Stoll Stoll

Publications

Article dans une revue (32)

Neutralization of acyl-CoA-binding protein attenuates glucocorticoid-mediated suppression of cancer immunosurveillance Hui Pan,Liwei Zh,Peng Liu,Ziqi Jin,Eléonore Piardet al. Proceedings of the National Academy of Sciences of the United States of America, 2026, ⟨10.1073/pnas.2518983123⟩ Article dans une revue (data paper) hal-05584244v1
Neutralization of acyl CoA binding protein (ACBP) for the experimental treatment of osteoarthritis Uxía Nogueira-Recalde,Flavia Lambertucci,Léa Montégut,Omar Motiño,Hui Chenet al. Cell Death and Differentiation, 2025, 32, pp.1484 - 1498. ⟨10.1038/s41418-025-01474-y⟩ Article dans une revue hal-05210858v1
Acyl-CoA binding protein for the experimental treatment of anorexia Hui Chen,Stéphanie Moriceau,Adrien Joseph,Francois Mailliet,Sijing Liet al. Science Translational Medicine, 2024, 16 (760), pp.eadl0715. ⟨10.1126/scitranslmed.adl0715⟩ Article dans une revue (article de synthèse) inserm-04688446v1
Lysosomal damage due to cholesterol accumulation triggers immunogenic cell death Karla Alvarez-Valadez,Allan Sauvat,Julien Diharce,Marion Leduc,Gautier Stollet al. Autophagy, 2024, 08, pp.1-23. ⟨10.1080/15548627.2024.2440842⟩ Article dans une revue hal-04875040v1
UPMaBoSS: A Novel Framework for Dynamic Cell Population Modeling Gautier Stoll,Aurélien Naldi,Vincent Noël,Eric Viara,Emmanuel Barillotet al. Frontiers in Molecular Biosciences, 2022, 9, ⟨10.3389/fmolb.2022.800152⟩ Article dans une revue hal-03696031v1
Metabolic features of cancer cells impact immunosurveillance Adrien Joseph,Pan Juncheng,Michele Mondini,Nizar Labaied,Mauro Loiet al. Journal for Immunotherapy of Cancer, 2021, 9 (6), pp.e002362. ⟨10.1136/jitc-2021-002362⟩ Article dans une revue hal-03272265v1
Setting the basis of best practices and standards for curation and annotation of logical models in biology—highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop Anna Niarakis,Martin Kuiper,Marek Ostaszewski,Rahuman Malik Sheriff,Cristina Casals-Casaset al. Briefings in Bioinformatics, 2021, 22 (2), pp.1848--1859. ⟨10.1093/bib/bbaa046⟩ Article dans une revue hal-02549796v1
WebMaBoSS: A Web Interface for Simulating Boolean Models Stochastically Vincent Noël,Marco Ruscone,Gautier Stoll,Eric Viara,Andrei Zinovyevet al. Frontiers in Molecular Biosciences, 2021, 8, ⟨10.3389/fmolb.2021.754444⟩ Article dans une revue hal-03479335v1
Paradoxical implication of BAX/BAK in the persistence of tetraploid cells Jiayin Deng,Lucía G Gutiérrez,Gautier Stoll,Omar Motiño,Isabelle Martinset al. Cell Death and Disease, 2021, 12 (11), pp.1039. ⟨10.1038/s41419-021-04321-3⟩ Article dans une revue hal-03424980v1
Autoimmunity affecting the biliary tract fuels the immunosurveillance of cholangiocarcinoma Juliette Paillet,Céleste Plantureux,Sarah Lévesque,Julie Le Naour,Gautier Stollet al. Journal of Experimental Medicine, 2021, 218 (10), pp.1-33. ⟨10.1084/jem.20200853⟩ Article dans une revue hal-03378827v1
A TLR3 Ligand Reestablishes Chemotherapeutic Responses in the Context of FPR1 Deficiency Julie Le Naour,Peng Liu,Liwei Zhao,Sandy Adjemian,Zsofia Sztupinszkiet al. Cancer Discovery, 2021, 11 (2), pp.408-423. ⟨10.1158/2159-8290.cd-20-0465⟩ Article dans une revue hal-03682026v1
Dynamical Boolean Modeling of Immunogenic Cell Death Andrea Checcoli,Jonathan Pol,Aurelien Naldi,Vincent Noël,Emmanuel Barillotet al. Frontiers in Physiology, 2020, 11, pp.590479. ⟨10.3389/fphys.2020.590479⟩ Article dans une revue hal-03050475v1
Immunoprophylactic and immunotherapeutic control of hormone receptor-positive breast cancer Aitziber Buqué,Norma Bloy,Maria Perez-Lanzón,Kristina Iribarren,Juliette Humeauet al. Nature Communications, 2020, 11, pp.3819. ⟨10.1038/s41467-020-17644-0⟩ Article dans une revue hal-03994636v1
The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome Fatima Domenica Elisa de Palma,Valentina del Monaco,Jonathan Pol,Margerie Kremer,Valeria D’argenioet al. Pharmacological Research, 2020, 161, pp.105249. ⟨10.1016/j.phrs.2020.105249⟩ Article dans une revue hal-03351350v1
Publisher Correction: Immunoprophylactic and immunotherapeutic control of hormone receptor-positive breast cancer Aitziber Buqué,Norma Bloy,Maria Perez-Lanzón,Kristina Iribarren,Juliette Humeauet al. Nature Communications, 2020, 11 (1), pp.4787. ⟨10.1038/s41467-020-18719-8⟩ Article dans une revue hal-03994694v1
A synergistic triad of chemotherapy, immune checkpoint inhibitors, and caloric restriction mimetics eradicates tumors in mice Sarah Levesque,Julie Le Naour,Federico Pietrocola,Juliette Paillet,Margerie Kremeret al. OncoImmunology, 2019, 8 (11), pp.e1657375. ⟨10.1080/2162402X.2019.1657375⟩ Article dans une revue hal-02297833v1
AIF-regulated oxidative phosphorylation supports lung cancer development Shuan Rao,Laura Mondragón,Blanka Pranjic,Toshikatsu Hanada,Gautier Stollet al. Cell Research, 2019, 29 (7), pp.579-591. ⟨10.1038/s41422-019-0181-4⟩ Article dans une revue hal-02355955v1
Contribution of annexin A1 to anticancer immunosurveillance Elisa Elena Baracco,Gautier Stoll,Peter van Endert,Laurence Zitvogel,Erika Vacchelliet al. OncoImmunology, 2019, 8 (11), pp.e1647760. ⟨10.1080/2162402X.2019.1647760⟩ Article dans une revue hal-04702734v1
Metabolic enzymes expressed by cancer cells impact the immune infiltrate Gautier Stoll,Margerie Kremer,Normal Bloy,Adrien Joseph,Maria Castedoet al. OncoImmunology, 2019, 8 (6), pp.e1571389. ⟨10.1080/2162402X.2019.1571389⟩ Article dans une revue hal-02461563v1
Sustained Type I interferon signaling as a mechanism of resistance to PD-1 blockade Nicolas Jacquelot,Takahiro Yamazaki,Maria Roberti,Connie Duong,Miles Andrewset al. Cell Research, 2019, 29 (10), pp.846-861. ⟨10.1038/s41422-019-0224-x⟩ Article dans une revue hal-02461559v1
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks Aurélien Naldi,Céline Hernandez,Nicolas Levy,Gautier Stoll,Pedro Monteiroet al. Frontiers in Physiology, 2018, 9, pp.n°680:1-13. ⟨10.3389/fphys.2018.00680⟩ Article dans une revue hal-01794294v2
Prediction of Mutations to Control Pathways Enabling Tumour Cell Invasion with the CoLoMoTo Interactive Notebook (Tutorial) Nicolas Levy,Aurélien Naldi,Céline Hernandez,Gautier Stoll,Denis Thieffryet al. Frontiers in Physiology, 2018, 9, pp.787. ⟨10.1101/319780⟩ Article dans une revue hal-01809081v1
Evaluation of autophagy inducers in epithelial cells carrying the ΔF508 mutation of the cystic fibrosis transmembrane conductance regulator CFTR Shaoyi Zhang,Gautier Stoll,José Manuel Bravo San Pedro,Valentina Sica,Allan Sauvatet al. Cell Death and Disease, 2018, 9, pp.191. ⟨10.1038/s41419-017-0235-9⟩ Article dans une revue hal-01757232v1
TNFR2/BIRC3-TRAF1 signaling pathway as a novel NK cell immune checkpoint in cancer Alexandre Ivagnès,Meriem Messaoudene,Gautier Stoll,Bertrand Routy,Aurélie Fluckigeret al. OncoImmunology, 2018, 7 (12), pp.e1386826. ⟨10.1080/2162402X.2017.1386826⟩ Article dans une revue hal-03994406v1
A comprehensive approach to the molecular determinants of lifespan using a Boolean model of geroconversion Loic Verlingue,Aurélien Dugourd,Gautier Stoll,Emmanuel Barillot,Laurence Calzoneet al. Aging Cell, 2016, 15 (6), pp.1018-1026. ⟨10.1111/acel.12504⟩ Article dans une revue hal-01366791v1
CCL2/CCR2-Dependent Recruitment of Functional Antigen-Presenting Cells into Tumors upon Chemotherapy Yuting Ma,Stephen R Mattarollo,Sandy Adjemian,Heng Yang,Laetitia Aymericet al. Cancer Research, 2014, 74 (2), pp.436-445. ⟨10.1158/0008-5472.can-13-1265⟩ Article dans une revue hal-02047410v1
Systems biology of Ewing sarcoma: a network model of EWS-FLI1 effect on proliferation and apoptosis Gautier Stoll,Didier Surdez,Franck Tirode,Karine Laud,Emmanuel Barillotet al. Nucleic Acids Research, 2013, 41 (19), pp.8853-8871. ⟨10.1093/nar/gkt678⟩ Article dans une revue inserm-02438745v1
BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats. Eric Bonnet,Laurence Calzone,Daniel Rovera,Gautier Stoll,Emmanuel Barillotet al. BMC Systems Biology, 2013, 7 (1), pp.18. ⟨10.1186/1752-0509-7-18⟩ Article dans une revue inserm-00820930v1
Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm. Gautier Stoll,Eric Viara,Emmanuel Barillot,Laurence Calzone BMC Systems Biology, 2012, 6 (1), pp.116. ⟨10.1186/1752-0509-6-116⟩ Article dans une revue inserm-00762304v1
A Probabilistic Model for Cell Population Phenotyping Using HCS Data Edouard Pauwels,Didier Surdez,Gautier Stoll,Aurianne Lescure,Elaine del Neryet al. PLoS ONE, 2012, 7 (8), pp.e42715. ⟨10.1371/journal.pone.0042715⟩ Article dans une revue hal-03116921v1
Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling. Carito Guziolowski,Sylvain Blachon,Tatiana Baumuratova,Gautier Stoll,Ovidiu Radulescuet al. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011, 8 (5), pp.1223-1234. ⟨10.1109/TCBB.2010.71⟩ Article dans une revue inria-00538134v1
Localizing potentially active post-transcriptional regulations in the Ewing's sarcoma gene regulatory network. Tatiana Baumuratova,Didier Surdez,Bernard Delyon,Gautier Stoll,Olivier Delattreet al. BMC Systems Biology, 2010, 4 (1), pp.146. ⟨10.1186/1752-0509-4-146⟩ Article dans une revue inserm-00984711v1

Communication dans un congrès (1)

Method for Relating Inter-patient Gene Copy Numbers Variations with Gene Expression via Gene Influence Networks Sylvain Blachon,Gautier Stoll,Carito Guziolowski,Andrei Zinovyev,Emmanuel Barillotet al. AIAI 2009 Workshop -- Workshop on Biomedical Informatics and Intelligent Approaches in the Support of Genomic Medicine (BMIINT), Apr 2009, Thessalonik, Greece. pp.72-87 Communication dans un congrès inria-00429801v1