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DynaRepo: the repository of macromolecular conformational dynamics
Omid Mokhtari
,
Emmanuelle Bignon
,
Hamed Khakzad
,
Yasaman Karami
Article dans une revue
hal-05404177v1
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Specific Binding Modes of the SIRT6 C-Terminal Domain to the Nucleosome Core Particle Influence DNA Unwrapping and H3K27 Accessibility
Yuya Qiu
,
Gabor Papai
,
Adam Ben Shem
,
Emmanuelle Bignon
Article dans une revue
hal-05368086v1
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Communication pathway analysis within protein-nucleic acid complexes
Sneha Bheemireddy
,
Roy González-Alemán
,
Emmanuelle Bignon
,
Yasaman Karami
Article dans une revue
hal-05041556v1
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Dynamical Resolution of QM/MM Near-UV Circular Dichroism Spectra of Low-Symmetry Systems
Jérémy Morere
,
Tanguy Leyder
,
Catherine Michaux
,
Claude Millot
,
Emmanuelle Bignon
et al.
Article dans une revue
hal-05216295v1
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Molecular Bases and Specificity behind the Activation of the Immune System OAS/RNAse L Pathway by Viral RNA
Emma Jung-Rodriguez
,
Florent Barbault
,
Emmanuelle Bignon
,
Antonio Monari
Article dans une revue
hal-04746925v1
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Binding to nucleosome poises human SIRT6 for histone H3 deacetylation
Ekaterina Smirnova
,
Emmanuelle Bignon
,
Patrick Schultz
,
Gabor Papai
,
Adam Ben Shem
Article dans une revue
hal-04487439v1
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Synthesis of Original Cyclic Dinucleotide Analogues Using the Sulfo-click Reaction
Romain Amador
,
Jean-Jacques Vasseur
,
Gabriel Birkuš
,
Emmanuelle Bignon
,
Antonio Monari
et al.
Article dans une revue
hal-04426596v1
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DNA damage and repair in the nucleosome: insights from computational methods
Natacha Gillet
,
Elise Dumont
,
Emmanuelle Bignon
Article dans une revue
hal-04743222v1
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Cysteine hyperoxidation rewires communication pathways in the nucleosome and destabilizes the dyad
Yasaman Karami
,
Emmanuelle Bignon
Article dans une revue
hal-04567034v1
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Understanding the interactions of Guanine‐Quadruplexes with peptides as novel strategies for diagnosis or tuning biological functions
Tom Miclot
,
Aurane Froux
,
Luisa d’Anna
,
Emmanuelle Bignon
,
Stéphanie Grandemange
et al.
Article dans une revue
hal-03925526v1
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Revealing the Molecular Interactions between Human ACE2 and the Receptor Binding Domain of the SARS-CoV-2 Wild-Type, Alpha and Delta Variants
Cécilia Hognon
,
Emmanuelle Bignon
,
Antonio Monari
,
Marco Marazzi
,
Cristina Garcia-Iriepa
Article dans une revue
hal-04150197v1
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Predicting the three-dimensional structure of the c-KIT proto-oncogene promoter and the dynamics of its strongly coupled guanine quadruplexes
Emmanuelle Bignon
,
Angelo Spinello
,
Tom Miclot
,
Luisa D’anna
,
Cosimo Ducani
et al.
Article dans une revue
hal-04258965v1
|
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Mechanism of the covalent inhibition of human transmembrane protease serine 2 as an original antiviral strategy
Angelo Spinello
,
Luisa D’anna
,
Emmanuelle Bignon
,
Tom Miclot
,
Stéphanie Grandemange
et al.
Article dans une revue
hal-04258941v1
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Resolving a guanine-quadruplex structure in the SARS-CoV-2 genome through circular dichroism and multiscale molecular modeling
Luisa d'Anna
,
Tom Miclot
,
Emmanuelle Bignon
,
Ugo Perricone
,
Giampaolo Barone
et al.
Article dans une revue
hal-04487444v1
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Molecular Basis of the pH-Controlled Maturation of the Tick-Borne Encephalitis Flavivirus
Emmanuelle Bignon
,
Elise Dumont
,
Antonio Monari
Article dans une revue
hal-04487441v1
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How SARS-CoV-2 alters the regulation of gene expression in infected cells
Emmanuelle Bignon
,
Stéphanie Grandemange
,
Elise Dumont
,
Antonio Monari
Article dans une revue
hal-04258968v1
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Robust AMBER Force Field Parameters for Glutathionylated Cysteines
Zineb Elftmaoui
,
Emmanuelle Bignon
Article dans une revue
hal-04487434v1
|
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Hijacking of Cellular Functions by Severe Acute Respiratory Syndrome Coronavirus-2. Permeabilization and Polarization of the Host Lipid Membrane by Viroporins
Emmanuelle Bignon
,
Marco Marazzi
,
Antonio Monari
Article dans une revue
hal-04487448v1
|
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G‐quadruplex recognition by DARPIns through epitope/paratope analogy
Tom Miclot
,
Emmanuelle Bignon
,
Alessio Terenzi
,
Stéphanie Grandemange
,
Giampaolo Barone
et al.
Article dans une revue
hal-03925664v1
|
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How Fragile We Are: Influence of Stimulator of Interferon Genes (STING) Variants on Pathogen Recognition and Immune Response Efficiency
Jeremy Morere
,
Cécilia Hognon
,
Tom Miclot
,
Tao Jiang
,
Elise Dumont
et al.
Article dans une revue
hal-04157319v1
|
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Specific Recognition of the 5′-Untranslated Region of West Nile Virus Genome by Human Innate Immune System
Emmanuelle Bignon
,
Marco Marazzi
,
Tom Miclot
,
Giampaolo Barone
,
Antonio Monari
Article dans une revue
hal-04487450v1
|
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Autophagy and evasion of the immune system by SARS-CoV-2. Structural features of the non-structural protein 6 from wild type and Omicron viral strains interacting with a model lipid bilayer
Emmanuelle Bignon
,
Marco Marazzi
,
Stéphanie Grandemange
,
Antonio Monari
Article dans une revue
hal-03925667v1
|
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Structure of the 5′ untranslated region in SARS-CoV-2 genome and its specific recognition by innate immune system via the human oligoadenylate synthase 1
Emmanuelle Bignon
,
Tom Miclot
,
Alessio Terenzi
,
Giampaolo Barone
,
Antonio Monari
Article dans une revue
hal-04487446v1
|
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Exploring Dihydroflavonol‐4‐Reductase Reactivity and Selectivity by QM/MM‐MD Simulations
Julien Diharce
,
Emmanuelle Bignon
,
Sébastien Fiorucci
,
Serge Antonczak
Article dans une revue
hal-03599132v1
|
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Never cared for what they do: High structural stability of Guanine-Quadruplexes in the presence of strand-break damage
Tom Miclot
,
Cécilia Hognon
,
Emmanuelle Bignon
,
Alessio Terenzi
,
Stéphanie Grandemange
et al.
Article dans une revue
hal-03925687v1
|
|
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Modeling the Enzymatic Mechanism of the SARS-CoV-2 RNA-Dependent RNA Polymerase by DFT/MM-MD: An Unusual Active Site Leading to High Replication Rates
Emmanuelle Bignon
,
Antonio Monari
Article dans une revue
hal-04487454v1
|
|
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Molecular Mechanisms Associated with Clustered Lesion-Induced Impairment of 8-oxoG Recognition by the Human Glycosylase OGG1
Tao Jiang
,
Antonio Monari
,
Elise Dumont
,
Emmanuelle Bignon
Article dans une revue
hal-03786798v1
|
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The iron maiden. Cytosolic aconitase/IRP1 conformational transition in the regulation of ferritin translation and iron hemostasis
Cécilia Hognon
,
Emmanuelle Bignon
,
Guillaume Harle
,
Nadège Touche
,
Stéphanie Grandemange
et al.
Article dans une revue
hal-03503702v1
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|
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Recent smell loss is the best predictor of COVID-19 among individuals with recent respiratory symptoms
Richard C. Gerkin
,
Kathrin Ohla
,
Maria G. Veldhuizen
,
Paule V. Joseph
,
Christine E. Kelly
et al.
Article dans une revue
hal-03367315v1
|
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Recognition of a tandem lesion by DNA bacterial formamidopyrimidine glycosylases explored combining molecular dynamics and machine learning
Emmanuelle Bignon
,
Natacha Gillet
,
Chen-Hui Chan
,
Tao Jiang
,
Antonio Monari
et al.
Article dans une revue
hal-03326585v1
|
|
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Structure and Dynamics of RNA Guanine Quadruplexes in SARS-CoV-2 Genome. Original Strategies against Emerging Viruses
Tom Miclot
,
Cécilia Hognon
,
Emmanuelle Bignon
,
Alessio Terenzi
,
Marco Marazzi
et al.
Article dans une revue
hal-03786805v1
|
|
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A Dynamic View of the Interaction of Histone Tails with Clustered Abasic Sites in a Nucleosome Core Particle
Emmanuelle Bignon
,
Natacha Gillet
,
Tao Jiang
,
Christophe Morell
,
Elise Dumont
Article dans une revue
hal-03279410v1
|
|
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Smell and taste changes are early indicators of the COVID-19 pandemic and political decision effectiveness
Denis Pierron
,
Veronica Pereda-Loth
,
Marylou Mantel
,
Maëlle Moranges
,
Emmanuelle Bignon
et al.
Article dans une revue
hal-02978603v2
|
|
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Nucleosomal embedding reshapes the dynamics of abasic sites
Emmanuelle Bignon
,
Victor Claerbout
,
Tao Jiang
,
Christophe Morell
,
Natacha Gillet
et al.
Article dans une revue
hal-03157466v1
|
|
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Impact of the Nucleosome Histone Core on the Structure and Dynamics of DNA-Containing Pyrimidine–Pyrimidone (6–4) Photoproduct
Eva Matoušková
,
Emmanuelle Bignon
,
Victor Claerbout
,
Tomáš Dršata
,
Natacha Gillet
et al.
Article dans une revue
hal-03157488v1
|
|
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Wetting the lock and key enthalpically favours polyelectrolyte binding
Emeric Jeamet
,
Jean Septavaux
,
Alexandre Héloin
,
Marion Donnier-Maréchal
,
Mélissa Dumartin
et al.
Article dans une revue
hal-01917669v1
|
|
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Ibuprofen and ketoprofen potentiate UVA-induced cell death by a photosensitization process
Emmanuelle Bignon
,
Marco Marazzi
,
Vanessa Besancenot
,
Hugo Gattuso
,
Guillaume Drouot
et al.
Article dans une revue
hal-01583391v1
|
|
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Interstrand cross-linking implies contrasting structural consequences for DNA: insights from molecular dynamics
Emmanuelle Bignon
,
Tomáš Dršata
,
Christophe Morell
,
Filip Lankaš
,
Elise Dumont
Article dans une revue
hal-01449663v1
|
|
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Molecular Dynamics Insights into Polyamine-DNA Binding Modes: Implications for Cross-Link Selectivity
Emmanuelle Bignon
,
Chen-Hui Chan
,
Christophe Morell
,
Antonio Monari
,
Jean-Luc Ravanat
et al.
Article dans une revue
hal-01646327v1
|
|
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Conformational polymorphism or structural invariance in DNA photoinduced lesions: implications for repair rates
François Dehez
,
Hugo Gattuso
,
Emmanuelle Bignon
,
Christophe Morell
,
Elise Dumont
et al.
Article dans une revue
hal-01518937v1
|
|
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Singlet Oxygen Attack on Guanine: Reactivity and Structural Signature within the B-DNA Helix
Elise Dumont
,
Raymond Grüber
,
Emmanuelle Bignon
,
Christophe Morell
,
Juan Aranda
et al.
Article dans une revue
istex
hal-01449792v1
|
|
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Correlation of bistranded clustered abasic DNA lesion processing with structural and dynamic DNA helix distortion
Emmanuelle Bignon
,
Hugo Gattuso
,
Christophe Morell
,
François Dehez
,
Alexandros G. Georgakilas
et al.
Article dans une revue
hal-01449647v1
|
|
|
Probing the reactivity of singlet oxygen with purines
Elise Dumont
,
Raymond Grüber
,
Emmanuelle Bignon
,
Christophe Morell
,
Yohann Moreau
et al.
Article dans une revue
hal-01271590v1
|
|
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Repair Rate of Clustered Abasic DNA Lesions by Human Endonuclease: Molecular Bases of Sequence Specificity
Hugo Gattuso
,
Elodie Durand
,
Emmanuelle Bignon
,
Christophe Morell
,
Alexandros G. Georgakilas
et al.
Article dans une revue
hal-01449702v1
|
|
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Insights into the chemical meanings of the reaction electronic flux
Christophe Morell
,
Vincent Tognetti
,
Emmanuelle Bignon
,
Elise Dumont
,
Noemi Hernandez-Haro
et al.
Article dans une revue
hal-01363815v1
|
|
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DNA Photosensitization by an "Insider": Photophysics and Triplet Energy Transfer of 5-Methyl-2-pyrimidone Deoxyribonucleoside
Emmanuelle Bignon
,
Hugo Gattuso
,
Christophe Morell
,
Elise Dumont
,
Antonio Monari
Article dans une revue
istex
hal-01186698v1
|