David Moreira Fernandez

97
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Publications

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Phylogenomic analyses indicate the archaeal superphylum DPANN originated from free-living euryarchaeal-like ancestors

Brittany Baker , Charley Mccarthy , Purificación López-García , Romain Leroy , Edward Susko et al.

Nature Microbiology, 2025, 10 (7), pp.1593-1604. ⟨10.1038/s41564-025-02024-5⟩

Article dans une revue hal-05391319v1
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A deeply branching lineage in Heterolobosea (Discoba) with multiflagellated and multigrooved life stages

Kristina Prokina , Naoji Yubuki , Luis Javier Galindo , Guifré Torruella , Yuji Inagaki et al.

Journal of Eukaryotic Microbiology, 2025, 72 (5), pp.e70037. ⟨10.1111/jeu.70037⟩

Article dans une revue hal-05391398v1
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Molecular Phylogeny of the SELMA Translocation Machinery Recounts the Evolution of Complex Photosynthetic Eukaryotes

Rafael Ponce-Toledo , David Moreira , Purificación López-García , Philippe Deschamps

Molecular Biology and Evolution, 2025, 42 (9), ⟨10.1093/molbev/msaf167⟩

Article dans une revue hal-05387665v1
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Phylogenomics of neglected flagellated protists supports a revised eukaryotic tree of life

Guifré Torruella , Luis Javier Galindo , David Moreira , Purificación López-García

Current Biology, 2025, 35 (1), pp.198-207.e4. ⟨10.1016/j.cub.2024.10.075⟩

Article dans une revue hal-05391348v1
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Discocelia plataet sp. n., a small Incertae Sedis cercozoan flagellate

Kristina Prokina , Guifré Torruella , Luis Javier Galindo , Omaya Dudin , Purificación López‐garcía et al.

Journal of Eukaryotic Microbiology, 2025, 72 (5), pp.e70041. ⟨10.1111/jeu.70041⟩

Article dans une revue hal-05391417v1
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A new member of the dynamin superfamily modulates mitochondrial membrane branching in Trypanosoma brucei.

Chloé Alexandra Morel , Corinne Asencio , David Moreira , Corinne Blancard , Bénédicte Salin et al.

Current Biology, In press, ⟨10.1016/j.cub.2025.02.033⟩

Article dans une revue hal-04995799v1
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Viruses and virus satellites of haloarchaea and their nanosized DPANN symbionts reveal intricate nested interactions

Yifan Zhou , Ana Gutiérrez-Preciado , Ying Liu , David Moreira , Michail M Yakimov et al.

Nature Microbiology, 2025, 10 (11), pp.2673-2685. ⟨10.1038/s41564-025-02149-7⟩

Article dans une revue pasteur-05342200v1
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Reconstructing the last common ancestor of all eukaryotes

Thomas A Richards , Laura Eme , John M Archibald , Guy Leonard , Susana M Coelho et al.

PLoS Biology, 2024, 22 (11), pp.e3002917. ⟨10.1371/journal.pbio.3002917⟩

Article dans une revue hal-05391266v1
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Global freshwater distribution of Telonemia protists

Roudaina Boukheloua , Indranil Mukherjee , Hongjae Park , Karel Šimek , Vojtěch Kasalický et al.

The International Society of Microbiologial Ecology Journal, 2024, 18 (1), ⟨10.1093/ismejo/wrae177⟩

Article dans une revue hal-04764737v1
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Extremely acidic proteomes and metabolic flexibility in bacteria and highly diversified archaea thriving in geothermal chaotropic brines

Ana Gutiérrez-Preciado , Bledina Dede , Brittany Baker , Laura Eme , David Moreira et al.

Nature Ecology & Evolution, 2024, 8 (10), pp.1856-1869. ⟨10.1038/s41559-024-02505-6⟩

Article dans une revue hal-04782858v1
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Exploring the prokaryote-eukaryote interplay in microbial mats from an Andean athalassohaline wetland

Carolina F Cubillos , Pablo Aguilar , David Moreira , Paola Bertolino , Miguel Iniesto et al.

Microbiology Spectrum, 2024, 12 (4), pp.00072-24. ⟨10.1128/spectrum.00072-24⟩

Article dans une revue hal-04782688v1
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Expanded phylogeny of extremely halophilic archaea shows multiple independent adaptations to hypersaline environments

Brittany Baker , Ana Gutiérrez-Preciado , Álvaro Rodríguez del Río , Charley Mccarthy , Purificación López-García et al.

Nature Microbiology, 2024, 9 (4), pp.964-975. ⟨10.1038/s41564-024-01647-4⟩

Article dans une revue hal-04782651v1
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Morphological and molecular characterization of a new member of the phylum Rhodelphidia

Kristina Prokina , Denis Tikhonenkov , Purificación López-García , David Moreira

Journal of Eukaryotic Microbiology, 2023, 71 (2), pp.e12995. ⟨10.1111/jeu.12995⟩

Article dans une revue hal-05391619v1
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Widespread formation of intracellular calcium carbonates by the bloom‐forming cyanobacterium Microcystis

Juliette Gaëtan , Sébastien Halary , Maxime Millet , Cécile Bernard , Charlotte Duval et al.

Environmental Microbiology, 2023, 25 (3), pp.751-765. ⟨10.1111/1462-2920.16322⟩

Article dans une revue hal-04069101v1

Morphological and molecular characterization of a new member of the phylum Rhodelphidia

Kristina Prokina , Denis Tikhonenkov , Purificación López-García , David Moreira

Journal of Eukaryotic Microbiology, 2023, ⟨10.1111/jeu.12995⟩

Article dans une revue hal-04384777v1
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Maturases and Group II Introns in the Mitochondrial Genomes of the Deepest Jakobid Branch

Luis Javier Galindo , Kristina Prokina , Guifré Torruella , Purificación López-García , David Moreira

Genome Biology and Evolution, 2023, 15 (4), ⟨10.1093/gbe/evad058⟩

Article dans une revue hal-04384792v1
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Morphological and molecular characterization of a new member of the phylum Rhodelphidia

Kristina I Prokina , Denis V Tikhonenkov , Purificación López‐garcía , David Moreira

Journal of Eukaryotic Microbiology, 2023, 71 (2), pp.e12995. ⟨10.1111/jeu.12995⟩

Article dans une revue hal-04800476v1
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Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida

Naoji Yubuki , Guifré Torruella , Luis Javier Galindo , Aaron A Heiss , Maria Cristina Ciobanu et al.

Journal of Eukaryotic Microbiology, 2023, 70 (6), pp.e12997. ⟨10.1111/jeu.12997⟩

Article dans une revue hal-04272301v1
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Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes

Fabian van Beveren , Laura Eme , Purificación López-García , Maria Ciobanu , David Moreira

Genome Biology and Evolution, 2022, 14 (4), ⟨10.1093/gbe/evac037⟩

Article dans une revue hal-03800403v1
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Expanding the molecular and morphological diversity of Apusomonadida, a deep‐branching group of gliding bacterivorous protists

Guifré Torruella , Luis Javier Galindo , David Moreira , Maria Ciobanu , Aaron Heiss et al.

Journal of Eukaryotic Microbiology, 2022, 70 (2), pp.e12956. ⟨10.1111/jeu.12956⟩

Article dans une revue hal-04384861v1
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Planktonic microbial communities from microbialite‐bearing lakes sampled along a salinity‐alkalinity gradient

Miguel Iniesto , David Moreira , Karim Benzerara , Guillaume Reboul , Paola Bertolino et al.

Limnology and Oceanography, 2022, ⟨10.1002/lno.12233⟩

Article dans une revue hal-03845854v1
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Phylogenomics Supports the Monophyly of Aphelids and Fungi and Identifies New Molecular Synapomorphies

Luis Javier Galindo , Guifré Torruella , Purificación López-García , Maria Ciobanu , Ana Gutiérrez-Preciado et al.

Systematic Biology, 2022, ⟨10.1093/sysbio/syac054⟩

Article dans une revue hal-04108762v1
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A New Gene Family Diagnostic for Intracellular Biomineralization of Amorphous Ca Carbonates by Cyanobacteria

Karim Benzerara , Elodie Duprat , Tristan Bitard-Feildel , Géraldine Caumes , Corinne Cassier-Chauvat et al.

Genome Biology and Evolution, 2022, 14 (3), pp.evac026. ⟨10.1093/gbe/evac026⟩

Article dans une revue hal-03616840v2
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A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

Xavier Grau-Bové , Cristina Navarrete , Cristina Chiva , Thomas Pribasnig , Meritxell Antó et al.

Nature Ecology & Evolution, 2022, 6, pp.1007-1023. ⟨10.1038/s41559-022-01771-6⟩

Article dans une revue hal-03847593v1
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Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known Alphaproteobacteria

Sergio A Muñoz-Gómez , Edward Susko , Kelsey Williamson , Laura Eme , Claudio H. Slamovits et al.

Nature Ecology & Evolution, 2022, 6, pp.253-262. ⟨10.1038/s41559-021-01638-2⟩

Article dans une revue hal-03847570v1
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Rapid formation of mature microbialites in Lake Alchichica, Mexico

Miguel Iniesto , David Moreira , Karim Benzerara , Elodie Muller , Paola Bertolino et al.

Environmental Microbiology Reports, 2021, 13 (5), pp.600-605. ⟨10.1111/1758-2229.12957⟩

Article dans une revue hal-03384295v1
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Archaeal overdominance close to life-limiting conditions in geothermally influenced hypersaline lakes at the Danakil Depression, Ethiopia

Jodie Belilla , Miguel Iniesto , David Moreira , Karim Benzerara , José María López‐garcía et al.

Environmental Microbiology, 2021, ⟨10.1111/1462-2920.15771⟩

Article dans une revue hal-03384106v1
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Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota

Luis Javier Galindo , Purificación López-García , Guifré Torruella , Sergey Karpov , David Moreira

Nature Communications, 2021, 12 (1), pp.4973. ⟨10.1038/s41467-021-25308-w⟩

Article dans une revue hal-03383509v1
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Small freshwater ecosystems with dissimilar microbial communities exhibit similar temporal patterns

Gwendoline David , Purificación López‐garcía , David Moreira , Benjamin Alric , Philippe Deschamps et al.

Molecular Ecology, 2021, 30 (9), pp.2162-2177. ⟨10.1111/mec.15864⟩

Article dans une revue hal-03327969v1
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Core microbial communities of lacustrine microbialites sampled along an alkalinity gradient

Miguel Iniesto , David Moreira , Guillaume Reboul , Philippe Deschamps , Karim Benzerara et al.

Environmental Microbiology, 2021, 23, pp.51-68. ⟨10.1111/1462-2920.15252⟩

Article dans une revue hal-02988545v1
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Physical connections: prokaryotes parasitizing their kin

Purificación López-García , David Moreira

Environmental Microbiology Reports, 2021, 13 (1), pp.54-61. ⟨10.1111/1758-2229.12910⟩

Article dans une revue hal-03043477v1
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Marine signature taxa and core microbial community stability along latitudinal and vertical gradients in sediments of the deepest freshwater lake

Guillaume Reboul , David Moreira , Nataliia V Annenkova , Paola Bertolino , Konstantin E Vershinin et al.

The International Society of Microbiologial Ecology Journal, 2021, 15, pp.3412-3417. ⟨10.1038/s41396-021-01011-y⟩

Article dans une revue hal-03384282v1
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Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake

Gwendoline M David , David Moreira , Guillaume Reboul , Nataliia V Annenkova , Luis J Galindo et al.

Environmental Microbiology, 2021, 23 (3), pp.1436-1451. ⟨10.1111/1462-2920.15346⟩

Article dans une revue hal-03043428v1
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Integrative analysis of the mineralogical and chemical composition of modern microbialites from ten Mexican lakes: What do we learn about their formation?

Nina Zeyen , Karim Benzerara , Olivier Beyssac , Damien Daval , Elodie Muller et al.

Geochimica et Cosmochimica Acta, 2021, 305, pp.148-184. ⟨10.1016/j.gca.2021.04.030⟩

Article dans une revue hal-03273216v1
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Reductive evolution and unique predatory mode in the CPR bacterium Vampirococcus lugosii

David Moreira , Yvan Zivanovic , Ana López-Archilla , Miguel Iniesto , Purificación López-García

Nature Communications, 2021, 12 (1), pp.2454. ⟨10.1038/s41467-021-22762-4⟩

Article dans une revue hal-03380222v1
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A novel microbialite-associated phototrophic Chloroflexi lineage exhibiting a quasi-clonal pattern along Depth

Aurélien Saghaï , Yvan Zivanovic , David Moreira , Rosaluz Tavera , Purificación López-García

Genome Biology and Evolution, 2020, 12 (7), pp.1207 - 1216. ⟨10.1093/gbe/evaa122⟩

Article dans une revue hal-03003320v1
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Performance of the melting seawater‐ice elution method on the metabarcoding characterization of benthic protist communities

Albert Reñé , Adrià Auladell , Guillaume Reboul , David Moreira , Purificación López-García

Environmental Microbiology Reports, 2020, 12 (3), pp.314-323. ⟨10.1111/1758-2229.12834⟩

Article dans une revue hal-02988536v1
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The Syntrophy hypothesis for the origin of eukaryotes revisited

Purificación López-García , David Moreira

Nature Microbiology, 2020, 5 (5), pp.655-667. ⟨10.1038/s41564-020-0710-4⟩

Article dans une revue hal-02988531v1
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Morphology and molecular phylogeny of Aphelidium insulamus sp. nov. (Aphelida, Opisthosporidia)

Sergey A. Karpov , Andrey Vishnyakov , Purificación López-García , Natalia Zorina , Maria Ciobanu et al.

Protistology, 2020, 14 (4), pp.191-203. ⟨10.21685/1680-0826-2020-14-4-3⟩

Article dans une revue hal-03043373v1
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Origin and Evolution of the Halo-Volcanic Complex of Dallol: Proto-Volcanism in Northern Afar (Ethiopia)

José López-García , David Moreira , Karim Benzerara , Olivier Grunewald , Purificación López-García

Frontiers in Earth Science, 2020, 7, ⟨10.3389/feart.2019.00351⟩

Article dans une revue hal-02988490v1
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Cultured Asgard Archaea Shed Light on Eukaryogenesis

Purificación López-García , David Moreira

Cell, 2020, 181 (2), pp.232-235. ⟨10.1016/j.cell.2020.03.058⟩

Article dans une revue hal-02988522v1

Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi

Luis Javier Galindo , Guifré Torruella , David Moreira , Yana Eglit , Alastair Simpson et al.

Philosophical Transactions of the Royal Society B: Biological Sciences, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩

Article dans une revue hal-03035936v1
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The Ultrastructure of Sanchytrium tribonematis (Sanchytriaceae, Fungi incertae sedis) Confirms its Close Relationship to Amoeboradix

Sergey Karpov , Andrey E Vishnyakov , David Moreira , Purificacion Lopez-Garcia

Journal of Eukaryotic Microbiology, 2019, ⟨10.1111/jeu.12740⟩

Article dans une revue hal-02365842v1
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Time series are critical to understand microbial plankton diversity and ecology

David Moreira , Purificacion Lopez-Garcia

Molecular Ecology, 2019, 28 (5), pp.920-922. ⟨10.1111/mec.15015⟩

Article dans une revue hal-02110406v1
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Hyperdiverse archaea near life limits at the polyextreme geothermal Dallol area

Jodie Belilla , David Moreira , Ludwig Jardillier , Guillaume Reboul , Karim Benzerara et al.

Nature Ecology & Evolution, 2019, 3 (11), pp.1552-1561. ⟨10.1038/s41559-019-1005-0⟩

Article dans une revue hal-02367946v1
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Fe-bearing phases in modern lacustrine microbialites from Mexico

Nina Zeyen , Karim Benzerara , Nicolas Menguy , Jessica Brest , Alexis Templeton et al.

Geochimica et Cosmochimica Acta, 2019, 253, pp.201-230. ⟨10.1016/j.gca.2019.03.021⟩

Article dans une revue hal-02124836v1
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Eukaryogenesis, a syntrophy affair

Purificación López-García , David Moreira

Nature Microbiology, 2019, 4 (7), pp.1068-1070. ⟨10.1038/s41564-019-0495-5⟩

Article dans une revue hal-02368063v1
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Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina - Blastocystis Stramenopile Lineage

Naoji Yubuki , Luis Xavier Galindo , Guillaume Reboul , Purificacion Lopez-Garcia , Matthew W Brown et al.

Molecular Biology and Evolution, 2019, 37, pp.651-659. ⟨10.1093/molbev/msz250⟩

Article dans une revue hal-02367918v1
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New member of Gromochytriales (Chytridiomycetes) - Apiochytrium granulosporum nov. gen. et sp

Sergey A Karpov , David Moreira , Maria A Mamkaeva , Olga V Popova , Vladimir V Aleoshine et al.

Journal of Eukaryotic Microbiology, 2019, 66 (4), pp.582-591. ⟨10.1111/jeu.12702⟩

Article dans une revue hal-02108862v1

Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi

Luis Javier Galindo , Guifré Torruella , David Moreira , Yana Eglit , Alastair Simpson et al.

Philosophical Transactions of the Royal Society B: Biological Sciences, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩

Article dans une revue hal-02988477v1
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Horizontal and endosymbiotic gene transfer in early plastid evolution

Rafael Isaac Ponce Toledo , Purificacion Lopez-Garcia , David Moreira

New Phytologist, 2019, ⟨10.1111/nph.15965⟩

Article dans une revue hal-02365884v1

Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi

Guifré Torruella , Xavier Grau-Bové , David Moreira , Sergey Karpov , John Burns et al.

Communications Biology, 2018, 1 (1), ⟨10.1038/s42003-018-0235-z⟩

Article dans une revue hal-02108878v1

The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage

Sergey Karpov , Purificacion Lopez-Garcia , Maria Mamkaeva , Vladimir Klimov , Andrey Vishnyakov et al.

Protist, 2018, 169 (1), pp.122-140. ⟨10.1016/j.protis.2017.11.002⟩

Article dans une revue hal-02109182v1
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Functional shifts in microbial mats recapitulate early Earth metabolic transitions

Ana Gutiérrez-Preciado , Aurélien Saghaï , David Moreira , Yvan Zivanovic , Philippe Deschamps et al.

Nature Ecology & Evolution, 2018, 2 (11), pp.1700-1708. ⟨10.1038/s41559-018-0683-3⟩

Article dans une revue hal-02996248v1
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Secondary Plastids of Euglenids and Chlorarachniophytes Function with a Mix of Genes of Red and Green Algal Ancestry

Rafael I Ponce-Toledo , David Moreira , Purificacion Lopez-Garcia , Philippe Deschamps

Molecular Biology and Evolution, 2018, 35 (9), pp.2198-2204. ⟨10.1093/molbev/msy121⟩

Article dans une revue hal-02108901v1
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Parvularia atlantis gen. et sp. nov., a Nucleariid Filose Amoeba (Holomycota, Opisthokonta)

David López-Escardó , Purificacion Lopez-Garcia , David Moreira , Iñaki Ruiz-Trillo , Guifré Torruella

Journal of Eukaryotic Microbiology, 2018, 65 (2), pp.170-179. ⟨10.1111/jeu.12450⟩

Article dans une revue hal-02109097v1

Evolutionary Genomics of Metchnikovella incurvata (Metchnikovellidae): An Early Branching Microsporidium

Luis Javier Galindo , Guifré Torruella , David Moreira , Hélène Timpano , Gita Paskerova et al.

Genome Biology and Evolution, 2018, 10 (10), pp.2736-2748. ⟨10.1093/gbe/evy205⟩

Article dans une revue hal-02109065v1
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Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania

Guillaume Reboul , David Moreira , Paola Bertolino , Alexandra Maria Hillebrand-Voiculescu , Purificación López-García

Environmental Microbiology Reports, 2018, 11 (3), pp.464-473. ⟨10.1111/1758-2229.12756⟩

Article dans une revue hal-02369191v1
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Cyanobacterial formation of intracellular Ca-carbonates in undersaturated solutions

Nithavong Cam , Karim Benzerara , Thomas Georgelin , Maguy Jaber , Jean-François Lambert et al.

Geobiology, 2018, 16 (1), pp.49-61. ⟨10.1111/gbi.12261⟩

Article dans une revue hal-01655173v1
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Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov.

David Moreira , Rosaluz Tavera , Karim Benzerara , Fériel Skouri-Panet , Estelle Couradeau et al.

International Journal of Systematic and Evolutionary Microbiology, 2017, 67 (3), pp.653-658. ⟨10.1099/ijsem.0.001679⟩

Article dans une revue hal-01741639v1
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Geochemical Conditions Allowing the Formation of Modern Lacustrine Microbialites

Nina Zeyen , Damien Daval , Purification Lopez-Garcia , David Moreira , Jerôme Gaillardet et al.

Procedia Earth and Planetary Science, 2017, 17, pp.380 - 383. ⟨10.1016/j.proeps.2016.12.096⟩

Article dans une revue hal-01440538v1
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An Early-Branching Freshwater Cyanobacterium at the Origin of Plastids

Rafael I Ponce-Toledo , Philippe Deschamps , Purificación López-García , Yvan Zivanovic , Karim Benzerara et al.

Current Biology, 2017, 27 (3), pp.386-391. ⟨10.1016/j.cub.2016.11.056⟩

Article dans une revue hal-01741643v1
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Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient

Aurélien Saghaï , Yvan Zivanovic , David Moreira , Karim Benzerara , Paola Bertolino et al.

Environmental Microbiology, 2016, 18 (12), pp.4990-5004. ⟨10.1111/1462-2920.13456⟩

Article dans une revue hal-01412335v1
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Involvement of microbial mats in early fossilization by decay delay and formation of impressions and replicas of vertebrates and invertebrates

Miguel Iniesto , Ángela D. Buscalioni , M. Carmen Guerrero , Karim Benzerara , David Moreira et al.

Scientific Reports, 2016, 6, pp.25716. ⟨10.1038/srep25716⟩

Article dans une revue hal-01319247v1
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Resilience of Freshwater Communities of Small Microbial Eukaryotes Undergoing Severe Drought Events

Marianne Simon , Purificación López-García , Philippe Deschamps , Gwendal Restoux , Paola Bertolino et al.

Frontiers in Microbiology, 2016, 7, pp.812. ⟨10.3389/fmicb.2016.00812⟩

Article dans une revue hal-01587905v1
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Biomineralization Patterns of Intracellular Carbonatogenesis in Cyanobacteria: Molecular Hypotheses

Jinhua Li , Isabel Margaret-Oliver , Nithavong Cam , Thomas Boudier , Marine Blondeau et al.

Minerals, 2016, 6 (1), pp.10. ⟨10.3390/min6010010⟩

Article dans une revue hal-01310553v1
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Marked seasonality and high spatial variability of protist communities in shallow freshwater systems

Marianne Simon , Purificación López-García , Philippe Deschamps , David Moreira , Gwendal Restoux et al.

The International Society of Microbiologial Ecology Journal, 2015, 9 (9), pp.1941-1953. ⟨10.1038/ISMEJ.2015.6⟩

Article dans une revue hal-03022559v1
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Metagenome-based diversity analyses suggest a significant contribution of non-cyanobacterial lineages to carbonate precipitation in modern microbialites

Aurélien Saghaï , Yvan Zivanovic , Nina Zeyen , David Moreira , Karim Benzerara et al.

Frontiers in Microbiology, 2015, 6, pp.797. ⟨10.3389/fmicb.2015.00797⟩

Article dans une revue hal-01221204v1
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Formation of low-T hydrated silicates in modern microbialites from Mexico and implications for microbial fossilization

Nina Zeyen , Karim Benzerara , Jinhua Li , Alexis Groleau , Etienne Balan et al.

Frontiers in Earth Science, 2015, 3, pp.64. ⟨10.3389/feart.2015.00064⟩

Article dans une revue hal-01226254v1

Bacterial gene import and mesophilic adaptation in archaea

Purificación López-García , Yvan Zivanovic , Philippe Deschamps , David Moreira

Nature Reviews Microbiology, 2015, 13 (7), pp.447 - 456. ⟨10.1038/nrmicro3485⟩

Article dans une revue hal-01438307v1
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Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems

Marianne Simon , Ludwig Jardillier , Philippe Deschamps , David Moreira , Gwendal Restoux et al.

Environmental Microbiology, 2015, 17 (10), pp.3610-3627. ⟨10.1111/1462-2920.12591⟩

Article dans une revue hal-03022575v1
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Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea

Charles Bachy , David Moreira , John R. Dolan , Purificación López-García

FEMS Microbiology Ecology, 2014, 87 (2), pp.330-342. ⟨10.1111/1574-6941.12224⟩

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Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria.

Karim Benzerara , Feriel Skouri-Panet , Jinhua Li , Céline Férard , Muriel Gugger et al.

Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (30), pp.10933-8. ⟨10.1073/pnas.1403510111⟩

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Molecular PhylogenyandUltrastructure of Aphelidium aff.melosirae (Aphelida, Opisthosporidia)

Sergey A. Karpov , Maria A. Mamkaeva , Karim Benzerara , David Moreira , Purificación López-García

Protist, 2014, 165, pp.512-526. ⟨10.1016/j.protis.2014.05.003⟩

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16S rDNA-based analysis reveals cosmopolitan occurrence but limited diversity of two cyanobacterial lineages with contrasted patterns of intracellular carbonate mineralization

Marie Ragon , Karim Benzerara , David Moreira , Rosaluz Tavera , Purificación López-García

Frontiers in Microbiology, 2014, 5, pp.331. ⟨10.3389/fmicb.2014.00331⟩

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Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study

Charles Bachy , John R. Dolan , Purificación López-García , Philippe Deschamps , David Moreira

The International Society of Microbiologial Ecology Journal, 2013, 7 (2), pp.244-255. ⟨10.1038/ismej.2012.106⟩

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Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae)

Fernando Gomez , Purificación López-García , John R. Dolan , David Moreira

Journal of Phycology, 2012, 47 (2), pp.95-104. ⟨10.1080/09670262.2012.662722⟩

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Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora)

Charles Bachy , Fernando Gomez , Purificación López-García , John R. Dolan , David Moreira

Protist, 2012, 163 (6), pp.873-887. ⟨10.1016/j.protis.2012.01.001⟩

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An Early-Branching Microbialite Cyanobacterium Forms Intracellular Carbonates

Estelle Couradeau , Karim Benzerara , Emmanuelle Gérard , David Moreira , Sylvain Bernard et al.

Science, 2012, 336, pp.459-462. ⟨10.1126/science.1216171⟩

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Prokaryotic and Eukaryotic Community Structure in Field and Cultured Microbialites from the Alkaline Lake Alchichica (Mexico)

Estelle Couradeau , Karim Benzerara , David Moreira , Emmanuelle Gerard , Jozef Kazmierczak et al.

PLoS ONE, 2012, 6 (12), pp.e28767. ⟨10.1371/journal.pone.0028767⟩

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Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

Achim Quaiser , Yvan Zivanovic , David Moreira , Purificación López-García

The International Society of Microbiologial Ecology Journal, 2011, 5 (2), pp.285-304. ⟨10.1038/ismej.2010.113⟩

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Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea.

Céline Brochier-Armanet , Philippe Deschamps , Purificación López-García , Yvan Zivanovic , Francisco Rodríguez-Valera et al.

The International Society of Microbiologial Ecology Journal, 2011, 5 (8), pp.1291-302. ⟨10.1038/ismej.2011.16⟩

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Sunlight-Exposed Biofilm Microbial Communities Are Naturally Resistant to Chernobyl Ionizing-Radiation Levels

Marie Ragon , Gwendal Restoux , David Moreira , Anders Pape Møller , Purificación López-García Article dans une revue hal-03021697v1

Molecular phylogeny of the dinoflagellates Podolampas and Blepharocysta (Peridiniales, Dinophyceae)

Fernando Gomez , David Moreira , Purificación López-García

Phycologia, 2010, 49 (3), pp.212-220. ⟨10.2216/PH09-29.1⟩

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Molecular Phylogeny of Noctilucoid Dinoflagellates (Noctilucales, Dinophyceae)

Fernando Gomez , David Moreira , Purificación López-García

Protist, 2010, 161 (3), pp.466-478. ⟨10.1016/j.protis.2009.12.005⟩

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A Complex Cell Division Machinery Was Present in the Last Common Ancestor of Eukaryotes

Laura Eme , David Moreira , Emmanuel Talla , Céline Brochier-Armanet

PLoS ONE, 2009, 4 (4), pp.e5021. ⟨10.1371/journal.pone.0005021⟩

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Metabolic Symbiosis and the Birth of the Plant Kingdom.

Philippe Deschamps , Christophe Colleoni , Yasunori Nakamura , Eiji Suzuki , Jean-Luc Putaux et al.

Molecular Biology and Evolution, 2007, 25 (3), epub ahead of print. ⟨10.1093/molbev/msm280⟩

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Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote

Hélène Moussard , David Moreira , Marie-Anne Cambon-Bonavita , Purificación López-García , Christian Jeanthon

FEMS Microbiology Ecology, 2006, 57 (3), pp.452-469. ⟨10.1111/j.1574-6941.2006.00128.x⟩

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Prebiotic Chemistry – Biochemistry – Emergence of Life (4.4–2 Ga)

Robert Pascal , Laurent Boiteau , Patrick Forterre , M. Gargaud , Antonio Lazcano et al.

Earth, Moon, and Planets, 2006, 98, pp.153-203. ⟨10.1007/s11038-006-9089-3⟩

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Thermophilic lifestyle for an uncultured archaeon from hydrothermal vents: evidence from environmental genomics

Hélène Moussard , Ghislaine Henneke , David Moreira , Vincent Jouffe , Purificación López-García et al.

Applied and Environmental Microbiology, 2006, 72 (3), pp.2268-2271. ⟨10.1128/AEM.72.3.2268-2271.2006⟩

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Microbial diversity on the Tatahouine meteorite

Karim Benzerara , Virginie Chapon , David Moreira , Purificación López-García , François Guyot et al.

Meteoritics and Planetary Science, 2006, 41 (8), pp.1249-1265. ⟨10.1111/j.1945-5100.2006.tb00519.x⟩

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Bacterial diversity and carbonate precipitation in the giant microbialites from the highly alkaline Lake Van, Turkey.

Purificación López-García , Józef Kazmierczak , Karim Benzerara , Stephan Kempe , François Guyot et al.

Extremophiles, 2005, 9, pp.263-274. ⟨10.1007/s00792-005-0457-0⟩

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Diversity of functional genes of methanogens, methanotrophs and sulfate reducers in deep‐sea hydrothermal environments

Olivier Nercessian , Nadège Bienvenu , David Moreira , Daniel Prieur , Christian Jeanthon

Environmental Microbiology, 2004, 7 (1), pp.118-132. ⟨10.1111/j.1462-2920.2004.00672.x⟩

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Eubacterial phylogeny based on translational apparatus proteins

Céline Brochier , Eric Bapteste , David Moreira , Hervé Philippe

Trends in Genetics, 2002, 18 (1), pp.1-5. ⟨10.1016/s0168-9525(01)02522-7⟩

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The new phylogeny of eukaryotes.

Heinui Philippe , Agnès Germot , David Moreira

Current Opinion in Genetics and Development, 2000, 10, pp.596-601

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Early branching or fast evolving eukaryotes? An answer based on slowly evolving positions.

Heinui Philippe , P. Lopez , H. Brinkmann , K. Budin , Agnès Germot et al.

Philosophical Transactions of the Royal Society B: Biological Sciences, 2000, 267, pp.1213-1221

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The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome

Céline Brochier , Hervé Philippe , David Moreira

Trends in Genetics, 2000, 16 (12), pp.529-533. ⟨10.1016/s0168-9525(00)02142-9⟩

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