. Cock
et al.
Article dans une revue
hal-02638653
v1
|
|
|
Root-knot nematodes pan-genomics reveals novel target genes for safer and more specific control
Etienne Danchin
,
Marie Jeanne Arguel
,
Amandine Fournier
,
Laetitia Perfus-Barbeoch
,
Marc Magliano
et al.
Journal of Nematology, 2014, 46 (2), pp.150
Article dans une revue
hal-01269022
v1
|
|
|
Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment
Claire Veneault-Fourrey
,
Carine Commun
,
Annegret Kohler
,
Emmanuelle Morin
,
Raffaella Balestrini
et al.
Article dans une revue
hal-01123254
v1
|
|
|
Parasitic success without sex – the nematode experience
Philippe Castagnone-Sereno
,
Etienne Danchin
Article dans une revue
hal-02640000
v1
|
|
|
Top 10 plant-parasitic nematodes in molecular plant pathology
John T. Jones
,
Annelies Haegeman
,
Etienne Danchin
,
Hari S. Gaur
,
Johannes Helder
et al.
Article dans une revue
(article de synthèse)
hal-02651616
v1
|
|
|
Identification of novel target genes for safer and more specific control of root-knot nematodes from a pan-genome mining
Etienne Danchin
,
Marie Jeanne Arguel
,
Amandine Fournier
,
Laetitia Zurletto
,
Marc Magliano
et al.
Article dans une revue
hal-01137164
v1
|
|
|
Diversity and evolution of root-knot nematodes, genus Meloidogyne
Philippe Castagnone-Sereno
,
Etienne Danchin
,
Laetitia Perfus-Barbeoch
,
Pierre Abad
Article dans une revue
hal-02650089
v1
|
|
|
Signatures of adaptation to plant parasitism in nematode genomes
David Mck. Bird
,
John T. Jones
,
Charles H. Opperman
,
Taisei Kikuchi
,
Etienne Danchin
Article dans une revue
hal-01137177
v1
|
|
|
Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga
Jean-François Flot
,
Boris Hespeels
,
Xiang Li
,
Benjamin Noel
,
Irina Arkhipova
et al.
Article dans une revue
hal-01282538
v1
|
|
|
Lateral gene transfers have polished animal genomes: lessons from nematodes
Etienne Danchin
,
Marie-Noelle Rosso
Article dans une revue
hal-01267787
v1
|
|
|
Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants.
Maria Cecilia Arias
,
Etienne G J Danchin
,
Pedro Coutinho
,
Bernard Henrissat
,
Steven Ball
Article dans une revue
hal-00862309
v1
|
|
|
Contribution of lateral gene transfers to the genome composition and parasitic ability of root-knot nematodes.
Julien Paganini
,
Amandine Campan-Fournier
,
Martine da Rocha
,
Philippe Gouret
,
Pierre Pontarotti
et al.
Article dans une revue
hal-00831026
v1
|
|
|
Single pH buffer refolding screen for protein from inclusion bodies
Bruno Coutard
,
Etienne Danchin
,
Rachid Oubelaid
,
Bruno Canard
,
Christophe Bignon
Article dans une revue
istex
hal-02649344
v1
|
|
|
A root-knot nematode-secreted protein is injected into giant cells and targeted to the nuclei
Maëlle Jaouannet
,
Laetitia Perfus-Barbeoch
,
Emeline Deleury
,
Marc Magliano
,
Gilbert Engler
et al.
Article dans une revue
hal-02648827
v1
|
|
|
The plant apoplasm is an important recipient compartment for nematode secreted proteins
Paulo Vieira
,
Etienne Danchin
,
Cédric Neveu
,
Carine Crozat
,
Stéphanie Jaubert
et al.
Article dans une revue
hal-02644552
v1
|
|
|
What nematode genomes tell us about the importance of horizontal gene transfers in the evolutionary history of animals
Etienne Danchin
Mobile Genetic Elements, 2011, 1 (4), pp.1-5
Article dans une revue
hal-02641806
v1
|
|
|
Identification of plant-parasitism genes in nematodes in silico screening and in vivo validation in Meloidogyne incognita.
Mj. Arguel
,
Amandine Fournier
,
L. Perfus-Barbeoch
,
Eg. Danchin
,
Mn. Rosso
et al.
Communications in Agricultural and Applied Biological Sciences, 2011, 76 (3), pp.409-412
Article dans une revue
hal-02303156
v1
|
|
|
Data-mining of the Meloidogyne incognita degradome and comparative analysis of proteases in nematodes
Philippe Castagnone-Sereno
,
Emeline Deleury
,
Etienne Danchin
,
Laetitia Perfus-Barbeoch
,
Pierre Abad
Article dans une revue
hal-02644216
v1
|
|
|
Identifying discriminative classification-based motifs in biological sequences
Celine Vens
,
Marie-Noelle Rosso
,
Etienne Danchin
Article dans une revue
hal-02652585
v1
|
|
|
Horizontal gene transfer in nematodes: a catalyst for plant parasitism
Annelies Haegeman
,
John T. Jones
,
Etienne Danchin
Article dans une revue
hal-02652678
v1
|
|
|
An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease
Sophie Hok
,
Etienne Danchin
,
Valerie Allasia
,
Franck Panabières
,
Agnès Attard
et al.
Article dans une revue
hal-02650905
v1
|
|
|
Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea
Joelle J. Amselem
,
Christina A. Cuomo
,
Jan A. L. van Kan
,
Muriel Viaud
,
Ernesto P. Benito
et al.
Article dans une revue
hal-01190236
v1
|
|
|
A Medicago truncatula NADPH oxidase is involved in symbiotic nodule functioning
Daniel Marino
,
Emilie Andrio
,
Etienne Danchin
,
Elodie Oger
,
Sebastien Gucciardo
et al.
Article dans une revue
hal-02665315
v1
|
|
|
Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes
Etienne Danchin
,
Marie-Noelle Rosso
,
Paulo Vieira
,
Janice de Almeida-Engler
,
Pedro M Coutinho
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (41), pp.17651-17656
Article dans une revue
hal-02669078
v1
|
|
|
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
Li-Jun Ma
,
Charlotte van Der Does
,
Katherine A. Borkovich
,
Jeffrey J. Coleman
,
Marie-José Daboussi
et al.
Article dans une revue
hal-02662964
v1
|
|
|
Genome-wide survey and analysis of microsatellites in nematodes, with a focus on the plant-parasitic species Meloidogyne incognita
Philippe Castagnone-Sereno
,
Etienne Danchin
,
Emeline Deleury
,
Thomas Guillemaud
,
Thibaut Malausa
et al.
Article dans une revue
hal-02663550
v1
|
|
|
CASSIOPE: an expert system for conserved regions searches
Virginie Lopez Rascol
,
Anthony Levasseur
,
Olivier Chabrol
,
Simona Grusea
,
Philippe Gouret
et al.
BMC Bioinformatics, 2009, 10, pp.284
Article dans une revue
hal-02661323
v1
|
|
|
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion
Jeffrey J. Coleman
,
Steve D. Rounsley
,
Marianela Rodriguez-Carres
,
Alan Kuo
,
Catherine C. Wasmann
et al.
PLoS Genetics, 2009, 5 (8), pp.e1000618
Article dans une revue
hal-02664932
v1
|
|
|
The genomes of root-knot nematodes
David Mck Bird
,
Valerie M. Williamson
,
Pierre Abad
,
James Mccarter
,
Etienne Danchin
et al.
Article dans une revue
hal-02662834
v1
|
|
|
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
Pierre Abad
,
Jerome Gouzy
,
Jean-Marc Aury
,
Philippe Castagnone-Sereno
,
Etienne Danchin
et al.
Article dans une revue
hal-01189285
v1
|
|
|
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
F. Martin
,
A. Aerts
,
D. Ahrén
,
A. Brun
,
E. G. J. Danchin
et al.
Article dans une revue
halsde-00261893
v1
|
|
|
Evolution of major histocompatibility complex by "en bloc" duplication before mammalian radiation
Elodie Darbo
,
Etienne Danchin
,
Michael Mcdermott
,
Pierre Pontarotti
Article dans une revue
istex
hal-02664403
v1
|
|
|
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)
Diego Martínez
,
Randy Berka
,
Bernard Henrissat
,
Markku Saloheimo
,
Mikko Arvas
et al.
Article dans une revue
hal-02669177
v1
|
|
|
The genome sequence of the model ascomycete fungus Podospora anserina.
Eric Espagne
,
Olivier Lespinet
,
Fabienne Malagnac
,
Corinne da Silva
,
Olivier Jaillon
et al.
Article dans une revue
hal-00286300
v1
|
|
|
The use of evolutionary biology concepts for genome annotation
Etienne Danchin
,
Anthony Levasseur
,
Virginie Lopez Rascol
,
Philippe Gouret
,
Pierre Pontarotti
Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 2007, 308B (1), pp.26-36. ⟨10.1002/jez.b.21131⟩
Article dans une revue
istex
hal-02658043
v1
|
|
|
Conceptual bases for quantifying the role of the environment on gene evolution: the participation of positive selection and neutral evolution
Anthony Levasseur
,
Ludovic Orlando
,
Xavier Bailly
,
Michel C. Milinkovitch
,
Etienne Danchin
et al.
Article dans une revue
istex
hal-02668139
v1
|
|
|
Biotechnological applications and potential of fungal feruloyl esterases based on prevalence, classification and biochemical diversity
Isabelle Benoit
,
Etienne Danchin
,
Robert-Jan Bleichrodt
,
Ronald de Vries
Article dans une revue
istex
hal-02656772
v1
|
|
|
Where do animal alpha-amylases come from? An interkingdom trip.
J.-L. da Lage
,
E.G.J. Danchin
,
D. Casane
FEBS Letters, 2007, 581, pp.3927-3935
Article dans une revue
hal-00161062
v1
|
|
|
Where do animal alpha-amylases come from
Jean-Luc da Lage
,
Etienne Danchin
,
Didier Casane
Article dans une revue
hal-02663351
v1
|
|
|
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
Herman Pel
,
Johannes de Winde
,
David Archer
,
Paul Dyer
,
Gerald Hofmann
et al.
Article dans une revue
(article de synthèse)
hal-02668442
v1
|
|
|
Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins
Mark R. Stam
,
Etienne Danchin
,
Corinne Rancurel
,
Pedro M Coutinho
,
Bernard Henrissat
Article dans une revue
hal-02668771
v1
|
|
|
Eleven ancestral gene families lost in mammals and vertebrates while otherwise universally conserved in animals
Etienne Danchin
,
Philippe Gouret
,
Pierre Pontarotti
Article dans une revue
hal-02668451
v1
|
|
|
Des champignons qui carburent: de l'étude du génome à la production industrielle
Marcel M. Asther
,
Eric Record
,
Isabelle Gimbert
,
Jean-Claude Sigoillot
,
Anthony Levasseur
et al.
Biofutur, 2006, 269, pp.28-32
Article dans une revue
hal-02664475
v1
|
|
|
A rigorous method for multigenic families' functional annotation: the peptidyl arginine deiminase (PADs) proteins family example.
Nathalie Balandraud
,
Philippe Gouret
,
Etienne G. J. Danchin
,
M Blanc
,
D Zinn
et al.
Article dans une revue
inserm-00091307
v1
|
|
|
FIGENIX: intelligent automation of genomic annotation: expertise integration in a new software platform
Philippe Gouret
,
Vérane Vitiello
,
Nathalie Balandraud
,
André Gilles
,
Pierre Pontarotti
et al.
Article dans une revue
hal-02681213
v1
|
|
|
Statistical evidence for a more than 800-million-year-old evolutionarily conserved genomic region in our genome
Etienne Danchin
,
Pierre Pontarotti
Article dans une revue
istex
hal-02677409
v1
|
|
|
High similarity between flanking regions of different microsatellites detected within each of two species of Lepidoptera
Emese Meglécz
,
Frederic Petenian
,
Etienne Danchin
,
Armelle Coeur d'Acier
,
Jean-Yves Rasplus
et al.
Article dans une revue
istex
hal-02678374
v1
|
|
|
The major histocompatibility complex origin
Etienne Danchin
,
Vérane Vitiello
,
Alexandre Vienne
,
Olivier Richard
,
Philippe Gouret
et al.
Immunological Reviews, 2004, 198, pp.216-232
Article dans une revue
hal-02682552
v1
|
|
|
Towards the reconstruction of the bilaterian ancestral pre-MHC region
Etienne Danchin
,
Pierre Pontarotti
Article dans une revue
istex
hal-02677408
v1
|
|
|
Evolution of the proto-MHC ancestral region
Alexandre Vienne
,
Takashi Shiina
,
Laurent Abi-Rached
,
Etienne Danchin
,
Vérane Vitiello
et al.
Article dans une revue
istex
hal-02683166
v1
|
|
|
Conservation of the MHC-like region throughout evolution
Etienne Danchin
,
Laurent Abi-Rached
,
André Gilles
,
Pierre Pontarotti
Article dans une revue
istex
hal-02681710
v1
|