Gabriel KROUK

Publications

Communication dans un congrès (53)

Co-organisateur de la session P2 (International Plant Systems Biology) Gabriel Krouk Co-organisateur de la session P2 (International Plant Systems Biology), Jul 2026, Florence, Italy Communication dans un congrès hal-05596813v1
L'apprentissage automatique et l'IA au service de la biologie végétale et au-delà Gabriel Krouk Intelligence Artificielle, Biotechnologies & Agriculture, Oct 2025, Paris, France Communication dans un congrès hal-05603283v1
Examples of machine learning to advance (plant) biology Gabriel Krouk PLant science in the ANThropocene - PLANT, Mar 2025, Saclay, France Communication dans un congrès hal-05022974v1
From architectural to functional high throughput root phenotyping: towards new breeding tools Christophe Salon,Raffaella Balestrini,Bastien Billot,Francesca Degan,Pierre Dubreuilet al. Joint international conference, crop/plant modeling, big data and applications, Nov 2025, Nanchang, China Communication dans un congrès hal-05481946v1
Nitrogen Signaling Interactions and a New Kind of GWAS Gabriel Krouk 1. PlantACT! Conference, Mar 2024, Düsseldorf, Germany Communication dans un congrès hal-04877716v1
Next-Gen GWAS to Explore Epistatic Architecture of Nutrient Content in Plants and Our Path Towards Human Trait Studies Gabriel Krouk SEB Conference Prague 2024, Jul 2024, Prague, Czech Republic Communication dans un congrès hal-04877709v1
Unraveling nitrogen-iron-sulfur interaction to improve ammonium use efficiency in monocots L Urmeneta Garín,Javier Canales,Gabriel Krouk,M.B. Gonzalez-Moro,Daniel Marino 17. Plant Molecular Biology Meeting (RBMP 2024), Jul 2024, Castellon de la Plana, Spain Communication dans un congrès hal-05084633v1
Generative AI to Design new Peptides to control protein function Gabriel Krouk 5. Next-Generation Synthetic Biology (NGSB24), Dec 2024, Ghent, Belgium Communication dans un congrès hal-04877737v1
Plenary Keynote: Machine learning, artificial intelligence used for plant biology and beyond Gabriel Krouk SAFA Doctoral Annual Meeting, Sep 2024, Castellania, Italy Communication dans un congrès hal-04877727v1
Comment l’intelligence artificielle générative revisite nos questions ? : Quelles applications dans nos domaines ? Gabriel Krouk Journees scientifiques BAP 2024, INRAE, Sep 2024, Verneuil-sur-Avre, France Communication dans un congrès hal-04737855v1
Systems biology of nutrient use&quot; dans la Session 2: Nitrogen Use Efficiency: Enhancing Plant Nitrogen Use and Avoiding Nitrogenous Emissions Gabriel Krouk 1. PlantACT! Conference, Mar 2024, Düsseldorf, Germany Communication dans un congrès hal-04739803v1
New developments towards high throughput phenotyping studies devoted to innovative plant breeding tools Christophe Salon,Arkoum, Mustapha,Bastien Billot,Pierre Dubreuil,Florian Frugieret al. 3. Colloque de la North East Agricultural University. International Forum of Intelligent Agriculture, Jan 2023, Online, China Communication dans un congrès hal-03994719v1
Within a high throughput phenotyping platform, mix ecophysiology, microbial ecology, molecular physiology and genetics and stir: the recipe of new breeding tools Christophe Salon,Mustapha Arkoun,Florian Frugier,Bastien Billot,Manuel Blouinet al. 3. Asia-Pacific Plant Phenomics International Conference, Jul 2023, Sanya, China Communication dans un congrès hal-04205984v1
A hydro-reporter to unravel the early phases of water deficit in plants Yann Boursiac,Amandine Crabos,Yunji Huang,Thomas Boursat,Christophe Maurelet al. MIFOBIO meeting (Microscopy for Functional Biology), Nov 2023, Presqu'île de Giens, France Communication dans un congrès hal-04460176v1
Modeling water transport and perceiving water deficit Yann Boursiac,Amandine Crabos,Yunji Huang,Thomas Boursat,Christophe Maurelet al. 3. INUPRAG Symposium on Integrative Plant Biology, Feb 2023, Umeå, Sweden Communication dans un congrès hal-04460135v1
From morphological to functional root traits assessment with high throughpout phenotyping Christophe Salon,Marion Prudent,Mustapha Arkoun,Florian Frugier,Bastien Billotet al. International Symposium “Frontiers in the development and application of plant phenotyping: What are we seeking in plant phenotyping?, Oct 2023, Tokyo, Japan Communication dans un congrès hal-04224465v1
Nutritional interactions in plants (N x P) and new type of GWAS providing full epistatic maps with a gene resolution Arthur Poitout,Gabriel Krouk,Benoit Lacombe,Sandrine Ruffel 33. International Conference on Arabidopsis Research ICAR2023, Jun 2023, Chiba, Japan Communication dans un congrès hal-04744045v1
A systems view of nitrogen signaling interactions Gabriel Krouk SEB Annual Conference 2022, Jul 2022, Montpellier, France Communication dans un congrès hal-04902268v1
Nitrogen Signaling interactions in plants Gabriel Krouk Novel approaches and technologies for actual and future challenges in agricultural chemistry, Feb 2022, Udine, Italy Communication dans un congrès hal-04902160v1
Early perception of water deficit in roots Yann Boursiac,Amandine Crabos,Huang Yunji,Christophe Maurel,Sandrine Ruffelet al. Réunion GDR Phyp, Mar 2022, Carry-Le-Rouet, France Communication dans un congrès hal-04164260v1
Modeling and Gene Regulatory Networks Gabriel Krouk Spatial and Temporal Dynamics in Plant Biology, Gordon Research Conference, Jun 2022, Holderness, United States Communication dans un congrès hal-04902214v1
Les défis méthodologiques du phénotypage Haut Débit - Expectations of plant high throughput phenotyping and associated tools and methods Christophe Salon,Arkoum, Mustapha,Bastien Billiot,Virginie Bourion,Pierre Dubreuilet al. Prospectives de l’INEE, Institut Ecologie et environnement du CNRS, Oct 2022, La Rochelle, France Communication dans un congrès hal-03994582v1
A systems approach to plant signaling interactions Gabriel Krouk Plant Science for Climate Emergency, VIB Conference, Jun 2021, Online, Belgium Communication dans un congrès hal-04902229v1
Going back to roots: combining phenotyping, ecophysiology and molecular physiology Christophe Salon,Virginie Bourion,Pierre Dubreuil,Christian Jeudy,Gabriel Krouket al. “European Legumes in Transition” Webinar-Series of the projects LEGVALUE and TRUE for Decisionmakers and Stakeholders, May 2021, virtuel, France Communication dans un congrès hal-03299623v1
Regulatory Network behind Systemic Nitrogen Signaling in Arabidopsis Arthur Poitout,Gabriel Krouk,Benoit Lacombe,Sandrine Ruffel 31. International Conference on Arabidopsis Research ICAR 2021, The North American Arabidopsis Steering Committee (NAASC), Jun 2021, Online, United States Communication dans un congrès hal-04749683v1
Root ubiquitinome under osmotic stress Nathalie Berger,Vincent Demolombe,Sonia Hem,Valérie Rofidal,Laura Steinmannet al. INRAE / Protéomevert, INRAE; Visioconférence, Jun 2021, Online, France Communication dans un congrès hal-04178068v1
Root ubiquitinome under osmotic stress Nathalie Berger,Vincent Demolombe,Sonia Hem,Valérie Rofidal,Laura Steinmannet al. INPPO International Plant Proteomics Organization, Visioconférence, Mar 2021, Online, France Communication dans un congrès hal-04178284v1
Determinisms of plant and microbiome interactions : a multidisciplinary approach involving high-throughput phenotyping Christophe Salon,Arkoum, Mustapha,Bastien Billot,Manuel Blouin,Virginie Bourionet al. North East Agricultural University lectures, China, Nov 2021, Online, China Communication dans un congrès hal-03585274v1
Phenotyping, ecophysiology and molecular physiology to characterize plant root system architecture and plant-plant and plant-microorganisms interactions Christophe Salon,Virginie Bourion,Pierre Dubreuil,Christian Jeudy,Gabriel Krouket al. EPPN 2021 European Plant Phenotyping Network, May 2021, Vituel, France Communication dans un congrès hal-03299527v1
Regulatory Network behind Systemic Nitrogen Signaling, in Arabidopsis Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Novák,Gabriel Krouket al. International Workshop on organic nitrogen and plant nutrition (OrgN2020), Jan 2020, Ascona, Switzerland Communication dans un congrès hal-02961496v1
High-throughput phenotyping : characterizing physiological and genetic determinants of key traits of the root system Christophe Salon,Virginie Bourion,Pierre Dubreuil,Christian Jeudy,Gabriel G. Krouket al. JST The Second International Workshop on Field Phenotyping and Modeling for Cultivation, Dec 2020, Dijon, France Communication dans un congrès hal-03099212v1
High-throughput phenotyping of key legumes (and others) root traits Christophe Salon,Virginie Bourion,Pierre Dubreuil,Christian Jeudy,Gabriel G. Krouket al. Conférence of the College of Agriculture, Northeast Agricultural University, Xiangfang district, Harbin, Heilongjiang Province, P.R.China, Nov 2020, Heilongjiang Province, China Communication dans un congrès hal-03101989v1
Looking back to roots: phenotyping facilities and applications. Web broadcast conference Christophe Salon,Virginie Bourion,V. Declerck,Pierre Dubreuil,Christian Jeudyet al. Web broadcast conference (> 5000 auditeurs), Apr 2020, Virtuel, France Communication dans un congrès hal-03610388v1
Interaction between systemic nitrogen signaling and hormones, in Arabidopsis Sandrine Ruffel,Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Nováket al. 23. International conference on plant growth substances IPGSA 2019, Jun 2019, Paris, France Communication dans un congrès hal-02951000v1
A Systems View of Nitrogen Signaling Interactions Gabriel Krouk The Keystone Symposia: Plant Signaling, Molecular Pathways and Network Integration, Jan 2018, Tahoe City, United States Communication dans un congrès hal-01848569v1
Following Turgor Pressure in Plant Cells Yann Boursiac,Didier Felbacq,Ana Maria Velez-Cardona,Amandine Crabos,Gabriel Krouket al. Workshop on Turgor Pressure, GDR PhyP - Biophysique et biomécanique des plantes, Oct 2018, Montpellier, France Communication dans un congrès hal-02935092v1
Interaction between systemic nitrogen signaling and hormones, in arabidopsis Sandrine Ruffel,Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Nováket al. 12th Congress of the International Plant Molecular Biology, Aug 2018, Montpellier, France Communication dans un congrès hal-01868810v1
Regulatory Network behind Systemic Nitrogen Signaling, in Arabidopsis Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Novák,Gabriel Krouket al. The Coordination of Development, Sep 2018, Cambridge, United Kingdom Communication dans un congrès hal-02961538v1
Gene Regulatory Network Dynamics: Lessons from Plants Gabriel Krouk Gordon Research Conference :Plant Molecular Biology "Dynamic Plant Systems", Jun 2018, Holderness, United States Communication dans un congrès hal-01843736v1
A Systems View of Nitrogen Signaling Interactions Gabriel Krouk International Workshop on Plant Nutritional Responses, Dec 2019, Nagoya, Japan Communication dans un congrès hal-04902245v1
Réseaux de régulation génique : que nous apprennent les plantes ? Gabriel Krouk Les journées NETBIO, Nov 2017, Toulouse, France Communication dans un congrès hal-01840953v1
Nitrogen-related systemic signaling controlling root response to heterogeneous nitrate availability, in Arabidopsis Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Novák,Gabriel Krouket al. IGER International Symposium on Long-Distance signaling in Plants, Nov 2017, Nagoya, Japan Communication dans un congrès hal-02961553v1
Gene Regulatory Networks: Lessons from plants Gabriel Krouk Systems Biology Conference (LyonSysBio), Nov 2017, Villeurbanne, France Communication dans un congrès hal-01840943v1
Deciphering Cytokinin-Dependent Shoot Regulatory Network Controlling Root Response to Nitrate Heterogeneity Arthur Poitout,Gabriel Krouk,Benoît Lacombe,Sandrine Ruffel 3. International Conference Plant Nutrition, Growth & Environment Interactions, Feb 2017, Vienne, Austria Communication dans un congrès hal-02961593v1
Nitrate drives the phosphate starvation response through IDR1 Anna Medici,Wojciech Szponarski,Pierre Dangeville,Benoît Lacombe,Hatem Rouachedet al. International Congress "Nitrogen 2016" EMBO Conference: The Nitrogen Nutrition of Plant, EMBO. DEU., Aug 2016, Montpellier, France Communication dans un congrès hal-01383561v1
The Arabidopsis nitrate transceptor NRT1.1 NPF6.3 that governs distinct pathways is subjected to a complex post transcriptional regulation Eléonore Bouguyon,Marjorie Pervent,Francine Perrine-Walker,Juliette Rochette,Gabriel Krouket al. International Congress "Nitrogen 2016" EMBO Conference, Aug 2016, Montpellier, France Communication dans un congrès hal-01392869v1
New dimensions in the systems biology of nitrogen networks: time, dosage and nutrient interactions Joan Doidy,Kranthi Varala,Amy Marshall-Colón,Alessia Para,Jacopo Cirroneet al. Nitrogen 2016, the Nitrogen nutrition of plants, Aug 2016, Montpellier (34000), France Communication dans un congrès hal-05462673v1
A systems view of nitrogen signaling interactions Gabriel Krouk International Congress "Nitrogen 2016" EMBO Conference: The Nitrogen Nutrition of Plant, Aug 2016, Montpellier, France Communication dans un congrès hal-01384419v1
The Arabidopsis nitrate transceptor NRT1.1 governs distinct signaling pathways and controls root colonization via local modification of auxin fluxes Eléonore Bouguyon,Marjorie Pervent,Francine Perrine-Walker,Gabriel Krouk,Emmanuelle Mounieret al. 24th International Conference on Arabidopsis Research, Jun 2013, Sydney, Australia Communication dans un congrès hal-01601305v1
The Arabidopsis NRT1.1 transporter acts as a nitrate sensor and governs root colonization via modification of local auxin concentration Eléonore Bouguyon,Francine Manuella Perrine Walker,Gabriel Krouk,Emmanuelle Mounier,Marjorie Perventet al. 4th UPSC-INRA (UPRA) Meeting 2012, Mar 2012, Umeå, Sweden Communication dans un congrès hal-02803875v1
Systems approach to decipher transcriptional networks controlling nitrogen and hormones signaling interactions Gabriel Krouk Plant Growth, Nutrition and Environment interactions, Feb 2012, Vienna, Austria Communication dans un congrès hal-02803790v1
Systems approach to decipher transcriptional networks controlling nitrogen and hormones signaling interactions Gabriel Krouk Nutrient Sensing and uptake, 2010, San Diego, United States Communication dans un congrès hal-02812124v1
Nitrogen signalling from and to nitrate transporters in Arabidopsis Alain Gojon,Gabriel Krouk,Thomas Girin,Francine Manuella Perrine Walker,Saied El Khafafiet al. "Nitrogen 2010" 1st International Symposium on the Nitrogen Nutrition of Plants, Jul 2010, Aichi, Japan Communication dans un congrès hal-02814889v1

Article dans une revue (63)

Nitrate Sensing and Signaling in Plants: Comparative Insights and Nutritional Interactions Sandrine Ruffel,Jorge del Rosario,Benoît Lacombe,Hatem Rouached,Rodrigo A Gutiérrezet al. Annual Review of Plant Biology, 2025, 76 (1), pp.25-52. ⟨10.1146/annurev-arplant-083123-053039⟩ Article dans une revue hal-05076570v1
Nitrogen sensing and regulatory networks: It’s about time and space Carly M Shanks,Karin Rothkegel,Matthew D Brooks,Chia-Yi Cheng,José M Alvarezet al. The Plant cell, 2024, 36 (5), pp.1482-1503. ⟨10.1093/plcell/koae038⟩ Article dans une revue hal-04479330v1
Next-Gen GWAS: full 2D epistatic interaction maps retrieve part of missing heritability and improve phenotypic prediction Clément Carré,Jean-Baptiste Carluer,Christian Chaux,Chad Estoup-Streiff,Nicolas Rocheet al. Genome Biology, 2024, 25 (1), pp.76. ⟨10.1186/s13059-024-03202-0⟩ Article dans une revue hal-04532636v1
Recent advances in unraveling the mystery of combined nutrient stress in plants Megan Deloose,Joaquin Clúa,Huikyong Cho,Luqing Zheng,Khaled Masmoudiet al. The Plant Journal, 2024, 117 (6), pp.1764-1780. ⟨10.1111/tpj.16511⟩ Article dans une revue hal-04271704v1
Unleashing the potential of peptides in agriculture and beyond Gabriel Krouk,Wojciech Szponarski,Sandrine Ruffel Trends in Plant Science, 2023, 28 (7), pp.734-736. ⟨10.1016/j.tplants.2023.03.025⟩ Article dans une revue hal-04089178v1
Reduction in PLANT DEFENSIN 1 expression in Arabidopsis thaliana results in increased resistance to pathogens and zinc toxicity Nga N T Nguyen,Olivier Lamotte,Mohanad Alsulaiman,Sandrine Ruffel,Gabriel Krouket al. Journal of Experimental Botany, 2023, 74 (17), pp.5374-5393. ⟨10.1093/jxb/erad228⟩ Article dans une revue hal-04133593v2
Distinct early transcriptional regulations by turgor and osmotic potential in the root of Arabidopsis Amandine Crabos,Yunji Huang,Thomas Boursat,Christophe Maurel,Sandrine Ruffelet al. Journal of Experimental Botany, 2023, 74 (18), pp.5917-5930. ⟨10.1093/jxb/erad307⟩ Article dans une revue hal-04193805v1
ARSK1 activates TORC1 signaling to adjust growth to phosphate availability in Arabidopsis Huikyong Cho,Michael Banf,Zaigham Shahzad,Jelle van Leene,Flavia Bossiet al. Current Biology, 2023, 33 (9), pp.1778-1786.e5. ⟨10.1016/j.cub.2023.03.005⟩ Article dans une revue hal-04044845v1
PDX1.1-dependent biosynthesis of vitamin B6 protects roots from ammonium-induced oxidative stress Ying Liu,Rodolfo A Maniero,Ricardo F.H. Giehl,Michael Melzer,Priscille Steensmaet al. Molecular Plant, 2022, 15 (5), pp.820-839. ⟨10.1016/j.molp.2022.01.012⟩ Article dans une revue hal-03540746v1
Root Membrane Ubiquitinome under Short-Term Osmotic Stress Nathalie Berger,Vincent Demolombe,Sonia Hem,Valérie Rofidal,Laura Steinmannet al. International Journal of Molecular Sciences, 2022, 23 (4), pp.1956. ⟨10.3390/ijms23041956⟩ Article dans une revue hal-03593587v1
Two nitrate sensors, how many more? Jordan Courrèges-Clercq,Gabriel Krouk Nature Plants, 2022, 8 (11), pp.1212-1213. ⟨10.1038/s41477-022-01276-x⟩ Article dans une revue hal-03844368v1
GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways Alaeddine Safi,Anna Medici,Wojciech Szponarski,Florence Martin,Anne Clément-Vidalet al. Journal of Experimental Botany, 2021, 72 (10), pp.3881-3901. ⟨10.1093/jxb/erab114⟩ Article dans une revue hal-03217940v1
Nitrate signaling promotes plant growth by upregulating gibberellin biosynthesis and destabilization of DELLA proteins Lucie Camut,Barbora Gallova,Lucas Jilli,Mathilde Sirlin-Josserand,Esther Carreraet al. Current Biology, 2021, 31 (22), pp.4971-4982.e4. ⟨10.1016/j.cub.2021.09.024⟩ Article dans une revue hal-03840102v1
Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade José M. Alvarez,Anna-Lena Schinke,Matthew D. Brooks,Angelo Pasquino,Lauriebeth Leonelliet al. Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-14979-6⟩ Article dans une revue hal-02507235v1
Current status of the multinational Arabidopsis community Keith Adams,Wagner Araújo,Sebastien Aubourg,Sacha Baginsky,Erica Bakkeret al. Plant Direct, 2020, 4 (7), pp.e00248. ⟨10.1002/pld3.248⟩ Article dans une revue hal-02927028v1
Nitrogen and Phosphorus interactions in plants: from agronomic to physiological and molecular insights Gabriel Krouk,Takatoshi Kiba Current Opinion in Plant Biology, 2020, 57, pp.104-109. ⟨10.1016/j.pbi.2020.07.002⟩ Article dans une revue hal-02933543v1
The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate Amel Maghiaoui,Eléonore Bouguyon,Candela Cuesta,Francine Perrine-Walker,Carine Alconet al. Journal of Experimental Botany, 2020, 71 (15), pp.4480-4494. ⟨10.1093/jxb/eraa242/5840670⟩ Article dans une revue hal-02619371v1
Nitrate in 2020: Thirty Years from Transport to Signaling Networks Elena A. Vidal,José M Alvarez,Viviana Araus,Eleodoro Riveras,Matthew Brookset al. The Plant cell, 2020, 32 (7), pp.2094-2119. ⟨10.1105/tpc.19.00748⟩ Article dans une revue hal-02894020v1
iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community Pascal Falter-Braun,Siobhan Brady,Rodrigo Gutiérrez,Gloria Coruzzi,Gabriel Krouk Molecular Plant, 2019, 12 (6), pp.727-730. ⟨10.1016/j.molp.2019.05.005⟩ Article dans une revue hal-02139469v1
The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL5 Maintain ROS Homeostasis under High Nitrogen Provision Fanny Bellegarde,Amel Maghiaoui,Jossia Boucherez,Gabriel Krouk,Laurence Lejayet al. Plant Physiology, 2019, 180 (1), pp.582-592. ⟨10.1104/pp.18.01473⟩ Article dans une revue hal-02139390v1
Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants Anna Medici,Wojciech Szponarski,Pierre Dangeville,Alaeddine Safi,Indeewari Madhubhashini Dissanayakeet al. The Plant cell, 2019, 31 (5), pp.1171-1184. ⟨10.1105/tpc.18.00656⟩ Article dans une revue hal-02107616v1
Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions Matthew D Brooks,Jacopo Cirrone,Angelo V Pasquino,José M Alvarez,Joseph Swiftet al. Nature Communications, 2019, 10, pp.1569. ⟨10.1038/s41467-019-09522-1⟩ Article dans une revue hal-02122905v1
Getting to the Root of Plant Mineral Nutrition: Combinatorial Nutrient Stresses Reveal Emergent Properties Nadia Bouain,Gabriel Krouk,Benoît Lacombe,Hatem Rouached Trends in Plant Science, 2019, 24 (6), pp.542-552. ⟨10.1016/j.tplants.2019.03.008⟩ Article dans une revue hal-02139410v1
LPCAT1 controls phosphate homeostasis in a zinc-dependent manner. Mushtak Kisko,Nadia Bouain,Alaeddine Safi,Anna Medici,Robert C Akkerset al. eLife, 2018, 7, ⟨10.7554/eLife.32077⟩ Article dans une revue hal-01716614v1
Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve trans-Zeatin in Shoots Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondřej Novák,Gabriel Krouket al. The Plant cell, 2018, 30 (6), pp.1243-1257. ⟨10.1105/tpc.18.00011⟩ Article dans une revue hal-01777537v1
The world according to GARP transcription factors. Alaeddine Safi,Anna Medici,Wojciech Szponarski,Sandrine Ruffel,Benoît Lacombeet al. Current Opinion in Plant Biology, 2017, 39, pp.159-167. ⟨10.1016/j.pbi.2017.07.006⟩ Article dans une revue hal-01595209v1
The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology. Joanna Friesner,Sarah M Assmann,Ruth Bastow,Julia Bailey-Serres,Jim Beynonet al. Plant Physiology, 2017, 175 (4), pp.1499-1509. ⟨10.1104/pp.17.01490⟩ Article dans une revue hal-01769299v1
TransDetect identifies a new regulatory module controlling phosphate accumulation. Sikander Pal,Mushtak Kisko,Christian Dubos,Benoît Lacombe,Pierre Berthomieuet al. Plant Physiology, 2017, 175 (2), ⟨10.1104/pp.17.00568⟩ Article dans une revue hal-01578849v1
Reverse engineering highlights potential principles of large gene regulatory network design and learning. Clement Carre,André Mas,Gabriel Krouk npj Systems Biology and Applications, 2017, 3, pp.17. ⟨10.1038/s41540-017-0019-y⟩ Article dans une revue hal-01573563v1
Nitrate signalling: Calcium bridges the nitrate gap. Gabriel Krouk Nature Plants, 2017, 3, pp.17095. ⟨10.1038/nplants.2017.95⟩ Article dans une revue hal-01594831v1
Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root Daniela Ristova,Clement Carre,Marjorie Pervent,Anna Medici,Grace Jaeyoon Kimet al. Science Signaling, 2016, 9 (451), pp.rs13. ⟨10.1126/scisignal.aaf2768⟩ Article dans une revue hal-01595027v1
Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics Jorge Bellati,Chloé Champeyroux,Sonia Hem,Valerie Rofidal,Gabriel Krouket al. Molecular and Cellular Proteomics, 2016, 15 (11), mcp.M116.060087. ⟨10.1074/mcp.M116.060087⟩ Article dans une revue hal-01382938v1
Nitrate Controls Root Development through Post-Transcriptional Regulation of the NRT1.1/NPF6.3 transporter/sensor. Eléonore Bouguyon,Francine Perrine-Walker,Marjorie Pervent,Juliette Rochette,Candela Cuestaet al. Plant Physiology, 2016, 172 (2), ⟨10.1104/pp.16.01047⟩ Article dans une revue hal-01360480v1
Long-distance nitrate signaling displays cytokinin dependent and independent branches. Sandrine Ruffel,Arthur Poitout,Gabriel Krouk,Gloria M Coruzzi,Benoît Lacombe Journal of Integrative Plant Biology, 2016, 58 (3), pp.226-9. ⟨10.1111/jipb.12453⟩ Article dans une revue hal-01321526v1
Nitrate transport, sensing and responses in plants José A. O’brien,Andrea Vega,Eléonore Bouguyon,Gabriel Krouk,Alain Gojonet al. Molecular Plant, 2016, 9 (6), pp.837-856. ⟨10.1016/j.molp.2016.05.004⟩ Article dans une revue hal-01595480v1
Hormones and nitrate: a two-way connection. Gabriel Krouk Plant Molecular Biology, 2016, 91 (6), pp.599-606. ⟨10.1007/s11103-016-0463-x⟩ Article dans une revue hal-01321091v1
Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1 Éléonore Bouguyon,Frédéric Brun,Donaldo Meynard,Martin Kubeš,Marjorie Perventet al. Nature Plants, 2015, 1 (3), pp.15015. ⟨10.1038/nplants.2015.15⟩ Article dans une revue hal-01137861v1
GeneCloud Reveals Semantic Enrichment in Lists of Gene Descriptions Gabriel Krouk,Clément Carré,Cecile Fizames,Alain Gojon,Sandrine Ruffelet al. Plant Molecular Biology, 2015, 8 (6), pp.971-973. ⟨10.1016/j.molp.2015.02.005⟩ Article dans une revue hal-01180663v1
The primary nitrate response: a multifaceted signalling pathway. Anna Medici,Gabriel Krouk Journal of Experimental Botany, 2014, 65 (19), pp.5567-76. ⟨10.1093/jxb/eru245⟩ Article dans une revue hal-01118903v1
AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip. Anna Medici,Amy Marshall-Colon,Elsa Ronzier,Wojciech Szponarski,Rongchen Wanget al. Nature Communications, 2014, 6, pp.6274. ⟨10.1038/ncomms7274⟩ Article dans une revue hal-01141023v1
Finding a nitrogen niche: a systems integration of local and systemic nitrogen signalling in plants. Ying Li,Gabriel Krouk,Gloria M Coruzzi,Sandrine Ruffel Journal of Experimental Botany, 2014, 65 (19), pp.5601-10. ⟨10.1093/jxb/eru263⟩ Article dans une revue hal-01118819v1
Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis. Alessia Para,Ying Li,Amy Marshall-Colón,Kranthi Varala,Nancy J Francoeuret al. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (28), pp.10371-6. ⟨10.1073/pnas.1404657111⟩ Article dans une revue hal-01053035v1
Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture. Ulises Rosas,Angelica Cibrian-Jaramillo,Daniela Ristova,Joshua A Banta,Miriam L Giffordet al. Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (37), pp.15133-8. ⟨10.1073/pnas.1305883110⟩ Article dans une revue hal-00932276v1
ABA transport and transporters. Yann Boursiac,Sophie Léran,Claire Corratgé-Faillie,Alain Gojon,Gabriel Krouket al. Trends in Plant Science, 2013, 18 (6), pp.325-33. ⟨10.1016/j.tplants.2013.01.007⟩ Article dans une revue istex hal-00860434v1
Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. Elena A Vidal,Tomás C Moyano,Gabriel Krouk,Manpreet S Katari,Milos Tanurdzicet al. BMC Genomics, 2013, 14 (1), pp.701. ⟨10.1186/1471-2164-14-701⟩ Article dans une revue hal-00921251v1
A map of cell type-specific auxin responses. Bastiaan O R Bargmann,Steffen Vanneste,Gabriel Krouk,Tal Nawy,Idan Efroniet al. Molecular Systems Biology, 2013, 9, pp.688. ⟨10.1038/msb.2013.40⟩ Article dans une revue hal-00873845v1
TARGET: a transient transformation system for genome-wide transcription factor target discovery. Bastiaan O R Bargmann,Amy Marshall-Colon,Idan Efroni,Sandrine Ruffel,Kenneth D Birnbaumet al. Molecular Plant, 2013, 6 (3), pp.978-80. ⟨10.1093/mp/sst010⟩ Article dans une revue hal-00860342v1
RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis. Daniela Ristova,Ulises Rosas,Gabriel Krouk,Sandrine Ruffel,Kenneth D Birnbaumet al. Plant Physiology, 2013, 161 (3), pp.1086-96. ⟨10.1104/pp.112.210872⟩ Article dans une revue hal-00967016v1
Gene regulatory networks in plants: learning causality from time and perturbation. Gabriel Krouk,Jesse Lingeman,Amy Marshall Colon,Gloria Coruzzi,Dennis Shasha Genome Biology, 2013, 14 (6), pp.123. ⟨10.1186/gb-2013-14-6-123⟩ Article dans une revue hal-00920683v1
Améliorer l'utilisation du nitrate par les plantes Gabriel Krouk,Alain Gojon Biofutur, 2012, pp.41 Article dans une revue hal-02642232v1
Iron and ROS control of the DownSTream mRNA decay pathway is essential for plant fitness. Karl Ravet,Guilhem Reyt,Nicolas Arnaud,Gabriel Krouk,El-Batoul Djouaniet al. EMBO Journal, 2012, 31 (1), pp.175-86. ⟨10.1038/emboj.2011.341⟩ Article dans une revue hal-00777600v1
Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand Sandrine Ruffel,Gabriel Krouk,Daniela Ristova,Dennis Shasha,Kenneth D Birnbaumet al. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (45), pp.18524-9. ⟨10.1073/pnas.1108684108⟩ Article dans une revue hal-00662610v1
HIGH NITROGEN INSENSITIVE 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation. Thomas Widiez,El Sayed El Kafafi,Thomas Girin,Alexandre Berr,Sandrine Ruffelet al. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (32), pp.13329-34. ⟨10.1073/pnas.1017863108⟩ Article dans une revue hal-00623176v1
A framework integrating plant growth with hormones and nutrients. Gabriel Krouk,Sandrine Ruffel,Rodrigo A Gutiérrez,Alain Gojon,Nigel M Crawfordet al. Trends in Plant Science, 2011, 16 (4), pp.178-182. ⟨10.1016/j.tplants.2011.02.004⟩ Article dans une revue hal-00586321v1
[An original ion (nitrate) sensing mechanism: story of the discovery in plants and perspectives]. Gabriel Krouk,Alain Gojon Médecine/Sciences, 2011, 27 (12), pp.1045-7. ⟨10.1051/medsci/20112712002⟩ Article dans une revue hal-00662211v1
Nitrate transceptor(s) in plants. Alain Gojon,Gabriel Krouk,Francine Perrine-Walker,Edith Laugier Journal of Experimental Botany, 2011, 62 (7), pp.2299-308. ⟨10.1093/jxb/erq419⟩ Article dans une revue hal-00589335v1
Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate. Gabriel Krouk,Piotr Mirowski,Yann Lecun,Dennis E Shasha,Gloria M Coruzzi Genome Biology, 2010, 11 (12), pp.R123. ⟨10.1186/gb-2010-11-12-r123⟩ Article dans une revue hal-00553899v1
A systems view of responses to nutritional cues in Arabidopsis: toward a paradigm shift for predictive network modeling. Sandrine Ruffel,Gabriel Krouk,Gloria M Coruzzi Plant Physiology, 2010, 152 (2), pp.445-52. ⟨10.1104/pp.109.148502⟩ Article dans une revue hal-00457743v1
Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants. Gabriel Krouk,Benoît Lacombe,Agnieszka Bielach,Francine Perrine-Walker,Katerina Malinskaet al. Developmental Cell, 2010, 18 (6), pp.927-37. ⟨10.1016/j.devcel.2010.05.008⟩ Article dans une revue hal-00508268v1
Modeling the global effect of the basic-leucine zipper transcription factor 1 (bZIP1) on nitrogen and light regulation in Arabidopsis. Mariana Obertello,Gabriel Krouk,Manpreet S Katari,Suzan J Runko,Gloria M Coruzzi BMC Systems Biology, 2010, 4, pp.111. ⟨10.1186/1752-0509-4-111⟩ Article dans une revue hal-00533076v1
Nitrate signaling: adaptation to fluctuating environments. Gabriel Krouk,Nigel M Crawford,Gloria M Coruzzi,Yi-Fang Tsay Current Opinion in Plant Biology, 2010, 13 (3), pp.Article in Press. ⟨10.1016/j.pbi.2009.12.003⟩ Article dans une revue istex hal-00462476v1
A systems approach uncovers restrictions for signal interactions regulating genome-wide responses to nutritional cues in Arabidopsis Gabriel Krouk,Daniel Tranchina,Laurence Lejay-Lefebvre,Alexis A. Cruikshank,Dennis Shashaet al. PLoS Computational Biology, 2009, 5 (3), pp.e1000326. ⟨10.1371/journal.pcbi.1000326⟩ Article dans une revue hal-02653785v1
Regulation of the high-affinity NO3- uptake system by NRT1.1-mediated NO3- demand signaling in Arabidopsis. Gabriel Krouk,Pascal Tillard,Alain Gojon Plant Physiology, 2006, 142 (3), pp.1075-1086. ⟨10.1104/pp.106.087510⟩ Article dans une revue hal-00124930v1

Poster de conférence (15)

Investigation of transcription factor dynamics by super-resolution microscopy Jordan Courrèges-Clercq,Eric Hosy,Gabriel Krouk SEB Conference Prague 2024, Jul 2024, Prague, Czech Republic. Poster de conférence hal-04877703v1
Investigation of transcription factor dynamics by super-resolution microscopy Jordan Courrèges-Clercq,Eric Hosy,Gabriel Krouk Journée Posters IPSiM, May 2023, Montpellier, France Poster de conférence hal-04877933v1
Strategies of adaptation of the root acquisition system in a heterogeneous nitrate environment in Arabidopsis Cannelle Armengaud,Xingyu Zheng,Saket Navlakha,Amandine Crabos,Romain Fernandezet al. Journée Posters IPSiM, May 2023, Montpellier, France Poster de conférence hal-04877967v1
Investigation of transcription factor dynamics by super-resolution microscopy Jordan Courrèges-Clercq,Eric Hosy,Gabriel Krouk Imaging Life : the Future (MRI), Oct 2023, Montpellier, France. Poster de conférence hal-04877861v1
Shoot molecular mechanisms involved in root responses to nitrate heterogeneity Virginia Protto,Arthur Poitout,Benoît Lacombe,Gabriel Krouk,Sandrine Ruffel Journée Posters IPSiM, May 2023, Montpellier, France. Poster de conférence hal-04877944v1
A genetic and molecular approach to identify transcription factors controlling maize root adaptive response to water deficit Philippe Nacry,Morgan Maillard,Christian Jeudy,Mickael Lamboeuf,M Bellangeret al. 13. International Conference of the French Society of Plant Biology, Aug 2022, Montpellier, France Poster de conférence hal-04165717v1
Silencing of plant defensin type 1 reduces sensitivity to pathogens and zinc toxicity in arabidopsis thaliana Nga Thi Thuy Nguyen,Olivier Lamotte,Mohanad Alsulaiman,Sandrine Ruffel,Gabriel Krouket al. 13. International Conference of the French Society of Plant Biology, Aug 2022, Montpellier, France. Poster de conférence hal-04123213v1
A genetic and molecular approach to identify transcription factors controlling maize root adaptive response to water deficit Phillipe P. Nacry,M. Maillard,Christian Jeudy,Mickael Lamboeuf,M. Bellangeret al. EMBO Workshop. Molecular responses of plants facing climate change, Jun 2022, Montpellier, France. Poster de conférence hal-03714586v1
Root membrane ubiquitinome study identifies E2 Ub conjugating enzymes UBC32 and UBC34 that contribute to primary root growth under osmotic stress Nathalie Berger,Vincent Demolombe - Liozu,Sonia Hem,Valérie Rofidal,Gabriel Krouket al. 13. International Conference of the French Society of Plant Biology, Aug 2022, Montpellier, France Poster de conférence hal-04165488v1
NPK in Arabidopsis: Revisiting Murashige and Skoog in the Genomic Era Will E. Hinckley,Viviana Araus,Joan Doidy,Alessia Para,Sophia Shihet al. 12th Lab Plant Genomes, Systems Biology, and Engineering conference, Dec 2021, Cold Spring Harbor (New York), United States. Poster de conférence hal-05465266v1
A genetic and molecular approach to identify transcription factors controlling maize root adaptive response to water deficit Phillipe P. Nacry,M. Maillard,Christian Jeudy,Mickael Lamboeuf,M. Bellangeret al. ISRR11 and ROOTING2021 meeting « Roots never sleep », May 2021, Online, France. Poster de conférence hal-04169337v1
Welcome and Opening Gabriel Krouk EMBO Workshop on international Plant Systems Biology (iPSB), Apr 2021, Online, Germany. Poster de conférence hal-04902236v1
Root ubiquitinome under osmotic stress Nathalie Berger,Vincent Demolombe - Liozu,Sonia Hem,Valérie Rofidal,Laura Steinmannet al. INPPO International Plant Proteomics, Mar 2021, Online, France. Poster de conférence hal-04169599v1
Regulation of NRT2s transporter by the NRT1.1 dependent signaling pathway in response to high NO3 Valentin Chaput,Jianfu Li,Pascal Tillard,Tomás C Moyano,Gabriel Krouket al. 4th International symposium on the Nitrogen Nutrition of Plants, Sep 2019, Nanjing, China Poster de conférence hal-02947092v1
Interaction between nitrate-related long-distance signaling and hormones, in Arabidopsis Arthur Poitout,Amandine Crabos,Ivan Petřík,Ondrej Novák,Gabriel Krouket al. Plant Signaling: Molecular pathways and network integration, Jan 2018, Tahoe city, United States Poster de conférence hal-02961622v1

Pré-publication, Document de travail (8)

Classification and Regression Trees to predict Transcription Factor Combinatorial Interaction in scRNA-seq data Jean Baptiste Carluer,Laura Steinmann,Clément Carré,André Mas,Gabriel Krouk 2024 Pré-publication, Document de travail hal-04626016v1
PeTriBERT : Augmenting BERT with tridimensional encoding for inverse protein folding and design Baldwin Dumortier,Antoine Liutkus,Clément Carré,Gabriel Krouk 2022 Pré-publication, Document de travail hal-03759515v1
Nitrate-regulated growth processes involve activation of gibberellin pathway Lucie Camut,Barbora Gallova,Lucas Jilli,Mathilde Sirlin-Josserand,Esther Carreraet al. 2022 Pré-publication, Document de travail hal-03858033v1
Full epistatic interaction maps retrieve part of missing heritability and improve phenotypic prediction Clément Carré,Jean Baptiste Carluer,Christian Chaux,Nicolas Roche,André Maset al. 2022 Pré-publication, Document de travail hal-03749709v1
Root membrane ubiquitinome under short-term osmotic stress Nathalie Berger,Vincent Demolombe,Sonia Hem,Valérie Rofidal,Laura Steinmannet al. 2021 Pré-publication, Document de travail hal-03474600v1
HRS1/HHOs GARP transcription factors and reactive oxygen species are regulators of Arabidopsis nitrogen starvation response. Affiliation Alaeddine Safi,Anna Medici,Wojciech Szponarski,Amy Marshall-Colon,Sandrine Ruffelet al. 2018 Pré-publication, Document de travail (preprint/prepublication) hal-01777545v1
HNI9 and HY5 maintain ROS homeostasis under high nitrogen provision in Arabidopsis Fanny Bellegarde,Amel Maghiaoui,Jossia Boucherez,Gabriel Krouk,Laurence Lejayet al. 2018 Pré-publication, Document de travail hal-02788343v1
Revisiting the functional properties of NPF6.3/NRT1.1/CHL1 in xenopus oocytes Mélanie Noguero,Sophie Léran,Éléonore Bouguyon,Chantal Brachet,Pascal Tillardet al. 2018 Pré-publication, Document de travail (preprint/prepublication) hal-01777543v1

Chapitre d'ouvrage (1)

The TARGET System: Rapid Identification of Direct Targets of Transcription Factors by Gene Regulation in Plant Cells v2 Matthew D. Brooks,Kelsey M. Reed,Gabriel Krouk,Gloria M. Coruzzi,Bastiaan O. R. Bargmann Qi Song; Zhipeng Tao. Transcription Factor Regulatory Networks, 2594, Humana Press, pp.1-12, 2022, Methods in Molecular Biology, 978-1-0716-2814-0. ⟨10.1007/978-1-0716-2815-7_1⟩ Chapitre d'ouvrage hal-03687926v1

HDR (1)

A Systems View of Nitrogen Signaling Interactions Gabriel Krouk Life Sciences [q-bio]. 2015 HDR tel-02795453v1

Thèse (1)

Approche post-génomique du contrôle de l'absorption de l'azote minéral chez Arabidopsis thaliana Gabriel Krouk Sciences du Vivant [q-bio]. Ecole Nationale Supérieure Agronomique de Montpellier, 2006. Français. ⟨NNT : ⟩ Thèse tel-02821516v1