Nicolas Terrapon

Identifiants chercheurs

IdHAL :

gandarath

ORCID :

0000-0002-3693-6017

IdRef :

125207050

Publications

Article dans une revue (72)

Division of the large and multifunctional glycoside hydrolase family 2: high functional specificity and biochemical assays in the uncharacterized subfamilies Annie Lebreton,Marie-Line Garron,Marlene Vuillemin,Bo Pilgaard,Bastian Hornunget al. Biotechnology for Biofuels and Bioproducts, 2025, 18 (1), pp.68. ⟨10.1186/s13068-025-02669-8⟩ Article dans une revue hal-05285721v1
Structural and Functional Dissection of GH161 β-Glucan Phosphorylases: Molecular Specificities and Dynamics of Catalysis of Dimeric GH-Q Enzymes Nina Cooper,Simon Ladevèze,Ao Li,Ramteen Shayan,Régis Fauréet al. ACS Catalysis, 2025, 15 (22), pp.19312-19327. ⟨10.1021/acscatal.5c05191⟩ Article dans une revue hal-05377303v1
Bacterial polysaccharide lyase family 33: Specificity from an evolutionarily conserved binding tunnel Mélanie Loiodice,Elodie Drula,Zak Mciver,Svetlana Antonyuk,Arnaud Basléet al. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (7), pp.e2421623122. ⟨10.1073/pnas.2421623122⟩ Article dans une revue hal-04968947v1
Dividing the α-amylase family GH57 of starch hydrolases and related enzymes into subfamilies using evolutionary, clustering and functional criteria Adam Poláček,Vincent Lombard,Pedro Coutinho,Nicolas Terrapon,Štefan Janeček International Journal of Biological Macromolecules, 2025, 309 (2), pp.142823. ⟨10.1016/j.ijbiomac.2025.142823⟩ Article dans une revue hal-05163099v1
A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion Clelton Santos,Mariana Morais,Fernanda Mandelli,Evandro Lima,Renan Miyamotoet al. Nature, 2025, ⟨10.1038/s41586-024-08553-z⟩ Article dans une revue hal-04948755v1
Glycoside hydrolase–mediated glucomannan catabolism in Segatella copri , a target of microbiota-directed foods for malnourished children Cyrus Zhou,Matthew Hibberd,Evan Lee,Bo Pilgaard,Marlene Vuilleminet al. Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (49), pp.e2521522122. ⟨10.1073/pnas.2521522122⟩ Article dans une revue hal-05465980v1
Publisher Correction: A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion Clelton Santos,Mariana Morais,Fernanda Mandelli,Evandro Lima,Renan Miyamotoet al. Nature, 2025, 640 (8058), pp.E7-E7. ⟨10.1038/s41586-025-08872-9⟩ Article dans une revue hal-05507999v1
Snow- and ice-ecosystem cleaning capability of the pucciniomycotinous yeast Phenoliferia psychrophenolica Jade Ezzedine,Pierre Guenzi-Tiberi,Gaëlle Villain,Riccardo Aiese Cigliano,Yacine Diagneet al. Communications Biology, 2025, 8 (1), pp.1084. ⟨10.1038/s42003-025-08506-w⟩ Article dans une revue hal-05285714v1
A microbiome-directed therapeutic food for children recovering from severe acute malnutrition Steven Hartman,Matthew Hibberd,Ishita Mostafa,Nurun Naila,Md Munirul Islamet al. Science Translational Medicine, 2024, 16 (767), pp.eadn2366. ⟨10.1126/scitranslmed.adn2366⟩ Article dans une revue hal-04911133v1
Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems France Denoeud,Olivier Godfroy,Corinne Cruaud,Svenja Heesch,Zofia Nehret al. Cell, 2024, 187 (24), pp.6943-6965. ⟨10.1016/j.cell.2024.10.049⟩ Article dans une revue hal-04794231v1
Streptomyces castrisilvae sp. nov. and Streptomyces glycanivorans sp. nov., novel soil streptomycetes metabolizing mutan and alternan Tove Widén,Albert Tafur Rangel,Vincent Lombard,Elodie Drula,Scott Mazurkewichet al. International Journal of Systematic and Evolutionary Microbiology, 2024, 74 (9), pp.006514. ⟨10.1099/ijsem.0.006514⟩ Article dans une revue hal-04882192v1
Elizabethkingia anophelis MSU001 Isolated from Anopheles stephensi: Molecular Characterization and Comparative Genome Analysis Shicheng Chen,Steven Pham,Nicolas Terrapon,Jochen Blom,Edward Walker Microorganisms, 2024, 12 (6), pp.1079. ⟨10.3390/microorganisms12061079⟩ Article dans une revue hal-04690689v1
Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition Hao-Wei Chang,Evan Lee,Yi Wang,Cyrus Zhou,Kali Prusset al. Nature Microbiology, 2024, 9 (4), pp.922-937. ⟨10.1038/s41564-024-01628-7⟩ Article dans une revue hal-04579760v1
Two newly established and mutually related subfamilies GH13_48 and GH13_49 of the α-amylase family GH13 Filip Mareček,Nicolas Terrapon,Štefan Janeček Applied Microbiology and Biotechnology, 2024, 108 (1), pp.415. ⟨10.1007/s00253-024-13251-x⟩ Article dans une revue hal-04690683v1
Unveiling the role of novel carbohydrate‐binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms Marie-Katherin Zühlke,Elizabeth Ficko-Blean,Daniel Bartosik,Nicolas Terrapon,Alexandra Jeudyet al. Environmental Microbiology, 2024, 26 (5), pp.e16624. ⟨10.1111/1462-2920.16624⟩ Article dans une revue hal-04579759v1
Ruminococcus torques is a keystone degrader of intestinal mucin glycoprotein, releasing oligosaccharides used by Bacteroides thetaiotaomicron Sadie Schaus,Gabriel Vasconcelos Pereira,Ana Luis,Emily Madlambayan,Nicolas Terraponet al. mBio, 2024, 15 (8), pp.e0003924. ⟨10.1128/mbio.00039-24⟩ Article dans une revue hal-04690680v1
In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides Darryl Wesener,Zachary Beller,Megan Hill,Han Yuan,David Belangeret al. Nature Chemical Biology, 2024, ⟨10.1038/s41589-024-01763-6⟩ Article dans une revue hal-04911123v1
Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history Lisa Mazéas,Ahlem Bouguerba-Collin,J. Mark Cock,France Denoeud,Olivier Godfroyet al. BMC Genomics, 2024, 25 (1), pp.950. ⟨10.1186/s12864-024-10811-3⟩ Article dans une revue hal-04734202v1
Inducible CRISPR-targeted “knockdown” of human gut Bacteroides in gnotobiotic mice discloses glycan utilization strategies Zachary Beller,Darryl Wesener,Timothy Seebeck,Janaki Guruge,Alexandra Byrneet al. Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (39), pp.e2311422120. ⟨10.1073/pnas.2311422120⟩ Article dans une revue hal-04472785v1
Bioactive glycans in a microbiome-directed food for children with malnutrition Matthew Hibberd,Daniel Webber,Dmitry Rodionov,Suzanne Henrissat,Robert Chenet al. Nature, 2023, 625 (7993), pp.157-165. ⟨10.1038/s41586-023-06838-3⟩ Article dans une revue hal-04472779v1
A subfamily classification to choreograph the diverse activities within glycoside hydrolase family 31 Thimali Arumapperuma,Jinling Li,Bastian Hornung,Niccolay Madiedo Soler,Ethan Goddard-Borgeret al. Journal of Biological Chemistry, 2023, 299 (4), pp.103038. ⟨10.1016/j.jbc.2023.103038⟩ Article dans une revue hal-04070174v1
BoGH13ASus from Bacteroides ovatus represents a novel α-amylase used for Bacteroides starch breakdown in the human gut Haley Brown,Anna Deveaux,Brock Juliano,Amanda Photenhauer,Matthieu Boulinguiezet al. Cellular and Molecular Life Sciences, 2023, 80 (8), pp.232. ⟨10.1007/s00018-023-04812-w⟩ Article dans une revue hal-04461076v1
Taxonomic composition and carbohydrate-active enzyme content in microbial enrichments from pulp mill anaerobic granules after cultivation on lignocellulosic substrates Mabel T Wong,Camilla L Nesbø,Weijun Wang,Marie Couturier,Vincent Lombardet al. Frontiers in Microbiomes, 2023, 2, pp.1094865. ⟨10.3389/frmbi.2023.1094865⟩ Article dans une revue (data paper) hal-04681775v1
Hadza Prevotella require diet-derived microbiota-accessible carbohydrates to persist in mice Rebecca Gellman,Matthew Olm,Nicolas Terrapon,Fatima Enam,Steven Higginbottomet al. Cell Reports, 2023, 42 (11), pp.113233. ⟨10.1016/j.celrep.2023.113233⟩ Article dans une revue hal-04461077v1
An objective criterion to evaluate sequence-similarity networks helps in dividing the protein family sequence space Bastian Volker Helmut Hornung,Nicolas Terrapon PLoS Computational Biology, 2023, 19 (8), pp.e1010881. ⟨10.1371/journal.pcbi.1010881⟩ Article dans une revue hal-04461074v1
Functional exploration of the glycoside hydrolase family GH113 Marie Couturier,Mélanie Touvrey-Loiodice,Nicolas Terrapon,Elodie Drula,Laurine Buonet al. PLoS ONE, 2022, 17 (4), pp.1-14. ⟨10.1371/journal.pone.0267509⟩ Article dans une revue hal-03656671v1
Phenotypic and Genomic Diversification in Complex Carbohydrate-Degrading Human Gut Bacteria Nicholas Pudlo,Karthik Urs,Ryan Crawford,Ali Pirani,Todd Atherlyet al. mSystems, 2022, 7 (1), pp.e0094721. ⟨10.1128/msystems.00947-21⟩ Article dans une revue hal-03589021v1
Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans Marcele Martins,Mariana Morais,Gabriela Persinoti,Rafael Galinari,Li Yuet al. Acta crystallographica Section D : Structural biology [1993-..], 2022, 78 (11), pp.1358-1372. ⟨10.1107/S2059798322009561⟩ Article dans une revue hal-03982004v1
Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides Lucelia Cabral,Gabriela Persinoti,Douglas Paixão,Marcele Martins,Mariana Moraiset al. Nature Communications, 2022, 13 (1), pp.629. ⟨10.1038/s41467-022-28310-y⟩ Article dans une revue hal-03589026v1
Assembly and synthesis of the extracellular matrix in brown algae Lisa Mazéas,Rina Yonamine,Tristan Barbeyron,Bernard Henrissat,Elodie Drulaet al. Seminars in Cell and Developmental Biology, In press, 134, pp.112-124. ⟨10.1016/j.semcdb.2022.03.005⟩ Article dans une revue hal-03627114v1
Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans Nathan Han,Jiye Cheng,Omar Delannoy-Bruno,Daniel Webber,Nicolas Terraponet al. Cell, 2022, 185 (16), pp.3056-3057. ⟨10.1016/j.cell.2022.07.007⟩ Article dans une revue hal-03821289v1
The carbohydrate-active enzyme database: functions and literature Elodie Drula,Marie-Line Garron,Suzan Dogan,Vincent Lombard,Bernard Henrissatet al. Nucleic Acids Research, 2022, 50 (D1), pp.D571-D577. ⟨10.1093/nar/gkab1045⟩ Article dans une revue hal-03588994v1
Bioinformatic Analysis of Lytic Polysaccharide Monooxygenases Reveals the Pan-Families Occurrence of Intrinsically Disordered C-Terminal Extensions Ketty C Tamburrini,Nicolas Terrapon,Vincent Lombard,Bastien Bissaro,Sonia Longhiet al. Biomolecules, 2021, 11 (11), pp.1632. ⟨10.3390/biom11111632⟩ Article dans une revue hal-03431539v1
Strain-level functional variation in the human gut microbiota based on bacterial binding to artificial food particles Michael Patnode,Janaki Guruge,Juan Castillo,Garret Couture,Vincent Lombardet al. Cell Host & Microbe, 2021, 29 (4), pp.664-673.e5. ⟨10.1016/j.chom.2021.01.007⟩ Article dans une revue hal-03354016v1
Polysaccharide utilization loci-driven enzyme discovery reveals BD-FAE: a bifunctional feruloyl and acetyl xylan esterase active on complex natural xylans Lisanne Hameleers,Leena Penttinen,Martina Ikonen,Léa Jaillot,Régis Fauréet al. Biotechnology for Biofuels, 2021, 14 (1), ⟨10.1186/s13068-021-01976-0⟩ Article dans une revue hal-03270620v1
Genome Features of Asaia sp. W12 Isolated from the Mosquito Anopheles stephensi Reveal Symbiotic Traits Shicheng Chen,Ting Yu,Nicolas Terrapon,Bernard Henrissat,Edward D Walker Genes, 2021, 12 (5), pp.752. ⟨10.3390/genes12050752⟩ Article dans une revue hal-03279784v1
Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut Leszek Michalak,John Christian Gaby,Leidy Lagos,Sabina Leanti La Rosa,Torgeir Hvidstenet al. Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-19585-0⟩ Article dans une revue hal-03163522v1
Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus Didier Ndeh,Arnaud Baslé,Henrik Strahl,Urszula Mcclurgg,Bernard Henrissatet al. Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-14509-4⟩ Article dans une revue hal-03162776v1
Analysis of the diversity of the glycoside hydrolase family 130 in mammal gut microbiomes reveals a novel mannoside-phosphorylase function Ao Li,Elisabeth Laville,Laurence Tarquis,Vincent Lombard,David Ropartzet al. Microbial Genomics, 2020, 6 (10), pp.1-14. ⟨10.1099/mgen.0.000404⟩ Article dans une revue hal-02949655v1
Investigating host-microbiome interactions by droplet based microfluidics Alexandra S Tauzin,Mariana Rangel Pereira,Liisa D van Vliet,Pierre-Yves Colin,Elisabeth Lavilleet al. Microbiome, 2020, 8 (1), ⟨10.1186/s40168-020-00911-z⟩ Article dans une revue hal-02961383v1
A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment Junhua Li,Huanzi Zhong,Yuliaxis Y. Ramayo-Caldas,Nicolas Terrapon,Vincent Lombardet al. GigaScience, 2020, 9 (6), pp.1-15. ⟨10.1093/gigascience/giaa057⟩ Article dans une revue hal-02860679v1
Harvesting of Prebiotic Fructooligosaccharides by Nonbeneficial Human Gut Bacteria Zhi Wang,Alexandra S. Tauzin,Elisabeth Laville,Pietro Tedesco,Fabien Letisseet al. mSphere, 2020, 5 (1), 26 p. ⟨10.1128/mSphere.00771-19⟩ Article dans une revue hal-02478442v1
Isolation and Characterization of Extracellular Vesicles Secreted In Vitro by Porcine Microbiota Leidy Lagos,Sabina Leanti La Rosa,Magnus Ø. Arntzen,Ragnhild Ånestad,Nicolas Terraponet al. Microorganisms, 2020, 8 (7), pp.983. ⟨10.3390/microorganisms8070983⟩ Article dans une revue hal-03162747v1
Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space William Helbert,Laurent Poulet,Sophie Drouillard,Sophie Mathieu,Mélanie Loiodiceet al. Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (13), pp.6063-6068. ⟨10.1073/pnas.1815791116⟩ Article dans une revue hal-02108378v1
Bacteroidetes use thousands of enzyme combinations to break down glycans Pascal Lapébie,Vincent Lombard,Elodie Drula,Nicolas Terrapon,Bernard Henrissat Nature Communications, 2019, 10 (2043), pp.1. ⟨10.1038/s41467-019-10068-5⟩ Article dans une revue hal-02588181v1
A subfamily roadmap for functional glycogenomics of the evolutionarily diverse Glycoside Hydrolase Family 16 (GH16) Alexander Holm Viborg,Nicolas Terrapon,Vincent Lombard,Gurvan Michel,Mirjam Czjzeket al. Journal of Biological Chemistry, In press, 294 (44), pp.15973 - 15986. ⟨10.1074/jbc.RA119.010619⟩ Article dans une revue hal-02291008v2
Comparative genomic analyses reveal diverse virulence factors and antimicrobial resistance mechanisms in clinical Elizabethkingia meningoseptica strains Jochen Blom,Nicolas Terrapon,Shicheng Chen,Marty Soehnlen,Jochen Blom Idet al. PLoS ONE, 2019, 14 (10), pp.e0222648. ⟨10.1371/journal.pone.0222648⟩ Article dans une revue hal-02972534v1
Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans Michael Patnode,Zachary Beller,Nathan Han,Jiye Cheng,Samantha Peterset al. Cell, 2019, 179 (1), pp.59-73.e13. ⟨10.1016/j.cell.2019.08.011⟩ Article dans une revue hal-02588032v1
Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides Ana R Luis,Jonathon Briggs,Xiaoyang Zhang,Benjamin Farnell,Didier Ndehet al. Nature Microbiology, 2018, 3 (2), pp.210-219. ⟨10.1038/s41564-017-0079-1⟩ Article dans une revue hal-02094616v1
PULDB: the expanded database of Polysaccharide Utilization Loci Nicolas Terrapon,Vincent Lombard,Elodie Drula,Pascal Lapébie,Saad Al-Masaudiet al. Nucleic Acids Research, 2018, 46 (D1), pp.D677-D683. ⟨10.1093/nar/gkx1022⟩ Article dans une revue hal-02094620v1
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection Rekha Seshadri,Sinead Leahy,Graeme Attwood,Koon Hoong Teh,Suzanne Lambieet al. Nature Biotechnology, 2018, 36 (4), pp.359-367. ⟨10.1038/nbt.4110⟩ Article dans une revue hal-02094598v1
A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation Alan Cartmell,Li Muñoz-Muñoz,Jonathon Briggs,Didier Ndeh,Elisabeth Loweet al. Nature Microbiology, 2018, 3 (11), pp.1314-1326. ⟨10.1038/s41564-018-0258-8⟩ Article dans une revue hal-02094506v1
A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic Orlane Patrascu,Fabienne Beguet-Crespel,Ludovica Marinelli,Emmanuelle Le Chatelier,Anne-Laure Abrahamet al. Scientific Reports, 2017, 7, ⟨10.1038/srep40248⟩ Article dans une revue hal-01606551v1
A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9 Nicolas Lenfant,Matthieu Hainaut,Nicolas Terrapon,Elodie Drula,Vincent Lombardet al. Carbohydrate Research, 2017, 448, pp.166-174. ⟨10.1016/j.carres.2017.04.012⟩ Article dans une revue hal-01595066v1
Unusual active site location and catalytic apparatus in a glycoside hydrolase family Jose Munoz-Munoz,Alan Cartmell,Nicolas Terrapon,Bernard Henrissat,Harry J. Gilbert Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (19), pp.4936-4941. ⟨10.1073/pnas.1701130114⟩ Article dans une revue hal-01607615v1
An evolutionarily distinct family of polysaccharide lyases removes rhamnose capping of complex arabinogalactan proteins Jose Munoz-Munoz,Alan Cartmell,Nicolas Terrapon,Arnaud Basle,Bernard Henrissatet al. Journal of Biological Chemistry, 2017, 292 (32), pp.13271 - 13283. ⟨10.1074/jbc.M117.794578⟩ Article dans une revue hal-01606932v1
Complex pectin metabolism by gut bacteria reveals novel catalytic functions Didier Ndeh,Artur Rogowski,Alan Cartmell,Ana S. Luis,Arnaud Basleet al. Nature, 2017, 544 (7648), pp.65 - +. ⟨10.1038/nature21725⟩ Article dans une revue hal-01595600v1
Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment Mabel Wong,Weijun Wang,Marie Couturier,Fakhria Razeq,Vincent Lombardet al. Frontiers in Microbiology, 2017, 8, pp.2504. ⟨10.3389/fmicb.2017.02504⟩ Article dans une revue hal-01802956v1
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation Olov Svartström,Johannes Alneberg,Nicolas Terrapon,Vincent Lombard,Ino de Bruijnet al. The International Society of Microbiologial Ecology Journal, 2017, 11 (11), pp.2538-2551. ⟨10.1038/ismej.2017.108⟩ Article dans une revue hal-02328246v1
How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans Alan Cartmell,Elisabeth Lowe,Arnaud Basle,Susan Firbank,Didier Ndehet al. Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (27), pp.7037-7042. ⟨10.1073/pnas.1704367114⟩ Article dans une revue hal-01802836v1
Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis Jordane Despres,Evelyne Forano,Pascale Lepercq,Sophie Comtet-Marre,Grégory Jubelinet al. BMC Genomics, 2016, 17 (1), pp.147. ⟨10.1186/s12864-016-2472-1⟩ Article dans une revue hal-01439085v1
Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level Jordane Despres,Evelyne Forano,Pascale Lepercq,Sophie Comtet-Marre,Grégory Jubelinet al. BMC Genomics, 2016, 17 (1), ⟨10.1186/s12864-016-2680-8⟩ Article dans une revue hal-01439065v1
A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility Mahesh S. Desai,Anna M. Seekatz,Nicole M. Koropatkin,Nobuhiko Kamada,Christina A. Hickeyet al. Cell, 2016, 167 (5), pp.1339-1353. ⟨10.1016/j.cell.2016.10.043⟩ Article dans une revue hal-01439105v1
Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis Jordane Despres,Evelyne Forano,Pascale Lepercq,Sophie Comtet-Marre,Grégory Jubelinet al. BMC Genomics, 2016, 27 (17), ⟨10.1186/s12864-016-2758-3⟩ Article dans une revue hal-01439068v1
Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides Meng Wu,Nathan P. Mcnulty,Dmitry A. Rodionov,Matvei S. Khoroshkin,Nicholas W. Griffinet al. Science, 2015, 350 (6256), ⟨10.1126/science.aac5992⟩ Article dans une revue hal-01439023v1
Glycan complexity dictates microbial resource allocation in the large intestine Artur Rogowski,Jonathon A. Briggs,Jennifer C. Mortimer,Theodora Tryfona,Nicolas Terraponet al. Nature Communications, 2015, 6, ⟨10.1038/ncomms8481⟩ Article dans une revue hal-01439017v1
Automatic prediction of polysaccharide utilization loci in Bacteroidetes species Nicolas Terrapon,Vincent Lombard,Harry J. Gilbert,Bernard Henrissat Bioinformatics, 2015, 31 (5), pp.647-655. ⟨10.1093/bioinformatics/btu716⟩ Article dans une revue hal-01438994v1
Identification of divergent protein domains by combining HMM-HMM comparisons and co-occurrence detection Amel Ghouila,Isabelle Florent,Fatma Zahra Guerfali,Nicolas Terrapon,Dhafer Laouiniet al. PLoS ONE, 2014, 9 (6), pp.e95275. ⟨10.1371/journal.pone.0095275⟩ Article dans une revue pasteur-01060276v1
How do gut microbes break down dietary fiber? Nicolas Terrapon,Bernard Henrissat Trends in Biochemical Sciences, 2014, 39 (4), pp.156-158. ⟨10.1016/j.tibs.2014.02.005⟩ Article dans une revue istex hal-05042026v1
Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum. Nicolas Terrapon,Olivier Gascuel,Eric Marechal,Laurent Brehelin BMC Bioinformatics, 2012, 13 (1), pp.67. ⟨10.1186/1471-2105-13-67⟩ Article dans une revue hal-00701611v1
EuPathDomains: The Divergent Domain Database for Eukaryotic Pathogens Amel Ghouila,Nicolas Terrapon,Olivier Gascuel,Fatma Guerfali,Dhafer Laouiniet al. Infection, Genetics and Evolution, 2011, 11 (4), pp.698-707. ⟨10.1016/j.meegid.2010.09.008⟩ Article dans une revue istex lirmm-00540932v1
Detection of new protein domains using co-occurrence: application to Plasmodium falciparum Nicolas Terrapon,Olivier Gascuel,Eric Maréchal,Laurent Brehelin Bioinformatics, 2009, 25, pp.3077-83. ⟨10.1093/bioinformatics/btp560⟩ Article dans une revue lirmm-00431171v1

Communication dans un congrès (4)

Approches non conventionnelles de production du L-Rhamnose par bioconversion Elodie Peghaire,Thomas Flahaut,Gwendoline Christophe,Pascal Dubessay,Alina-Violeta Ursuet al. Polymerix 2024, 8ème édition, Jun 2024, Rennes, France Communication dans un congrès hal-04874024v1
Functional metagenomics for sweet dreams Gabrielle Potocki-Veronese,Sophie Lajus,Laurence Tarquis,Simon Ladevèze,Julien Durandet al. 6th International Conference on Functional Metagenomics, Jun 2024, Skukuza, South Africa Communication dans un congrès hal-04779504v1
Fitting Hidden Markov Models of Protein Domains to a Target Species Nicolas Terrapon,Olivier Gascuel,Laurent Brehelin JOBIM 2011 - 12es Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2011, Paris, France. pp.193-194 Communication dans un congrès lirmm-00725501v1
Détection de nouveaux domaines protéiques par co-occurence : Application à P. falciparum Nicolas Terrapon,Olivier Gascuel,Laurent Brehelin JOBIM 2009 - 10es Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2009, Nantes, France. pp.43-48 Communication dans un congrès lirmm-00414954v1

Autre publication scientifique (1)

Functional exploration of in vivo and in vitro lignocellulose-fed rumen bacterial microbiomes reveals novel enzymes involved in polysaccharide breakdown Lisa Ufarte,Elisabeth Laville,Adele Lazuka,Sophie Lajus,Emna Bouhajjaet al. 2024, ⟨10.1101/2024.03.15.585145⟩ Autre publication scientifique hal-04782262v1

Poster de conférence (1)

Production d’exopolysaccharides à haute teneur en rhamnose Elodie Peghaire,Thomas Flahaut,Juliette Defour,Gwendoline Christophe,Pascal Dubessayet al. Polymerix 2024, Jun 2024, Rennes, France Poster de conférence hal-04894713v1

Pré-publication, Document de travail (2)

Novel laminarin-binding CBMs in multimodular proteins of marine Bacteroidota feature prominently in phytoplankton blooms Marie-Katherin Zühlke,Elizabeth Ficko-Blean,Daniel Bartosik,Nicolas Terrapon,Alexandra Jeudyet al. 2023 Pré-publication, Document de travail hal-04260572v1
Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota Matthew Ostrowski,Sabina Leanti La Rosa,Benoit Kunath,Andrew Robertson,Gabriel Pereiraet al. 2024 Pré-publication, Document de travail hal-03666905v1

Chapitre d'ouvrage (1)

The CAZy Database/the Carbohydrate-Active Enzyme (CAZy) Database: Principles and Usage Guidelines Nicolas Terrapon,Vincent Lombard,Elodie Drula,Pedro Coutinho,Bernard Henrissat A Practical Guide to Using Glycomics Databases, Springer Japan, pp.117-131, 2017, ⟨10.1007/978-4-431-56454-6_6⟩ Chapitre d'ouvrage hal-03508817v1

Thèse (1)

Recherche de domaines protéiques divergents à l'aide de modèles de Markov cachés : application à Plasmodium falciparum Nicolas Terrapon Bio-informatique [q-bio.QM]. Université Montpellier II - Sciences et Techniques du Languedoc, 2010. Français. ⟨NNT : ⟩ Thèse tel-00811835v1