Frederic Hamelin

Publications

Article dans une revue (41)

How coevolution in daily activity rhythms governs encounters between predator and prey Etienne Sirot,Thomas Benoit,Frédéric Hamelin Animal Behaviour, 2025, 221, pp.123078. ⟨10.1016/j.anbehav.2025.123078⟩ Article dans une revue hal-05024961v1
Taking fear back into the marginal value theorem: the rMVT and optimal boldness Vincent Calcagno,Frédéric Grognard,Frédéric M. Hamelin,Ludovic Mailleret Evolution - International Journal of Organic Evolution, 2025, qpaf100. ⟨10.1093/evolut/qpaf100⟩ Article dans une revue hal-05248388v1
From Chaos to Clarity: Deriving Meaningful Biology from Big Data in Plant Pathology Nik Cunniffe,Kaitlin M. Gold,Frédéric M. Hamelin,Juan A. Navas-Cortés,Neha Potniset al. Phytopathology, 2025, 115 (10), pp.1240-1244. ⟨10.1094/phyto-10-25-0328-fi⟩ Article dans une revue hal-05353943v1
Opportunities and Challenges in Combining Optical Sensing and Epidemiological Modelling Alexey Mikaberidze,C. D. Cruz,Ayalsew Zerihun,Abel Barreto,Pieter Becket al. Phytopathology, 2025, 115 (10), pp.1260-1285. ⟨10.1094/phyto-11-24-0359-fi⟩ Article dans une revue hal-05100639v1
Selfish Grower Behavior Can Group-optimally Eradicate Plant Diseases Caused by Coinfection Frank Hilker,Lea-Deborah Kolb,Frédéric M. Hamelin International Game Theory Review, 2024, 26 (2), pp.2440006. ⟨10.1142/s0219198924400061⟩ Article dans une revue hal-04576164v1
Combining Masculinizing Resistance, Rotation, and Biocontrol to Achieve Durable Suppression of the Potato Pale Cyst Nematode: A Model Israël Tankam-Chedjou,Josselin Montarry,Sylvain Fournet,Frédéric M. Hamelin Evolutionary Applications, 2024, 17 (9), pp.e70012. ⟨10.1111/eva.70012⟩ Article dans une revue hal-04720055v1
Spatial spread of infectious diseases with conditional vector preferences Frédéric Hamelin,Frank Hilker,Yves Dumont Journal of Mathematical Biology, 2023, 87 (2), pp.38. ⟨10.1007/s00285-023-01972-y⟩ Article dans une revue hal-04177516v1
Improving sustainable crop protection using population genetics concepts Méline Saubin,Clémentine Louet,Lydia Bousset,Frédéric Fabre,Pascal Freyet al. Molecular Ecology, 2023, 32 (10), pp.2461-2471. ⟨10.1111/mec.16634⟩ Article dans une revue (article de synthèse) hal-03394837v2
Emerging Themes and Approaches in Plant Virus Epidemiology Mike Jeger,Frédéric M. Hamelin,Nik Cunniffe Phytopathology, 2023, Phytopathology, 113 (9), pp.1630-1646. ⟨10.1094/PHYTO-10-22-0378-V⟩ Article dans une revue hal-04338724v1
The proportion of resistant hosts in mixtures should be biased towards the resistance with the lowest breaking cost Pauline Clin,Frédéric Grognard,Didier Andrivon,Ludovic Mailleret,Frédéric M. Hamelin PLoS Computational Biology, 2023, 19 (5), pp.e1011146. ⟨10.1371/journal.pcbi.1011146⟩ Article dans une revue hal-04143995v1
Imaging with spatio-temporal modelling to characterize the dynamics of plant-pathogen lesions Melen Leclerc,Stéphane Jumel,Frédéric M. Hamelin,Rémi Treilhaud,Nicolas Pariseyet al. PLoS Computational Biology, 2023, 19 (11), pp.e1011627. ⟨10.1371/journal.pcbi.1011627⟩ Article dans une revue hal-04312350v2
Metacommunity dynamics and the detection of species associations in co-occurrence analyses: Why patch disturbance matters Vincent Calcagno,Nik J. Cunniffe,Frédéric Marie Hamelin Functional Ecology, 2022, 36 (6), pp.1483-1499. ⟨10.1111/1365-2435.14047⟩ Article dans une revue hal-03713124v1
How growers make decisions impacts plant disease control Rachel E. Murray-Watson,Frédéric M. Hamelin,Nik J. Cunniffe PLoS Computational Biology, 2022, 18 (8), pp.e1010309. ⟨10.1371/journal.pcbi.1010309⟩ Article dans une revue hal-04069402v1
Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds Frédéric M. Hamelin,Y. Mammeri,Y. Aigu,S. E. Strelkov,M. A. Lewis Bulletin of Mathematical Biology, 2022, 84 (7), pp.68. ⟨10.1007/s11538-022-01023-5⟩ Article dans une revue hal-03684083v1
Host mixtures for plant disease control: Benefits from pathogen selection and immune priming Pauline Clin,Frédéric Grognard,Didier Andrivon,Ludovic Mailleret,Frédéric Hamelin Evolutionary Applications, 2022, 15 (6), pp.967-975. ⟨10.1111/eva.13386⟩ Article dans une revue hal-03676499v1
Epidemiological and ecological consequences of virus manipulation of host and vector in plant virus transmission Nik Cunniffe,Nick Taylor,Frédéric Marie Hamelin,Michael Jeger PLoS Computational Biology, 2021, 17 (12), pp.e1009759. ⟨10.1371/journal.pcbi.1009759⟩ Article dans une revue hal-03619965v1
Optimal Control of Plant Disease Epidemics with Clean Seed Usage Frédéric Marie Hamelin,Brady Bowen,Pierre Bernhard,Vushrali A Bokil Bulletin of Mathematical Biology, 2021, 83 (5), pp.46. ⟨10.1007/s11538-021-00872-w⟩ Article dans une revue hal-03200491v1
De nouvelles propriétés du pic épidémique Nicolas Bacaër,Frédéric Hamelin,Hisashi Inaba Quadrature, 2021, 119, pp.40-47 Article dans une revue hal-03008502v2
Taking advantage of pathogen diversity and immune priming to minimize disease prevalence in host mixtures: a model Pauline Clin,Frédéric Grognard,Ludovic Mailleret,Florence Val,Didier Andrivonet al. Phytopathology, 2021, 111 (7), pp.1219-1227. ⟨10.1094/PHYTO-09-20-0429-R⟩ Article dans une revue (article de synthèse) hal-03124229v1
How optimal foragers should respond to habitat changes: on the consequences of habitat conversion Vincent Calcagno,Frédéric Marie Hamelin,Ludovic Mailleret,Frédéric Grognard Theoretical Ecology, 2020, 13 (2), pp.165-175. ⟨10.1007/s12080-019-00437-7⟩ Article dans une revue hal-02392973v1
Separate seasons of infection and reproduction can lead to multi-year population cycles F.M. Hilker,T.A. Sun,L.J.S. Allen,Frédéric Marie Hamelin Journal of Theoretical Biology, 2020, 489, pp.110158. ⟨10.1016/j.jtbi.2020.110158⟩ Article dans une revue hal-03140204v1
Modelling Vector Transmission and Epidemiology of Co-Infecting Plant Viruses Linda J S Allen,Vrushali A Bokil,Nik J Cunniffe,Frédéric Marie Hamelin,Frank M Hilkeret al. Viruses, 2019, 11 (12), pp.1153. ⟨10.3390/v11121153⟩ Article dans une revue hal-02735995v1
Coinfections by noninteracting pathogens are not independent and require new tests of interaction Frédéric Marie Hamelin,Linda J S Allen,Vrushali A Bokil,Louis J Gross,Frank M Hilkeret al. PLoS Biology, 2019, 17 (12), pp.e3000551. ⟨10.1371/journal.pbio.3000551⟩ Article dans une revue hal-02749742v1
Assessing the effects of quantitative host resistance on the life-history traits of sporulating parasites with growing lesions Melen Leclerc,Julie a J Clément,Didier Andrivon,Frédéric Marie Hamelin Proceedings of the Royal Society B: Biological Sciences, 2019, 286 (1912), pp.20191244. ⟨10.1098/rspb.2019.1244⟩ Article dans une revue hal-02352206v1
The evolution of parasitic and mutualistic plant–virus symbioses through transmission-virulence trade-offs Frédéric Marie Hamelin,Franck M. Hilker,Anthony T. Sun,Michael. J. Jeger,M.Reza Hajimoradet al. Virus Research, 2017, 241, pp.77-87. ⟨10.1016/j.virusres.2017.04.011⟩ Article dans une revue hal-02054006v1
Mate Limitation in Fungal Plant Parasites Can Lead to Cyclic Epidemics in Perennial Host Populations Virginie Ravigné,Valérie Lemesle,Alicia Walter,Ludovic Mailleret,Frédéric Marie Hamelin Bulletin of Mathematical Biology, 2017, 73 (3), pp.1 - 447. ⟨10.1007/s11538-016-0240-7⟩ Article dans une revue hal-01569465v1
Modeling Virus Coinfection to Inform Management of Maize Lethal Necrosis in Kenya. Frank M Hilker,Linda J S Allen,Vrushali A Bokil,Cheryl J Briggs,Zhilan Fenget al. Phytopathology, 2017, 107 (10), pp.1095-1108. ⟨10.1094/PHYTO-03-17-0080-FI⟩ Article dans une revue hal-02618274v1
Adaptation to resistant hosts increases fitness on susceptible hosts in the plant parasitic nematode [i]Globodera pallida.[/i] Sylvain Fournet,Delphine Eoche-Bosy,Lionel Renault,Frédéric Marie Hamelin,Josselin Montarry Ecology and Evolution, 2016, 6 (8), pp.2559-2568. ⟨10.1002/ece3.2079⟩ Article dans une revue hal-01345816v1
Temporal niche differentiation of parasites sharing the same plant host: oak powdery mildew as a case study Frédéric Marie Hamelin,Anne Bisson,Marie-Laure Desprez Loustau,Frédéric Fabre,Ludovic Mailleret Ecosphere, 2016, 7 (11), pp.e01517. ⟨10.1002/ecs2.1517⟩ Article dans une revue hal-01402248v1
Mate Finding, Sexual Spore Production, and the Spread of Fungal Plant Parasites Frédéric Marie Hamelin,François Castella,Valentin Doli,Benoit Marçais,Virginie Ravignéet al. Bulletin of Mathematical Biology, 2016, 78 (4), pp.695-712. ⟨10.1007/s11538-016-0157-1⟩ Article dans une revue hal-01313012v1
The evolution of plant virus transmission pathways Frédéric Marie Hamelin,L. J. S. Allen,H. R. Prendeville,M. R. Hajimorad,M. J. Jeger Journal of Theoretical Biology, 2016, 396, pp.75-89. ⟨10.1016/j.jtbi.2016.02.017⟩ Article dans une revue hal-02637678v1
Sharing a resource with randomly arriving foragers Pierre Bernhard,Frédéric Marie Hamelin Mathematical Biosciences, 2016, 273 (91), pp.91-101. ⟨10.1016/j.mbs.2016.01.004⟩ Article dans une revue hal-01294950v1
Evolution of dispersal in asexual populations: to be independent, clumped or grouped? Samuel S. Soubeyrand,Ivan I. Sache,Frédéric Marie Hamelin,Etienne K. Klein Evolutionary Ecology, 2015, 29 (6), pp.947-963. ⟨10.1007/s10682-015-9768-5⟩ Article dans une revue hal-01584416v1
Simple signaling games of sexual selection (Grafen’s revisited) Pierre Bernhard,Frédéric Marie Hamelin Journal of Mathematical Biology, 2014, 69 (6-7), pp.1719-1742. ⟨10.1007/s00285-013-0745-8⟩ Article dans une revue hal-00933425v1
The functional response predicts the effect of resource distribution on the optimal movement rate of consumers Vincent Calcagno,Frédéric Grognard,Frédéric Marie Hamelin,Eric Wajnberg,Ludovic Mailleret Ecology Letters, 2014, 17 (12), pp.1570-1579. ⟨10.1111/ele.12379⟩ Article dans une revue istex hal-01084299v1
Allee Effects and the Evolution of Polymorphism in Cyclic Parthenogens Magda Castel,Ludovic Mailleret,Didier Andrivon,Virginie Ravigné,Frédéric Marie Hamelin The American Naturalist, 2014, 183 (3), pp.E75-E88. ⟨10.1086/674828⟩ Article dans une revue hal-00854466v1
The hard life of Phytophthora infestans: when trade-offs shape evolution in a biotrophic plant pathogen Didier Andrivon,Josselin Montarry,Roselyne Corbière,Claudine Pasco,Isabelle Glaiset al. Plant Pathology, 2013, 62, pp.28-35. ⟨10.1111/ppa.12164⟩ Article dans une revue hal-01208699v1
From elaborate to compact seasonal plant epidemic models and back: is competitive exclusion in the details? Ludovic L. Mailleret,Magda M. Castel,Josselin Montarry,Frédéric Marie Hamelin Theoretical Ecology, 2012, 5 (3), pp.311 - 324. ⟨10.1007/s12080-011-0126-0⟩ Article dans une revue hal-01004161v1
Seasonality and the evolutionary divergence of plant parasites Frédéric Marie Hamelin,Magda Castel,Sylvain Poggi,Didier Andrivon,Ludovic Mailleret Ecology, 2011, 92 (12), pp.2159-2166. ⟨10.1890/10-2442.1⟩ Article dans une revue hal-00729263v1
Fitness costs associated with unnecessary virulence factors and life history traits: evolutionary insights from the potato late blight pathogen Phytophthora infestans. Josselin Montarry,Frédéric Marie Hamelin,I. Glais,R. Corbi,Didier Andrivon BMC Evolutionary Biology, 2010, 10 (283), pp.283. ⟨10.1186/1471-2148-10-283⟩ Article dans une revue hal-00729514v1
A differential game theoretical analysis of mechanistic models for territoriality Frédéric Marie Hamelin,Mark Lewis Journal of Mathematical Biology, 2009, 61 (5), pp.665-694. ⟨10.1007/s00285-009-0316-1⟩ Article dans une revue istex hal-02655608v1

Chapitre d'ouvrage (2)

Coévolution des hôtes et de leurs parasites : la théorie Aurélien Tellier,Frédéric Marie Hamelin L'immunité des plantes. Pour des cultures résistantes aux maladies, Editions Quae, 2021, 9782759232338 Chapitre d'ouvrage hal-03316031v1
The ecological and evolutionary trajectory of oak powdery mildew in Europe Marie-Laure Desprez-Loustau,Frédéric Marie Hamelin,Benoit Marçais Wildlife Disease Ecology, 1, Cambridge University Press, pp.429-457, 2019, ⟨10.1017/9781316479964.015⟩ Chapitre d'ouvrage hal-02434813v1

Pré-publication, Document de travail (3)

Taking fear back into the Marginal Value Theorem: the risk-MVT and optimal boldness Vincent Calcagno,Frédéric Grognard,Frédéric M Hamelin,Ludovic Mailleret 2024 Pré-publication, Document de travail hal-04892074v1
Identifiability and Observability in Epidemiological Models - a survey Nik Cunniffe,Frédéric Hamelin,Abderrahman Iggidr,Alain Rapaport,Gauthier Sallet 2023 Pré-publication, Document de travail (preprint/prepublication) hal-02995562v3
Estimating parameters and states of an epidemic model using observers Frédéric M. Hamelin,Abderrahman Iggidr,Alain Rapaport,Gauthier Sallet,Max O. Souza 2022 Pré-publication, Document de travail hal-04038203v1

Thèse (2)

Jeux dynamiques en écologie du comportement Frédéric Marie Hamelin Sciences du Vivant [q-bio]. Université Nice Sophia Antipolis, 2007. Français. ⟨NNT : ⟩ Thèse tel-02819237v1
Jeux dynamiques en ecologie du comportement Frédéric Marie Hamelin domain_other. Université Nice Sophia Antipolis, 2007. Français. ⟨NNT : ⟩ Thèse tel-00297995v1