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Metallo-Beta-Lactamase-like Encoding Genes in Candidate Phyla Radiation: Widespread and Highly Divergent Proteins with Potential Multifunctionality
Mohamad Maatouk
,
Vicky Merhej
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Pierre Pontarotti
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Ahmad Ibrahim
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Jean-Marc Rolain
Journal articles
hal-04275003v1
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Using Genomics to Decipher the Enigmatic Properties and Survival Adaptation of Candidate Phyla Radiation
Mohamad Maatouk
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Jean-Marc Rolain
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Fadi Bittar
Journal articles
hal-04155452v1
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Candidate Phyla Radiation, an Underappreciated Division of the Human Microbiome, and Its Impact on Health and Disease
Sabrina Naud
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Ahmad Ibrahim
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Camille Valles
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Mohamad Maatouk
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Fadi Bittar
Journal articles
hal-03754522v1
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Reverse Genomics: Design of Universal Epitope Sets to Isolate All Saccharibacteria Members from the Human Oral Cavity
Ahmad Ibrahim
,
Mohamad Maatouk
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Didier Raoult
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Fadi Bittar
Journal articles
hal-03663844v1
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New Beta-lactamases in Candidate Phyla Radiation: Owning Pleiotropic Enzymes Is a Smart Paradigm for Microorganisms with a Reduced Genome
Mohamad Maatouk
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Ahmad Ibrahim
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Lucile Pinault
,
Nicholas Armstrong
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Said Azza
Journal articles
hal-03754479v1
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Emergence of Candida auris in intensive care units in Algeria
Hanane Zerrouki
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Ahmad Ibrahim
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Sid‐ahmed Rebiahi
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Yamina Elhabiri
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Djamel‐eddine Benhaddouche
Journal articles
hal-03754554v1
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Adapted Protocol for Saccharibacteria Cocultivation: Two New Members Join the Club of Candidate Phyla Radiation
Ahmad Ibrahim
,
Mohamad Maatouk
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Andriamiharimamy Rajaonison
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Rita Zgheib
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Gabriel Haddad
Journal articles
hal-03636811v1
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Small and Equipped: the Rich Repertoire of Antibiotic Resistance Genes in Candidate Phyla Radiation Genomes
Mohamad Maatouk
,
Ahmad Ibrahim
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Jean-Marc Rolain
,
Vicky Merhej
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Fadi Bittar
Journal articles
hal-03636728v1
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Identification of repositionable drugs with novel antimycotic activity by screening Prestwick Chemical Library against emerging invasive molds
Hanane Yousfi
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Stéphane Ranque
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Carole Cassagne
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Jean-Marc Rolain
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Fadi Bittar
Journal articles
hal-02464583v1
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Comparison of Three Skin Sampling Methods and Two Media for Culturing Malassezia Yeast
Abdourahim Abdillah
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Saber Khelaifia
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Didier Raoult
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Fadi Bittar
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Stephane Ranque
Journal articles
hal-03141598v1
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Gorillibacterium timonense sp. nov., isolated from an obese patient
Sokhna Ndongo
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Mamadou Beye
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Noemie Labas
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Fabrizio Di Pinto
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Magali Richez
Journal articles
hal-02502401v1
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Draft genome and description of Cohnella massiliensis sp. nov., a new bacterial species isolated from the blood culture of a hemodialysis patient
Rita Abou Abdallah
,
Jacques Bou Khalil
,
Claudia Andrieu
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Enora Tomei
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Nicholas Armstrong
Journal articles
hal-02202136v1
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Draft genome and description of Chryseobacterium phocaeense sp. nov.: a new bacterial species isolated from the sputum of a cystic fibrosis patient
Rita Abou Abdallah
,
Liliane Okdah
,
Jacques Bou Khalil
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Hussein Anani
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Pierre-Edouard Fournier
Journal articles
hal-02263553v1
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Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children
Aly Kodio
,
Drissa Coulibaly
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Abdoulaye Kassoum Koné
,
Salimata Konate
,
Safiatou Doumbo
Journal articles
hal-02454474v1
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Phoenicibacter congonensis gen. nov., sp. nov., a new genus isolated from the human gut and its description using a taxonogenomic approach
Melhem Bilen
,
Maxime Descartes Mbogning Fonkou
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Aurélia Caputo
,
Thi-Thien Nguyen
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Fabrizio Di Pinto
Journal articles
hal-02263646v1
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In vitro polymyxin activity against clinical multidrug-resistant fungi
Hanane Yousfi
,
Stéphane Ranque
,
Jean-Marc Rolain
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Fadi Bittar
Journal articles
hal-02159425v1
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Repurposing of ribavirin as an adjunct therapy against invasive Candida strains: In vitro study
Hanane Yousfi
,
Carole Cassagne
,
Stephane Ranque
,
Jean-Marc Rolain
,
Fadi Bittar
Journal articles
hal-02263610v1
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Noncontiguous finished genome sequence and description of Raoultibacter massiliensis gen. nov., sp. nov. and Raoultibacter timonensis sp. nov, two new bacterial species isolated from the human gut
Sory Ibrahima Traore
,
Melhem Bilen
,
Mamadou Beye
,
Awa Diop
,
Maxime Descartes Mbogning Fonkou
Journal articles
hal-02262558v1
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Taxonogenomics description of Parabacteroides timonensis sp. nov. isolated from a human stool sample
Melhem Bilen
,
Maxime Descartes Mbogning Fonkou
,
Saber Khelaifia
,
Enora Tomei
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Frederic Cadoret
Journal articles
hal-02006029v1
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Characterization of a New Ezakiella Isolated from the Human Vagina: Genome Sequence and Description of Ezakiella massiliensis sp nov.
Khoudia Diop
,
Claudia Andrieu
,
Caroline Michelle
,
Nicholas Armstrong
,
Fadi Bittar
Journal articles
hal-01780663v1
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Evaluation of two DNA extraction methods for the PCR-based detection of eukaryotic enteric pathogens in fecal samples
Estelle Menu
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Charles Mary
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Isabelle Toga
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Didier Raoult
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Stéphane Ranque
Journal articles
hal-02006222v1
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First Draft Genome Sequences of Two Bartonella tribocorum Strains from Laos and Cambodia
Linda Hadjadj
,
Tawisa Jiyipong
,
Fadi Bittar
,
Serge Morand
,
Jean-Marc Rolain
Journal articles
hal-02006202v1
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Metabarcoding analysis of eukaryotic microbiota in the gut of HIV-infected patients
Ibrahim Hamad
,
Rita Abou Abdallah
,
Isabelle Ravaux
,
Saadia Mokhtari
,
Herve Tissot-Dupont
Journal articles
hal-01765832v1
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Bacillus kwashiorkori sp nov., a new bacterial species isolated from a malnourished child using culturomics
El Hadji Seck
,
Mamadou Beye
,
Sory Ibrahima Traore
,
Saber Khelaifia
,
Caroline Michelle
Journal articles
hal-01780644v1
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Draft Genome and Description of Eisenbergiella massiliensis Strain AT11(T): A New Species Isolated from Human Feces After Bariatric Surgery
Amadou H. Togo
,
Awa Diop
,
Matthieu Million
,
Marie M. Maraninchi
,
Jean-Christophe J.-C. Lagier
Journal articles
hal-01910318v1
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Description of Chryseobacterium timonianum sp nov., isolated from a patient with pneumonia
Rita Abou Abdallah
,
Teresa Cimmino
,
Sophie Baron
,
Frederic Cadoret
,
Caroline Michelle
Journal articles
hal-01730980v1
|
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Many More Microbes in Humans: Enlarging the Microbiome Repertoire
Jean-Christophe J.-C. Lagier
,
Michel Drancourt
,
Remi Charrel
,
Fadi Bittar
,
Bernard La Scola
Journal articles
hal-01730977v1
|
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Hugonella massiliensis gen. nov., sp nov., genome sequence, and description of a new strictly anaerobic bacterium isolated from the human gut
Ziena Elsawi
,
Amadou Hamidou Togo
,
Mamadou Beye
,
Gregory Dubourg
,
Claudia Andrieu
Journal articles
hal-01774691v1
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Performance of Real-Time Polymerase Chain Reaction Assays for the Detection of 20 Gastrointestinal Parasites in Clinical Samples from Senegal
Doudou Sow
,
Philippe Parola
,
Khadime Sylla
,
Magatte Ndiaye
,
Pascal Delaunay
Journal articles
hal-01774347v1
|
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Molecular survey of Dirofilaria immitis and Dirofilaria repens by new real-time TaqMan® PCR assay in dogs and mosquitoes (Diptera: Culicidae) in Corsica (France)
Djamel Tahir
,
Fadi Bittar
,
Hélène Barré-Cardi
,
Doudou Sow
,
Mustapha Dahmani
Journal articles
hal-01478585v1
|
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Repertoire of human gut microbes
Perrine Hugon
,
Jean-Christophe J.-C. Lagier
,
Philippe Colson
,
Fadi Bittar
,
Didier Raoult
Journal articles
hal-01478556v1
|
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Culturomics and Amplicon-based Metagenomic Approaches for the Study of Fungal Population in Human Gut Microbiota
Ibrahim Hamad
,
Stephane Ranque
,
Esam I. Azhar
,
Muhammad Yasir
,
Asif A. Jiman-Fatani
Journal articles
hal-01729796v1
|
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Virtual special section `new challenges in antifungal therapy'
Stephane Ranque
,
Fadi Bittar
Journal articles
hal-01729790v1
|
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‘Clostridium massiliodielmoense’, a new species isolated from the human gut microbiota
Maryam Tidjani Alou
,
Cheikh Sokhna
,
Fadi Bittar
,
Saber Khelaifia
,
Pierre-Edouard Fournier
Journal articles
hal-01478544v1
|
|
Evaluation of a new extraction protocol for yeast identification by mass spectrometry
Frédérique Gouriet
,
Farida Ghiab
,
Carine Couderc
,
Fadi Bittar
,
Hervé Tissot Dupont
Journal articles
hal-01478536v1
|
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Culture of previously uncultured members of the human gut microbiota by culturomics
Jean-Christophe J.-C. Lagier
,
Saber Khelaifia
,
Maryam Tidjani Alou
,
Sokhna Ndongo
,
Niokhor Dione
Journal articles
hal-01453324v1
|
|
Non contiguous-finished genome sequence and description of Microbacterium gorillae sp. nov.
Linda Hadjadj
,
Jaishriram Rathored
,
Mamadou Bhoye Keita
,
Caroline Michelle
,
Anthony Levasseur
Journal articles
hal-01478559v1
|
|
Marseillibacter massiliensis gen. nov., sp. nov., a new bacterial genus isolated from the human gut.
S Ndongo
,
Grégory Dubourg
,
Fadi Bittar
,
Cheikh Sokhna
,
Pierre-Edouard Fournier
Journal articles
hal-01474968v1
|
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Noncontiguous finished genome sequence and description of Fusobacterium massiliense sp. nov. isolated from human duodenum
M Mailhe
,
Davide Ricaboni
,
V. Vitton
,
A. Benezech
,
Grégory Dubourg
Journal articles
hal-01475451v1
|
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Anaerococcus rubiinfantis sp nov., isolated from the gut microbiota of a Senegalese infant with severe acute malnutrition
Maryam Tidjani Alou
,
Saber Khelaifia
,
Caroline Michelle
,
Claudia Andrieu
,
Nicholas Armstrong
Journal articles
hal-01455591v1
|
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Mansonella, including a Potential New Species, as Common Parasites in Children in Gabon
Gaël Mourembou
,
Florence Fenollar
,
Jean Bernard Lekana-Douki
,
Angelique Ndjoyi Mbiguino
,
Sydney Maghendji Nzondo
Journal articles
hal-01478563v1
|
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Non contiguous-finished genome sequence and description of Bacillus jeddahensis sp. nov.
Fadi Bittar
,
Fehmida Bibi
,
Dhamodharan Ramasamy
,
Jean-Christophe J.-C. Lagier
,
Esam I. Azhar
Journal articles
hal-01478581v1
|
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Wild Gorillas as a Potential Reservoir of Leishmania major
Ibrahim Hamad
,
Claire-Lise Forestier
,
Martine Peeters
,
Eric Delaporte
,
Didier Raoult
Journal articles
hal-01478638v1
|
|
Reply to Bastien et al.
Ibrahim Hamad
,
Claire-Lise Forestier
,
Gilbert Greub
,
Katia Jaton
,
Didier Raoult
Journal articles
hal-01478605v1
|
|
Gorilla gorilla gorilla gut: a potential reservoir of pathogenic bacteria as revealed using culturomics and molecular tools
Fadi Bittar
,
Mamadou B. Keita
,
Jean-Christophe J.-C. Lagier
,
Martine Peeters
,
Eric Delaporte
Journal articles
hal-01241992v1
|
|
Non-contiguous finished genome sequence and description of Gorillibacterium massiliense gen. nov, sp. nov., a new member of the family Paenibacillaceae
Mamadou Bhoye Keita
,
Roshan Padhmanabhan
,
Aurélia Caputo
,
Catherine Robert
,
Eric Delaporte
Journal articles
hal-01478632v1
|
|
Detection of Termites and Other Insects Consumed by African Great Apes using Molecular Fecal Analysis
Ibrahim Hamad
,
Eric Delaporte
,
Didier Raoult
,
Fadi Bittar
Journal articles
hal-01478646v1
|
|
Non-contiguous finished genome sequence and description of Paenibacillus gorillae sp. nov.
Mamadou Bhoye Keita
,
Roshan Padhmananabhan
,
Aurélia Caputo
,
Catherine Robert
,
Eric Delaporte
Journal articles
hal-01478628v1
|
|
Pathogenic Eukaryotes in Gut Microbiota of Western Lowland Gorillas as Revealed by Molecular Survey
Ibrahim Hamad
,
Mamadou B. Keita
,
Martine Peeters
,
Eric Delaporte
,
Didier Raoult
Journal articles
hal-01478617v1
|
|
Looking in apes as a source of human pathogens
Mamadou B. Keita
,
Ibrahim Hamad
,
Fadi Bittar
Journal articles
hal-01478622v1
|
|
Phenotypic and genotypic properties of Microbacterium yannicii, a recently described multidrug resistant bacterium isolated from a lung transplanted patient with cystic fibrosis in France
Poonam Sharma
,
Seydina M Diene
,
Sandrine Thibeaut
,
Fadi Bittar
,
Véronique Roux
Journal articles
hal-01478651v1
|
|
Non-contiguous finished genome sequence and description of Bacillus massiliogorillae sp. nov.
Mamadou Bhoye Keita
,
Seydina M. Diene
,
Catherine Robert
,
Didier Raoult
,
Pierre-Edouard Fournier
Journal articles
hal-01478647v1
|
|
Molecular Detection of Microorganisms in Distal Airways of Patients Undergoing Lung Cancer Surgery
Xavier Benoit d'Journo
,
Fadi Bittar
,
Delphine Trousse
,
Francoise Gaillat
,
Christophe Doddoli
Journal articles
hal-01478660v1
|
|
Molecular Detection of Eukaryotes in a Single Human Stool Sample from Senegal
Ibrahim Hamad
,
Cheikh Sokhna
,
Didier Raoult
,
Fadi Bittar
Journal articles
hal-01478657v1
|
|
Outbreak of Corynebacterium pseudodiphtheriticum Infection in Cystic Fibrosis Patients, France
Fadi Bittar
,
Carole Cassagne
,
Emmanuelle Bosdure
,
Nathalie Stremler
,
Jean-Christophe Dubus
Journal articles
hal-01478672v1
|
|
Nocardia farcinica lung infection in a patient with cystic fibrosis: a case report
Fadi Bittar
,
Nathalie Stremler
,
Jean-Pierre Audié
,
Jean-Christophe Dubus
,
Jacques Sarles
Journal articles
hal-01478680v1
|
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MALDI-TOF-MS for rapid detection of staphylococcal Panton–Valentine leukocidin
Fadi Bittar
,
Zoulikha Ouchenane
,
Farida Smati
,
Didier Raoult
,
Jean-Marc Rolain
Journal articles
hal-00556340v1
|
|
Genomic analysis of an emerging multiresistant Staphylococcus aureus strain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic inducible bacteriophage
Jean-Marc Rolain
,
Patrice Francois
,
David Hernandez
,
Fadi Bittar
,
Herve Richet
Journal articles
hal-01478692v1
|
|
Inquilinus limosus and Cystic Fibrosis
Fadi Bittar
,
Anne Leydier
,
Emmanuelle Bosdure
,
Alexandre Toro
,
Martine Reynaud-Gaubert
Journal articles
hal-01478698v1
|
|
Acetobacter indonesiensis Pneumonia after Lung Transplant
Fadi Bittar
,
Martine Reynaud-Gaubert
,
Pascal Thomas
,
Stéphanie Boniface
,
Didier Raoult
Journal articles
hal-01478697v1
|
|
Molecular Detection of Multiple Emerging Pathogens in Sputa from Cystic Fibrosis Patients
Fadi Bittar
,
Hervé Richet
,
Jean-Christophe Dubus
,
Martine Reynaud-Gaubert
,
Nathalie Stremler
Journal articles
hal-01477648v1
|
|
First isolation of two colistin-resistant emerging pathogens, Brevundimonas diminuta and Ochrobactrum anthropi, in a woman with cystic fibrosis: a case report
Magalie Menuet
,
Fadi Bittar
,
Nathalie Stremler
,
Jean-Christophe Dubus
,
Jacques Sarles
Journal articles
hal-01478694v1
|