Emiliano Ricci Chargé de Recherches (CRCN, Inserm)

Identifiants chercheurs

IdHAL :

emiliano-ricci

ORCID :

0000-0002-9789-5837

IdRef :

151546215

Publications

Article dans une revue (45)

Human MX1 orchestrates the cytoplasmic sequestration of neosynthesized influenza A virus vRNPs Joe Mckellar,Jimmy Cadènes,Francisco García de Gracia,Corentin Aubé,Ana Luiza Chaves Valadãoet al. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (41), pp.e2418935122. ⟨10.1073/pnas.2418935122⟩ Article dans une revue hal-05523515v1
Non-AUG HIV-1 uORF translation elicits specific T cell immune response and regulates viral transcript expression Emmanuel Labaronne,Didier Décimo,Lisa Bertrand,Laura Guiguettaz,Thibault Sohieret al. Nature Communications, 2025, 16 (1), pp.1706. ⟨10.1038/s41467-025-56772-3⟩ Article dans une revue hal-04958997v1
Unveiling conserved HIV-1 open reading frames encoding T cell antigens using ribosome profiling Lisa Bertrand,Annika Nelde,Bertha Cecilia Ramirez,Isabelle Hatin,Hugo Arbeset al. Nature Communications, 2025, 16 (1), pp.1707. ⟨10.1038/s41467-025-56773-2⟩ Article dans une revue hal-04958976v1
Metabolism-dependent secondary effect of anti-MAPK cancer therapy on DNA repair Fabien Aubé,Nicolas Fontrodona,Laura Guiguettaz,Elodie Vallin,Lucilla Fabbriet al. NAR Cancer, 2024, 6 (2), pp.e3002696. ⟨10.1093/narcan/zcae019⟩ Article dans une revue hal-04892007v1
SAMD9L acts as an antiviral factor against HIV-1 and primate lentiviruses by restricting viral and cellular translation Alexandre Legrand,Clara Dahoui,Clément de la Myre Mory,Kodie Noy,Laura Guiguettazet al. PLoS Biology, 2024, 22 (7), pp.e3002696. ⟨10.1371/journal.pbio.3002696⟩ Article dans une revue hal-04635756v1
Translation-dependent and -independent mRNA decay occur through mutually exclusive pathways defined by ribosome density during T cell activation Blandine Mercier,Emmanuel Labaronne,David Cluet,Laura Guiguettaz,Nicolas Fontrodonaet al. Genome Research, 2024, 34 (3), pp.394-409. ⟨10.1101/gr.277863.123⟩ Article dans une revue hal-04891852v1
Stable structures or PABP1 loading protects cellular and viral RNAs against ISG20-mediated decay Camille Louvat,Séverine Deymier,Xuan-Nhi Nguyen,Emmanuel Labaronne,Kodie Noyet al. Life Science Alliance, 2024, 7 (5), pp.e202302233. ⟨10.26508/lsa.202302233⟩ Article dans une revue hal-04609421v1
The inflammatory and tumor suppressor SAMD9L acts through a Schlafen-like box to restrict HIV and inhibit cell translation in SAAD/ATXPC Alexandre Legrand,Clara Dahoui,Clément de la Myre Mory,Clara Loyer,Kodie Noyet al. BioRxiv, 2023, 119 (35), ⟨10.1101/2023.01.19.524725⟩ Article dans une revue hal-04240383v1
RSL24D1 sustains steady-state ribosome biogenesis and pluripotency translational programs in embryonic stem cells Sébastien Durand,Marion Bruelle,Fleur Bourdelais,Bigitha Bennychen,Juliana Blin-Gonthieret al. Nature Communications, 2023, 14 (1), pp.356. ⟨10.1038/s41467-023-36037-7⟩ Article dans une revue hal-04010880v1
Severe COVID-19 patients have impaired plasmacytoid dendritic cell-mediated control of SARS-CoV-2 Manon Venet,Margarida Sa Ribeiro,Elodie Décembre,Alicia Bellomo,Garima Joshiet al. Nature Communications, 2023, 14 (1), pp.694. ⟨10.1038/s41467-023-36140-9⟩ Article dans une revue hal-04234855v1
Shaping the Innate Immune Response Through Post-Transcriptional Regulation of Gene Expression Mediated by RNA-Binding Proteins Anissa Guillemin,Anuj Kumar,Mélanie Wencker,Emiliano P Ricci Frontiers in Immunology, 2022, 12 (5), pp.e202302233. ⟨10.3389/fimmu.2021.796012⟩ Article dans une revue hal-04892057v1
The DEAD box RNA helicase DDX42 is an intrinsic inhibitor of positive‐strand RNA viruses Boris Bonaventure,Antoine Rebendenne,Ana Luiza Chaves Valadão,Mary Arnaud‐arnould,Ségolène Graciaset al. EMBO Reports, 2022, 23 (11), pp.e54061. ⟨10.15252/embr.202154061⟩ Article dans une revue hal-04807258v1
Ribosome dynamics and mRNA turnover, a complex relationship under constant cellular scrutiny Christelle Morris,David Cluet,Emiliano P Ricci Wiley Interdisciplinary Reviews-RNA, 2021, ⟨10.1002/wrna.1658⟩ Article dans une revue hal-03293983v1
Mutant Huntingtin stalls ribosomes and represses protein synthesis in a cellular model of Huntington disease Mehdi Eshraghi,Pabalu P Karunadharma,Juliana Blin,Neelam Shahani,Emiliano P. Ricciet al. Nature Communications, 2021, 12 (1), pp.1461. ⟨10.1038/s41467-021-21637-y⟩ Article dans une revue hal-04892103v1
Loop extrusion as a mechanism for formation of DNA damage repair foci Coline Arnould,Vincent Rocher,Anne-Laure Finoux,Thomas Clouaire,Kevin Liet al. Nature, 2021, 590 (7847), pp.660-665. ⟨10.1038/s41586-021-03193-z⟩ Article dans une revue hal-03385752v1
Baboon Envelope Pseudotyped “Nanoblades” Carrying Cas9/gRNA Complexes Allow Efficient Genome Editing in Human T, B, and CD34+ Cells and Knock-in of AAV6-Encoded Donor DNA in CD34+ Cells Alejandra Gutierrez-Guerrero,Maria Jimena Abrey Recalde,Philippe E Mangeot,Caroline Costa,Ornellie Bernadinet al. Frontiers in Genome Editing, 2021, 3, ⟨10.3389/fgeed.2021.604371⟩ Article dans une revue hal-04892116v1
Delivery of the Cas9/sgRNA Ribonucleoprotein Complex in Immortalized and Primary Cells via Virus-like Particles (&quot;Nanoblades&quot;) Philippe E Mangeot,Laura Guiguettaz,Thibault J M Sohier,Emiliano P Ricci Journal of visualized experiments : JoVE, 2021, 169, ⟨10.3791/62245⟩ Article dans une revue hal-04892096v1
Ribosomes guide pachytene piRNA formation on long intergenic piRNA precursors Yu H Sun,Jiang Zhu,Li Huitong Xie,Ziwei Li,Rajyalakshmi Meduriet al. Nature Cell Biology, 2021, 22 (2), pp.200 - 212. ⟨10.1038/s41556-019-0457-4⟩ Article dans une revue hal-04892140v1
Coupled protein synthesis and ribosome-guided piRNA processing on mRNAs Yu Sun,Ruoqiao Huiyi Wang,Khai Du,Jiang Zhu,Jihong Zhenget al. Nature Communications, 2021, 12 (1), pp.5970. ⟨10.1038/s41467-021-26233-8⟩ Article dans une revue hal-04892075v1
Loop extrusion as a mechanism for formation of DNA damage repair foci Coline Arnould,Vincent Rocher,Anne-Laure Finoux,Thomas Clouaire,Kevin Liet al. Nature, 2021, 590 (7847), pp.660-665. ⟨10.1038/s41586-021-03193-z⟩ Article dans une revue hal-04951649v1
The long non-coding RNA LUCAT1 is a negative feedback regulator of interferon responses in humans Shiuli Agarwal,Tim Vierbuchen,Sreya Ghosh,Jennie Chan,Zhaozhao Jianget al. Nature Communications, 2020, 11 (1), pp.6348. ⟨10.1038/s41467-020-20165-5⟩ Article dans une revue hal-04892129v1
The DEAD box RNA helicase DDX42 is an intrinsic inhibitor of positive-strand RNA viruses Boris Bonaventure,Antoine Rebendenne,Francisco Garcia de Gracia,Joe Mckellar,Ségolène Graciaset al. EMBO Reports, 2020, ⟨10.1101/2020.10.28.359356⟩ Article dans une revue (data paper) hal-05471251v1
Pseudomonas aeruginosa cleaves the decoding center of Caenorhabditis elegans ribosomes Alejandro Vasquez-Rifo,Emiliano P. Ricci,Victor Ambros PLoS Biology, 2020, 18 (12), pp.e3000969. ⟨10.1371/journal.pbio.3000969⟩ Article dans une revue hal-04892152v1
Senataxin homologue Sen1 is required for efficient termination of RNA polymerase III transcription Julieta Rivosecchi,Marc Larochelle,Camille Teste,Frédéric Grenier,Amélie Malapertet al. EMBO Journal, 2019, 38 (16), pp.e101955. ⟨10.15252/embj.2019101955⟩ Article dans une revue hal-02346967v1
Genome editing in primary cells and in vivo using viral-derived Nanoblades loaded with Cas9-sgRNA ribonucleoproteins Philippe Mangeot,Valérie Risson,Floriane Fusil,Aline Marnef,Emilie Laurentet al. Nature Communications, 2019, 10 (1), pp.45. ⟨10.1038/s41467-018-07845-z⟩ Article dans une revue hal-04951656v1
The long noncoding RNA CHROME regulates cholesterol homeostasis in primates Elizabeth J Hennessy,Coen van Solingen,Kaitlyn R Scacalossi,Mireille Ouimet,Milessa S Afonsoet al. Nature Metabolism, 2019, 1 (1), pp.98-110. ⟨10.1038/s42255-018-0004-9⟩ Article dans une revue hal-02444497v1
System-wide Profiling of RNA-Binding Proteins Uncovers Key Regulators of Virus Infection Manuel Garcia-Moreno,Marko Noerenberg,Shuai Ni,Aino Järvelin,Esther González-Almelaet al. Molecular Cell, 2019, 74 (1), pp.196-211.e11. ⟨10.1016/j.molcel.2019.01.017⟩ Article dans une revue hal-02444496v1
A cohesin/HUSH- and LINC-dependent pathway controls ribosomal DNA double-strand break repair Aline Marnef,Anne-Laure Finoux,Coline Arnould,Emmanuelle Guillou,Virginie Daburonet al. Genes and Development, 2019, 33 (17-18), pp.1175-1190. ⟨10.1101/gad.324012.119⟩ Article dans une revue hal-02352375v1
Staphylococcus aureus Small Colony Variants (SCVs): News From a Chronic Prosthetic Joint Infection Guilherme Loss,Patrícia Martins Simões,Florent Valour,Marina Farrel Cortês,Luiz Gonzagaet al. Frontiers in Cellular and Infection Microbiology, 2019, 9, pp.363. ⟨10.3389/fcimb.2019.00363⟩ Article dans une revue hal-02444492v1
Genome editing in primary cells and in vivo using viral-derived Nanoblades loaded with Cas9-sgRNA ribonucleoproteins Philippe Mangeot,Valérie Risson,Floriane Fusil,Aline Marnef,Emilie Laurentet al. Nature Communications, 2019, 10 (1), pp.45. ⟨10.1038/s41467-018-07845-z⟩ Article dans une revue hal-02351895v1
PDZ domain-binding motif of Tax sustains T-cell proliferation in HTLV-1-infected humanized mice Eléonore Pérès,Juliana Blin,Emiliano P. Ricci,Maria Artesi,Vincent Hahautet al. PLoS Pathogens, 2018, 14 (3), pp.e1006933. ⟨10.1371/journal.ppat.1006933⟩ Article dans une revue hal-01953695v1
When mRNA translation meets decay Alicia A. Bicknell,Emiliano P. Ricci Biochemical Society Transactions, 2017, 45 (2), pp.339-351. ⟨10.1042/BST20160243⟩ Article dans une revue hal-01909040v1
microRNAs stimulate translation initiation mediated by HCV-like IRESes Chloé Mengardi,Taran Limousin,Emiliano P. Ricci,Ricardo Soto-Rifo,Didier Decimoet al. Nucleic Acids Research, 2017, 45 (8), pp.4810-4824. ⟨10.1093/nar/gkw1345⟩ Article dans une revue hal-01911526v1
An intimate look at the viral replication cycle through ribosome profiling Juliana Blin,Emiliano P. Ricci Médecine/Sciences, 2016, 32 (10), pp.849-860. ⟨10.1051/medsci/20163210018⟩ Article dans une revue hal-01911479v1
A Long Noncoding RNA lincRNA-EPS Acts as a Transcriptional Brake to Restrain Inflammation Maninjay K Atianand,Wenqian Hu,Ansuman T Satpathy,Ying Shen,Emiliano Ricciet al. Cell, 2016, 165 (7), pp.1672-1685. ⟨10.1016/j.cell.2016.05.075⟩ Article dans une revue hal-02444498v1
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals Upasna Sharma,C. Conine,Jeremy M Shea,Ana A. Boskovic,Alan G Derret al. Science, 2016, 351 (6271), pp.391-396. ⟨10.1126/science.aad6780⟩ Article dans une revue hal-02444484v1
Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans Can Cenik,Elif Sarinay Cenik,Gun W. Byeon,Fabian Grubert,Sophie I. Candilleet al. Genome Research, 2015, 25 (11), pp.1610-1621. ⟨10.1101/gr.193342.115⟩ Article dans une revue hal-01911431v1
RIPiT-Seq: A high-throughput approach for footprinting RNA:protein complexes Guramrit Singh,Emiliano P Ricci,Melissa J Moore Methods, 2014, 65 (3), pp.320-332. ⟨10.1016/j.ymeth.2013.09.013⟩ Article dans une revue hal-02444505v1
HIV-2 genomic RNA accumulates in stress granules in the absence of active translation Ricardo Soto-Rifo,Fernando Valiente-Echeverria,Paulina S. Rubilar,Francisco Garcia-De-Gracia,Emiliano P. Ricciet al. Nucleic Acids Research, 2014, 42 (20), pp.12861-12875. ⟨10.1093/nar/gku1017⟩ Article dans une revue hal-01911354v1
Staufen1 senses overall transcript secondary structure to regulate translation Emiliano Ricci,Alper Kucukural,Can Cenik,Blandine C. Mercier,Guramrit Singhet al. Nature Structural and Molecular Biology, 2014, 21 (1), pp.26-35. ⟨10.1038/nsmb.2739⟩ Article dans une revue hal-02444503v1
A long noncoding RNA induced by TLRs mediates both activation and repression of immune response genes Susan Carpenter,Maninjay Atianand,Daniel Aiello,Emiliano Ricci,Pallavi Gandhiet al. Science, 2013, 341 (6147), pp.789-792. ⟨10.1126/science.1240925⟩ Article dans une revue hal-02444506v1
miRNA repression of translation in vitro takes place during 43S ribosomal scanning. Emiliano P Ricci,Taran Limousin,Ricardo Soto-Rifo,Paulina S Rubilar,Didier Decimoet al. Nucleic Acids Research, 2013, 41 (1), pp.586-98. ⟨10.1093/nar/gks1076⟩ Article dans une revue hal-00965621v1
Different effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation. Ricardo Soto-Rifo,Taran Limousin,Paulina S Rubilar,Emiliano P Ricci,Didier Décimoet al. Nucleic Acids Research, 2012, 40 (6), pp.2653-67. ⟨10.1093/nar/gkr1093⟩ Article dans une revue hal-00965639v1
The Andes hantavirus NSs protein is expressed from the viral small mRNA by a leaky scanning mechanism. Jorge Vera-Otarola,Loretto Solis,Ricardo Soto-Rifo,Emiliano P Ricci,Karla Pinoet al. Journal of Virology, 2012, 86 (4), pp.2176-87. ⟨10.1128/JVI.06223-11⟩ Article dans une revue hal-00965634v1
Translation of intronless RNAs is strongly stimulated by the Epstein–Barr virus mRNA export factor EB2 Emiliano Ricci,Fabrice Mure,Henri Gruffat,Didier Decimo,Cahora Medina-Palazonet al. Nucleic Acids Research, 2009, 37 (15), pp.4932 - 4943. ⟨10.1093/nar/gkp497⟩ Article dans une revue hal-01927972v1

Communication dans un congrès (3)

SNX-BAR proteins 5 and 6 are required for NCOA7-AS antiviral activity against influenza A virus Mary Arnaud-Arnould,Antoine Rebendenne,Marine Tauziet,S Urbach,Khadija El Koulaliet al. The 26th annual meeting of the Club Exocytose-Endocytose 2024, Sète, France, Apr 2024, Sète (Hérault), France Communication dans un congrès hal-05192437v1
SNX-BAR proteins 5 and 6 are required for NCOA7-AS antiviral activity against influenza A virus Mary Arnaud-Arnould,Antoine Rebendenne,Marine Tauziet,S Urbach,Khadija El Koulaliet al. Innasco Symposium, Jun 2024, Montpellier (France), France Communication dans un congrès hal-05192460v1
Rôle des protéines SNX-BAR 5 et 6 dans l’activité antivirale de NCOA7-AS contre le virus de la grippe A Mary Arnaud-Arnould,Antoine Rebendenne,Marine Tauziet,S Urbach,Khadija El Koulaliet al. XXVIes Journées francophones de virologie, Apr 2024, Bruxelles (Belgique), Belgium Communication dans un congrès hal-05192455v1

Poster de conférence (1)

SNX-BAR proteins 5 and 6 are required for NCOA7-AS antiviral activity against influenza A virus Mary Arnaud-Arnould,Antoine Rebendenne,Marine Tauziet,S Urbach,Khadija El Koulaliet al. Innasco Symposium, Jun 2025, Montpellier (France), France Poster de conférence hal-05192537v1

Brevet (1)

METHODS AND PRODUCTS FOR GENETIC ENGINEERING Ohlmann Théophile,Mangeot Philippe,Emiliano P Ricci France, Patent n° : US10968253B2. 2021 Brevet hal-04879446v1

Pré-publication, Document de travail (6)

SNX-BAR proteins 5 and 6 are required for NCOA7-AS antiviral activity against influenza A virus Mary Arnaud-Arnould,Antoine Rebendenne,Marine Tauziet,S Urbach,Khadija El Koulaliet al. 2025 Pré-publication, Document de travail hal-05168045v1
Stable Structures or poly(A)-binding protein loading protect cellular and viral RNAs against ISG20mediated decay Camille Louvat,Séverine Deymier,Xuan-Nhi Nguyen,Emmanuel Labaronne,Kodie Noyet al. 2023 Pré-publication, Document de travail hal-04284696v1
Unveiling novel conserved HIV-1 open reading frames encoding T cell antigens using ribosome profiling. Lisa Bertrand,Annika Nelde,Bertha Cecilia Ramirez,Isabelle Hatin,Hugo Arbeset al. 2024 Pré-publication, Document de travail hal-04790802v1
Extensive uORF translation from HIV-1 transcripts conditions DDX3 dependency for expression of main ORFs and elicits specific T cell immune responses in infected individuals Emmanuel Labaronne,Didier Décimo,Lisa Bertrand,Laura Guiguettaz,Thibault J.M. Sohieret al. 2022 Pré-publication, Document de travail hal-03855362v1
The DEAD box RNA helicase DDX42 is an intrinsic inhibitor of positive-strand RNA viruses Boris Bonaventure,Antoine Rebendenne,Francisco Garcia de Gracia,Joe Mckellar,Ségolène Graciaset al. 2021 Pré-publication, Document de travail hal-03448415v1
Loop extrusion as a mechanism for DNA Double-Strand Breaks repair foci formation Coline Arnould,Vincent Rocher,Thomas Clouaire,Pierre Caron,Philippe E Mangeotet al. 2020 Pré-publication, Document de travail hal-02991048v1

HDR (1)

Rôle des ribosomes et de la traduction dans la régulation post-transcriptionnelle de l'expression des gènes au cours de la réponse immunitaire Emiliano P. Ricci Cellular Biology. École Normale Supérieure de Lyon, 2020 HDR tel-04917624v1