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Etienne Decencière

Etienne Decencière
77
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Web site
  • http://cmm.ensmp.fr/~decencie

Presentation

Directeur du centre de morphologie mathématique Mines Paris - Université PSL [<homepage>](http://cmm.ensmp.fr/~decencie "Homepage of E. Decencière")
Director of the Centre for Mathematical Morphology Mines Paris - PSL University [<homepage>](http://cmm.ensmp.fr/~decencie "Homepage of E. Decencière")

Publications

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A POSTERIORI DEEP LEARNING SEGMENTATION QUALITY ESTIMATION BASED ON PREDICTION ENTROPY

José Márcio Martins da Cruz , Mateus Sangalli , Santiago Velasco-Forero , Etienne Decencière , Thérese Baldeweck
Image Analysis & Stereology, 2023
Journal articles hal-04330303v1

Apprentissage profond pour les images tridimensionnelles

Petr Dokládal , Etienne Decencière
Le traitement du signal et ses applications, 2023, ⟨10.51257/a-v1-re186⟩
Journal articles hal-04312387v1

Deep learning identifies morphological patterns of homologous recombination deficiency in luminal breast cancers from whole slide images

Tristan Lazard , Guillaume Bataillon , Peter Naylor , Tatiana Popova , François-Clément Bidard
Cell Reports Medicine, 2022, 3 (12), pp.100872. ⟨10.1016/j.xcrm.2022.100872⟩
Journal articles hal-03936608v1
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APPLYING DEEP LEARNING TO MELANOCYTE COUNTING ON FLUORESCENT TRP1 LABELLED IMAGES OF IN VITRO SKIN MODEL

Tristan Lazard , Samy Blusseau , Santiago Velasco-Forero , Etienne Decencière , Virginie Flouret
Image Analysis & Stereology, 2022, 41 (3), pp.171-180. ⟨10.5566/ias.2640⟩
Journal articles hal-03838296v1

In vivo multiphoton multiparametric 3D quantification of human skin aging on forearm and face

Ana-Maria Pena , Thérèse Baldeweck , Etienne Decencière , Serge Koudoro , Steeve Victorin
Scientific Reports, 2022, 12, pp.14863. ⟨10.1038/s41598-022-18657-z⟩
Journal articles hal-03936588v1
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In vivo melanin 3D quantification and z-epidermal distribution by multiphoton FLIM, phasor and Pseudo-FLIM analyses

Ana-Maria Pena , Etienne Decencière , Sébastien Brizion , Peggy Sextius , Serge Koudoro
Scientific Reports, 2022, 12 (1), pp.1642. ⟨10.1038/s41598-021-03114-0⟩
Journal articles hal-04075282v1
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Artificial neural network approach for multiphase segmentation of battery electrode nano-CT images

Zeliang Su , Etienne Decencière , Tuan-Tu Nguyen , Kaoutar El-Amiry , Vincent de Andrade
npj Computational Materials, 2022, 8 (1), pp.30. ⟨10.1038/s41524-022-00709-7⟩
Journal articles hal-03595111v1
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A modular U-Net for automated segmentation of X-ray tomography images in composite materials

João P C Bertoldo , Etienne Decencière , David Ryckelynck , Henry Proudhon
Frontiers in Materials, 2021, 8, pp.761229. ⟨10.21203/rs.3.rs-721240/v1⟩
Journal articles hal-03380106v2
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In vivo multiphoton imaging for non‐invasive time course assessment of retinoids effects on human skin

Emmanuelle Tancrède‐bohin , Thérèse Baldeweck , Sébastien Brizion , Etienne Decencière , Steeve Victorin
Skin Research and Technology, 2020, 26 (6), pp.794-803. ⟨10.1111/srt.12877⟩
Journal articles hal-03026369v1
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Fast macula detection and application to retinal image quality assessment

Robin Alais , Petr Dokládal , Ali Erginay , Bruno Figliuzzi , Etienne Decencière
Biomedical Signal Processing and Control, 2020, 55, pp.101567. ⟨10.1016/j.bspc.2019.101567⟩
Journal articles hal-02428814v1
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Watervoxels

Pierre Cettour-Janet , Clément Cazorla , Vaïa Machairas , Quentin Delannoy , Nathalie Bednarek
Image Processing On Line, 2019, 9, pp.317-328. ⟨10.5201/ipol.2019.250⟩
Journal articles hal-02004228v2
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A 2.5d approach to skin wrinkles segmentation

Etienne Decencière , Amira Belhedi , Serge Koudoro , Frédéric Flament , Ghislain François
Image Analysis & Stereology, 2019, 38 (1), pp.75. ⟨10.5566/ias.1925⟩
Journal articles hal-02428880v1
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The Strong Gravitational Lens Finding Challenge

R. Benton Metcalf , M. Meneghetti , Camille Avestruz , Fabio Bellagamba , Clécio R. Bom
Astronomy and Astrophysics - A&A, 2019, 625, pp.A119. ⟨10.1051/0004-6361/201832797⟩
Journal articles hal-01737876v1

Direct multiphase mesh generation from 3D images using anisotropic mesh adaptation and a redistancing equation

Jia-Xin Zhao , Coupez Thierry , Etienne Decencière , Dominique Jeulin , David Cárdenas-Peña
Computer Methods in Applied Mechanics and Engineering, 2016, 309, pp.288-306
Journal articles hal-01421353v1
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Waterpixels

Vaïa Machairas , Matthieu Faessel , David Cárdenas-Peña , Théodore Chabardes , Thomas Walter
IEEE Transactions on Image Processing, 2015, 24 (11), pp.3707 - 3716. ⟨10.1109/TIP.2015.2451011⟩
Journal articles hal-01212760v1

Non-invasive short-term assessment of retinoids effects on human skin in vivo using multiphoton microscopy

Emmanuelle Tancrède-Bohin , Thérese Baldeweck , Etienne Decencière , Sébastien Brizion , S Victorin
Journal of the European Academy of Dermatology and Venereology, 2015, 29 (4), pp.673-681. ⟨10.1111/jdv.12650⟩
Journal articles hal-01273182v1
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Determination of collagen fiber orientation in histological slides using Mueller microscopy and validation by second harmonic generation imaging.

Stéphane Bancelin , André Nazac , Bicher Haj Ibrahim , Petr Dokládal , Etienne Decencière
Optics Express, 2014, 22 (19), pp.22561-22574. ⟨10.1364/OE.22.022561⟩
Journal articles hal-01081692v1
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Fibrillogenesis from nanosurfaces: multiphoton imaging and stereological analysis of collagen 3D self-assembly dynamics

Stéphane Bancelin , Etienne Decencière , Vaïa Machairas , Claire Albert , Thibaud Coradin
Soft Matter, 2014, pp.6651-6657. ⟨10.1039/c4sm00819g⟩
Journal articles hal-01082854v1
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Parsimonious Path Openings and Closings

Vincent Morard , Petr Dokládal , Etienne Decencière
IEEE Transactions on Image Processing, 2014, 23 (4), pp.1543 - 1555. ⟨10.1109/TIP.2014.2303647⟩
Journal articles hal-01082831v1
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FEEDBACK ON A PUBLICLY DISTRIBUTED IMAGE DATABASE: THE MESSIDOR DATABASE

Etienne Decencière , Xiwei Zhang , Guy Cazuguel , Bruno Laÿ , Béatrice Cochener
Image Analysis & Stereology, 2014, pp.231-234. ⟨10.5566/ias.1155⟩
Journal articles hal-01082570v1
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Exudate detection in color retinal images for mass screening of diabetic retinopathy

Xiwei Zhang , Guillaume Thibault , Etienne Decencière , Beatriz Marcotegui , Bruno Laÿ
Medical Image Analysis, 2014, 18 (7), pp.1026 - 1043. ⟨10.1016/j.media.2014.05.004⟩
Journal articles hal-01082809v1
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Segmentation of elongated objects using attribute profiles and area stability: application to melanocyte segmentation.

Andrés Serna , Beatriz Marcotegui , Etienne Decencière , Thérese Baldeweck , Ana-Maria Pena
Pattern Recognition Letters, 2014, 10.1016/j.patrec.2014.03.014
Journal articles hal-01101643v1
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Efficient geodesic attribute thinnings based on the barycentric diameter

Vincent Morard , Etienne Decencière , Petr Dokládal
Journal of Mathematical Imaging and Vision, 2013, 46 (1), pp.128-142. ⟨10.1007/s10851-012-0374-7⟩
Journal articles hal-00834415v1
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Automatic 3D segmentation of multiphoton images: a key step for the quantification of human skin

Etienne Decencière , Emmanuelle Tancrède-Bohin , Petr Dokládal , Serge Koudoro , Ana-Maria Pena
Skin Research and Technology, 2013, 19 (2), pp.115-124. ⟨10.1111/srt.12019⟩
Journal articles hal-00881692v1

TeleOphta: Machine learning and image processing methods for teleophthalmology

Etienne Decencière , Guy Cazuguel , Xiwei Zhang , Guillaume Thibault , Jean-Claude Klein
Innovation and Research in BioMedical engineering, 2013, 34 (2), pp.196-203
Journal articles hal-00881686v1
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One-Dimensional Openings, Granulometries and Component Trees in O(1) Per Pixel

Vincent Morard , Petr Dokládal , Etienne Decencière
IEEE Journal of Selected Topics in Signal Processing, 2012, 6 (7), pp.840-848. ⟨10.1109/JSTSP.2012.2201694⟩
Journal articles hal-00879627v1
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A Multiple-Instance Learning Framework for Diabetic Retinopathy Screening

Gwénolé Quellec , Mathieu Lamard , Michael D Abràmoff , Etienne Decencière , Bruno Lay
Medical Image Analysis, 2012, 16 (6), pp.1228-1240. ⟨10.1016/j.media.2012.06.003⟩
Journal articles hal-00786539v1

Objectivation des modifications cutanées cortico-induites en fonction de l'âge

A. M. Pena , T. Bladeweck , N. Parent , M. Carpentier-Chéraud , Etienne Decencière
Annales de Dermatologie et de Vénéréologie, 2012, 139 (12), pp.B74-75. ⟨10.1016/j.annder.2012.10.058⟩
Journal articles hal-00833797v1

Objectivation des modifications cutanées liées au vieillissement par une technique d'imagerie non invasive de la peau : la microscopie multiphoton in vivo

T. Bladeweck , A. M. Pena , Etienne Decencière , Emmanuelle Tancrède-Bohin
Annales de Dermatologie et de Vénéréologie, 2012, 139 (12), pp.B75. ⟨10.1016/j.annder.2012.10.059⟩
Journal articles hal-00833790v1

Imaging and 3D morphological analysis of collagen fibrils

Hellen Altendorf , Etienne Decencière , Dominique Jeulin , Paolo de Sa Peixoto , Ariane Deniset-Besseau
Journal of Microscopy, 2012, 247 (2), pp.161-175. ⟨10.1111/j.1365-2818.2012.03629.x⟩
Journal articles hal-00789405v1

Efficient Restoration Of Variable Area Soundtracks

Abdelâali Hassaïne , Etienne Decencière , Bernard Besserer
Image Analysis & Stereology, 2011, pp.113-119
Journal articles hal-00881672v1
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Region Merging Via Graph-Cuts

Jean Stawiaski , Etienne Decencière
Image Analysis & Stereology, 2008, 27 (1), pp.39-45. ⟨10.5566/ias.v27.p39-45⟩
Journal articles hal-00830726v1

Parametric Optimization Of Periodic Textured Surfaces For Friction Reduction In Combustion Engines

Costin Caciu , Etienne Decencière , Dominique Jeulin
Tribology Transactions, 2008, 51 (4), pp.533-541. ⟨10.1080/10402000802065337⟩
Journal articles hal-00830721v1

Numerical Analysis Of The Consequences Of Roughness Modifications In 3D Hydrodynamic Contacts

Costin Caciu , Etienne Decencière , Dominique Jeulin
Tribology Transactions, 2008, 51 (4), pp.483-493. ⟨10.1080/10402000802044340⟩
Journal articles hal-00830722v1
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Detection And Correction Of Under-/Overexposed Optical Soundtracks By Coupling Image And Audio Signal Processing

Jonathan Taquet , Bernard Besserer , Abdelâali Hassaïne , Etienne Decencière
EURASIP Journal on Advances in Signal Processing, 2008, 2008 (16), pp.281486. ⟨10.1155/2008/281486⟩
Journal articles hal-00830727v1
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Image filtering using morphological amoebas

Romain Lerallut, , Etienne Decencière , Fernand Meyer
Image and Vision Computing, 2007, 25 (4), pp.395-404. ⟨10.1016/j.imavis.2006.04.018⟩
Journal articles hal-01431825v1
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Spatial Reasoning Loss for Weakly Supervised Segmentation of Skin Histological Images

Mateus Sangalli , Santiago Velasco-Forero , José Márcio Martins da Cruz , Virginie Flouret , Charlène Gayrard
21st IEEE International Symposium on Biomedical Imaging, The IEEE Signal Processing Society and the IEEE Engineering in Medicine and Biology Society, May 2024, Athens, Greece
Conference papers hal-04485439v1
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Neural fields for sparse-view 3D X-ray imaging: preliminary work

Romain Vo , Julie Escoda , Caroline Vienne , Adrien Stolidi , Etienne Decencière
ORASIS 2023 - journées francophones des jeunes chercheurs en vision par ordinateur, Laboratoire LIS, UMR 7020, May 2023, Carqueiranne, France
Conference papers hal-04219565v1
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A Simple and Robust Framework for Cross-Modality Medical Image Segmentation applied to Vision Transformers

Matteo Bastico , David Ryckelynck , Laurent Corté , Yannick Tillier , Etienne Decencière
International Conference on Computer Vision Workshops (ICCVW) 2023, Oct 2023, Paris, France. pp.4128-4138, ⟨10.1109/ICCVW60793.2023.00446⟩
Conference papers hal-04309111v1

EVALUATION AND COMPARISON OF TWO DEEP-LEARNING STRATEGIES FOR ON-LINE X-RAY COMPUTED TOMOGRAPHY

Romain Vo , Julie Escoda , Caroline Vienne , Etienne Decencière
49th Annual Review of Progress in Quantitative Nondestructive Evaluation, Jul 2022, San diego (Californie), United States. ⟨10.1115/QNDE2022-98387⟩
Conference papers hal-03933448v1
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On power Jaccard losses for semantic segmentation

David Duque-Arias , Santiago Velasco-Forero , Jean-Emmanuel Deschaud , Francois Goulette , Andrés Serna
VISAPP 2021 : 16th International Conference on Computer Vision Theory and Applications, Feb 2021, Vienne (on line), Austria
Conference papers hal-03139997v1

Water-skel

Beatriz Marcotegui , Etienne Decencière , Albane Borocco
13th European Congress for Stereology and Image Analysis, 2021, Saint-Etienne, France
Conference papers hal-03536995v1
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A new color augmentation method for deep learning segmentation of histological images

Yang Xiao , Etienne Decencière , Santiago Velasco-Forero , Hélène Burdin , Thomas Bornschlögl
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI), Apr 2019, Venise, France
Conference papers hal-02167903v1

Cascaded multi-scale convolutional encoder-decoders for breast mass segmentation in high-resolution mammograms

Yutong Yan , Pierre-Henri Conze , Etienne Decencière , Mathieu Lamard , Gwenolé Quellec
IEEE International Engineering in Medicine and Biology Conference, Jul 2019, Berlin, Germany. ⟨10.1109/EMBC.2019.8857167⟩
Conference papers hal-02178409v1

RetinOpTIC-Automatic Evaluation of Diabetic Retinopathy

Bruno Laÿ , Ronan Danno , Gwenolé Quellec , Etienne Decencière , Ali Erginay
ARVO, 2019, Vancouver, Canada
Conference papers hal-02428873v1
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Segmenting junction regions without skeletonization using geodesic operators and the max-tree

Andrés Serna , Beatriz Marcotegui , Etienne Decencière
14th International Symposium on Mathematical Morphology and Its Applications to Signal and Image Processing, Jul 2019, Saarbrücken, Germany. ⟨10.1007/978-3-030-20867-7_35⟩
Conference papers hal-02430543v1
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Dealing with Topological Information within a Fully Convolutional Neural Network

Etienne Decencière , Santiago Velasco-Forero , Fu Min , Juanjuan Chen , Hélène Burdin
Advanced Concepts for Intelligent Vision Systems (ACIVS), Sep 2018, Poitiers, France
Conference papers hal-01877624v1
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Function Decomposition in Main and Lesser Peaks

Robin Alais , Petr Dokládal , Etienne Decencière , Bruno Figliuzzi
International Symposium on Mathematical Morphology, May 2017, Fontainebleau, France. ⟨10.1007/978-3-319-57240-6_26⟩
Conference papers hal-01432417v1
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Deep learning for studies of galaxy morphology

D Tuccillo , Marc Huertas-Company , Etienne Decencière , Santiago Velasco-Forero
IAU Symposium 325 on Astroinformatics, Oct 2016, Sorrente, Italy. pp.191 - 196, ⟨10.1017/S1743921317000552⟩
Conference papers hal-01535506v1
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NEW GENERAL FEATURES BASED ON SUPERPIXELS FOR IMAGE SEGMENTATION LEARNING

V Machairas , T Baldeweck , T Walter , Etienne Decencière
International Symposium on Biomedical Imaging, Apr 2016, Prague, Czech Republic
Conference papers hal-01276132v1

Comparison of different melanin detection methods based on time-resolved two-photon excited fluorescence

Thérese Baldeweck , Etienne Decencière , Serge Koudoro , Peggy Sextius , Ludwig Baux
Focus on Microscopy, Mar 2015, Göttingen, Germany
Conference papers hal-01139812v1

A 3d automatic segmentation method based on mathematical morphology for multiphoton images of melanocyte-keratinocyte coculture skin model

Etienne Decencière , Serge Koudoro , Sébastien Brizion , Ana-Maria Pena , Thérèse Baldeweck
Focus on Microscopy, Mar 2015, Göttingen, Germany
Conference papers hal-01139810v1

Spatial Repulsion Between Markers Improves Watershed Performance

Vaïa Machairas , Etienne Decencière , Thomas Walter
12th International Symposium, ISMM 2015, Reykjavik, Iceland, May 27-29, 2015, May 2015, Reykjavik, Iceland. pp.194-202, ⟨10.1007/978-3-319-18720-4_17⟩
Conference papers hal-01246692v1
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Waterpixels: Superpixels based on the watershed transformation

Vaïa Machairas , Etienne Decencière , Thomas Walter
IEEE International Conference On Image Processing, Oct 2014, Paris, France. ⟨10.1109/ICIP.2014.7025882⟩
Conference papers hal-01139797v1
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Second Harmonic Generation imaging of collagen fibrillogenesis

S Bancelin , Carole Aimé , Vaïa Machairas , Etienne Decencière , Claire Albert
Lasers and Electro-Optics Europe (CLEO EUROPE/IQEC), Jun 2013, Munich, Germany. pp.1 - 1, ⟨10.1109/CLEOE-IQEC.2013.6801528⟩
Conference papers hal-01082882v1
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Multimedia data mining for automatic diabetic retinopathy screening

Gwénolé Quellec , Mathieu Lamard , Béatrice Cochener , Etienne Decencière , Bruno Lay
Engineering in Medicine and Biology Society (EMBC), Jul 2013, Osaka, Japan. pp.7144 - 7147, ⟨10.1109/EMBC.2013.6611205⟩
Conference papers hal-01082869v1

Time-lapsed SHG imaging of collagen fibrillogenesis, correlation to electronic microscopy

Stéphane Bancelin , Carole Aimé , Vaïa Machairas , Etienne Decencière , Claire Albert
Focus on microscopy, 2013, Netherlands
Conference papers hal-00881670v1

Automatic segmentation of epidermal layers through in vivo skin multiphoton microscopy images

Petr Matula , Emmanuelle Tancrède-Bohin , Petr Dokládal , Serge Koudoro , Ana-Maria Pena
Focus on Microscopy, Mar 2013, Netherlands. pp.P2-E/08
Conference papers hal-00879646v1

3D Quantification of melanin in human skin in vivo based on multiphoton microscopy, image processing

Thérèse Baldeweck , Etienne Decencière , Sébastien Brizion , Serge Koudoro , Emmanuelle Tancrède-Bohin
Focus on microscopy, 2013, Netherlands
Conference papers hal-00881671v1

Imagerie multiphoton de la peau humaine in vivo

Thérèse Baldeweck , Emmanuelle Tancrède-Bohin , Petr Dokládal , Serge Koudoro , Vincent Morard
Optique et Diagnostic (OPTDIAG), May 2012, Paris, France
Conference papers hal-01251383v1

In vivo multiphoton microscopy associated to 3D image processing for human skin characterization

Thérèse Baldeweck , Emmanuelle Tancrède-Bohin , Petr Dokládal , Serge Koudoro , Vincent Morard
SPIE, Feb 2012, United States. ⟨10.1117/12.907410⟩
Conference papers hal-00879671v1

A General Framework For Detecting Diabetic Retinopathy Lesions In Eye Fundus Images

Gwénolé Quellec , Mathieu Lamard , Béatrice Cochener , Christian Roux , Guy Cazuguel
2012 25th International Symposium on Computer-Based Medical Systems (CBMS), Jun 2012, Rome, Italy. pp.1-6
Conference papers hal-00881663v1

Linear openings in arbitrary orientation in O(1) per pixel

Vincent Morard , Petr Dokládal , Etienne Decencière
36th IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2011, May 2011, Prague, Czech Republic. pp.Article number 5946767, Pages 1457-1460, ⟨10.1109/ICASSP.2011.5946767⟩
Conference papers hal-00658922v1

Geodesic attributes thinnings and thickenings

Vincent Morard , Etienne Decencière , Petr Dokládal
International Symposium on Mathematical morphology, 2011, Verbania-Intra, Italy
Conference papers hal-01251388v1

Geodesic attributes thinnings and thickenings

Vincent Morard , Etienne Decencière , Petr Dokládal
10th International Symposium on Mathematical Morphology and Its Application to Signal and Image Processing, ISMM 2011, Jul 2011, Verbania-Intra, Italy. pp.200-211, ⟨10.1007/978-3-642-21569-8_18⟩
Conference papers hal-00658960v1
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Application of the morphological ultimate opening to the detection of microaneurysms on eye fundus images from a clinical database

Xiwei Zhang , Guillaume Thibault , Etienne Decencière
13th International Congress of Stereology (ICS'13), Oct 2011, Pékin, China
Conference papers hal-00881666v1
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Region Growing Structuring Elements and New Operators Based on Their Shape

Vincent Morard , Etienne Decencière , Petr Dokládal
Signal and Image Processing (SIP 2011), Dec 2011, Dallas, United States. pp.Pattern recognition, track 759-018
Conference papers hal-00834502v1

Spatio-Temporal Segmentation For Radiotherapy Planning

Jean Stawiaski , Etienne Decencière , François Bidault
Progress in Industrial Mathematics at ECMI 2008, 2010, United Kingdom
Conference papers hal-00881675v1
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Restoration of variable density film soundtracks

Abdelâali Hassaïne , Etienne Decencière , Bernard Besserer
17th European Signal Processing Conference (EUSIPCO 2009), Aug 2009, Glasgow, United Kingdom. pp.2589-2593
Conference papers hal-00834503v1
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Interactive Liver Tumor Segmentation Using Graph-cuts and Watershed

Jean Stawiaski , Etienne Decencière , François Bidault
11th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2008), Sep 2008, New York, NY, United States
Conference papers hal-01445751v1

Restoration of Variable Area Soundtracks

E. Brun , Abdelâali Hassaïne , Bernard Besserer , Etienne Decencière
14th IEEE International Conference on Image Processing ICIP, Sep 2007, San Antonio, États-Unis. pp.13-16, ⟨10.1109/ICIP.2007.4379944⟩
Conference papers hal-00361070v1

Friction analysis in laser textured surface lubricated contacts

Christophe Vincent , Costin Caciu , Guy Monteil , Etienne Decencière , Dominique Jeulin
STLE Annual Meeting, May 2007, Philadelphia, United States. CD-ROM pp. 1-4
Conference papers hal-00331525v1
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Image Filtering Using Morphological Amoebas

Romain Lerallut , Etienne Decencière , Fernand Meyer
7th international symposium on mathematical morphology, 2005, Paris, France. ⟨10.1007/1-4020-3443-1_2⟩
Conference papers hal-01140310v1
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Multiphoton FLIM in cosmetic clinical research

Ana-Maria Pena , Etienne Decencière , Sébastien Brizion , Steeve Victorin , Serge Koudoro
Multiphoton Microscopy and Fluorescence Lifetime Imaging: Applications in Biology and Medicine, 2018, ⟨10.1515/9783110429985-021⟩
Book sections hal-01808983v1