Gisele Bronner

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Publications

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A multi-omic resource for exploring microbial eukaryotes in the meromictic freshwater Lake Pavin

Damien Courtine , Cécile Lepère , Ivan Wawrzyniak , Anne Moné , Hermine Billard et al.

Scientific Data , In press, Metagenomics in marine and terrestrial aquatic environments, ⟨10.1038/s41597-026-06573-0⟩

Article dans une revue hal-05477144v1
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Major Intrinsic Proteins in Fungi: A Special Emphasis on the XIP Subfamily

Jean-Stéphane Venisse , Gisèle Bronner , Mouadh Saadaoui , Patricia Roeckel-Drevet , Mohamed Faize et al.

Journal of Fungi, 2025, 11 (7), pp.543. ⟨10.3390/jof11070543⟩

Article dans une revue hal-05251545v1
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Occurrence and Seasonal Dynamics of ALNs in Freshwater Lakes Are Influenced by Their Biological Environment

Maxime Fuster , Hermine Billard , Gisèle Bronner , Télesphore Sime-Ngando , Jonathan Colombet

Microbial ecology, In press, ⟨10.1007/s00248-022-01974-1⟩

Article dans une revue hal-03936443v1
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Functional diversity of microbial eukaryotes in a meromictic lake: Coupling between metatranscriptomic and a trait‐based approach

Arthur Monjot , Gisèle Bronner , Damien Courtine , Corinne Cruaud , Corinne da Silva et al.

Environmental Microbiology, In press, ⟨10.1111/1462-2920.16531⟩

Article dans une revue hal-04273967v1
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FreshOmics : A manually curated and standardized –omics database for investigating freshwater microbiomes

Corinne Biderre-Petit , Jean‐christophe Charvy , Gisèle Bronner , Marina Chauvet , Didier Debroas et al.

Molecular Ecology Resources, 2022, ⟨10.1111/1755-0998.13692⟩

Article dans une revue hal-03768857v1
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A drift‐barrier model drives the genomic landscape of a structured bacterial population

Hélène Gardon , Corinne Biderre‐petit , Isabelle Jouan‐dufournel , Gisèle Bronner

Molecular Ecology, 2020, 29 (21), pp.4143-4156. ⟨10.1111/mec.15628⟩

Article dans une revue hal-03428622v1
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Transient Dynamics of Archaea and Bacteria in Sediments and Brine Across a Salinity Gradient in a Solar Saltern of Goa, India

Kabilan Mani , Najwa Taïb , Mylène Hugoni , Gisèle Bronner , Judith Bragança et al.

Frontiers in Microbiology, 2020, 11, pp.1-19. ⟨10.3389/fmicb.2020.01891⟩

Article dans une revue hal-03015768v1

Freshwater Perkinsea: diversity, ecology and genomic information

M Jobard , I Wawrzyniak , G Bronner , D Marie , A Vellet et al.

Journal of Plankton Research, 2020, 42 (1), pp.3-17. ⟨10.1093/plankt/fbz068⟩

Article dans une revue hal-02997226v1
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MIP diversity from Trichoderma: Structural considerations and transcriptional modulation during mycoparasitic association with Fusarium solani olive trees

Maroua Ben Amira , Robin Mom , David Lopez , Hatem Chaar , Ali Khouaja et al.

PLoS ONE, 2018, 13 (3), pp.23. ⟨10.1371/journal.pone.0193760⟩

Article dans une revue hal-01779754v1

Temporal and spatial variations in the composition of freshwater photosynthetic picoeukaryotes revealed by MiSeq sequencing from flow cytometry sorted samples

Shengnan Li , Gisèle Bronner , Cécile Lepère , Fanxiang Kong , Xiaoli Shi

Environmental Microbiology, 2017, 19 (6), pp.2286 - 2300. ⟨10.1111/1462-2920.13724⟩

Article dans une revue hal-01867890v1
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Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea

Mylène Hugoni , Hélène Agogué , Najwa Taib , Isabelle Domaizon , Anne Moné et al.

Aquatic Microbial Ecology, 2015, 70 (2), pp.473-483. ⟨10.1007/s00248-015-0601-z⟩

Article dans une revue hal-01354835v1

Genetic diversity along the life cycle of the cyanobacterium M icrocystis : highlight on the complexity of benthic and planktonic interactions

Marion Sabart , Benjamin Misson , Marlène M. Jobard , Gisèle Bronner , Florence Donnadieu-Bernard et al.

Environmental Microbiology, 2015, 17 (3), pp.901 - 911. ⟨10.1111/1462-2920.12555⟩

Article dans une revue istex hal-01826039v1
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In silico study of wall-associated kinase family reveals large-scale genomic expansion potentially connected with functional diversification in Populus

Kévin Tocquard , Clément Lafon-Placette , Daniel Auguin , Beatriz Muries Bosch , Gisèle Bronner et al.

Tree Genetics and Genomes, 2014, 10 (5), pp.1135-1147. ⟨10.1007/s11295-014-0748-7⟩

Article dans une revue hal-01114446v2

Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses.

Simon Roux , François Enault , Gisèle Bronner , Daniel Vaulot , Patrick Forterre et al.

Nature Communications, 2013, 4, pp.2700. ⟨10.1038/ncomms3700⟩

Article dans une revue hal-00881062v1
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Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters

Mylène Hugoni , Najwa Taib , Didier Debroas , Isabelle Domaizon , Isabelle Jouan-Dufournel et al.

Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (15), pp.6004-6009. ⟨10.1073/pnas.1216863110⟩

Article dans une revue hal-01354640v1

Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems.

Cécile Lepère , Isabelle Domaizon , Najwa Taïb , Jean-François Mangot , Gisèle Bronner et al.

FEMS Microbiology Ecology, 2013, 85 (1), epub ahead of print. ⟨10.1111/1574-6941.12100⟩

Article dans une revue hal-00806709v1

Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems.

Mylène Hugoni , Sandrine Etien , Antoine Bourges , Cécile Lepère , Isabelle Domaizon et al.

Research in Microbiology, 2013, 164 (4), a compléter. ⟨10.1016/j.resmic.2013.01.004⟩

Article dans une revue hal-00813624v1
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Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity

Najwa Taib , Jean-François Mangot , Isabelle Domaizon , Gisèle Bronner , Didier Debroas

PLoS ONE, 2013, 8 (3), pp.e58950. ⟨10.1371/journal.pone.0058950⟩

Article dans une revue hal-00840867v1
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Positional cloning of a candidate gene for resistance to the sunflower downy mildew, Plasmopara halstedii race 300.

Jérôme Franchel , Mohamed-Fouad M. Bouzidi , Gisèle Bronner , Felicity Vear , Paul Nicolas et al.

TAG Theoretical and Applied Genetics, 2013, 126 (2), pp.359-67. ⟨10.1007/s00122-012-1984-6⟩

Article dans une revue hal-00822169v1
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Insights into Populus XIP aquaporins: evolutionary expansion, protein functionality, and environmental regulation.

David Lopez , Gisèle Bronner , Nicole Brunel , Daniel Auguin , Sylvain Bourgerie et al.

Journal of Experimental Botany, 2012, 63 (5), pp.2217-30. ⟨10.1093/jxb/err404⟩

Article dans une revue hal-00777008v1

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes.

Jean-François Mangot , Isabelle Domaizon , Najwa Taib , Nemr Marouni , Emilie Duffaud et al.

Environmental Microbiology, 2012, 15 (6), epub ahead of print. ⟨10.1111/1462-2920.12065⟩

Article dans une revue istex hal-00821927v1

Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystems.

Simon Roux , François Enault , Gisèle Bronner , Didier Debroas

FEMS Microbiology Ecology, 2011, 78 (3), pp.617-28. ⟨10.1111/j.1574-6941.2011.01190.x⟩

Article dans une revue hal-00840983v1

Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities.

Bushra Parveen , Jean-Philippe Reveilliez , Isabelle Mary , Viviane Ravet , Gisèle Bronner et al.

FEMS Microbiology Ecology, 2011, 77 (3), pp.461-76. ⟨10.1111/j.1574-6941.2011.01130.x⟩

Article dans une revue hal-00841014v1
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Phylogenetic study of plant Q-type C2H2 zinc finger proteins and expression analysis of poplar genes in response to osmotic, cold and mechanical stresses.

Delphine Gourcilleau , Catherine Lenne , Claudia Armenise , Bruno B. Moulia , Jean-Louis J.-L. Julien et al.

DNA Research, 2011, 18 (2), pp.77-92. ⟨10.1093/dnares/dsr001⟩

Article dans une revue hal-00842840v1

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France)

D. Debroas , Jf Humbert , F. Enault , G. Bronner , M. Faubladier et al.

Environmental Microbiology, 2009, 11 (9), pp.2412-2424. ⟨10.1111/j.1462-2920.2009.01969.x⟩

Article dans une revue istex bioemco-00452835v1

Chromosome painting and molecular dating indicate a low rate of chromosomal evolution in golden moles (Mammalia, Chrysochloridae)

C. Gilbert , O?brien Pc , G. Bronner , A. Hassanin , Ferguson-Smith Ma et al.

Chromosome Research, 2006, 14, pp.793-803

Article dans une revue hal-00174515v1

Cartographie génomique comparée chez les mammifères

G. Bronner , B. Spataro , Christian Gautier

Médecine/Sciences, 2002, 18, pp.767-774

Article dans une revue hal-00427250v1

Modeling comparative mapping using objects and associations

G. Bronner , B. Spataro , M. Page , Christian Gautier , F. Rechenmann

Computers and Chemistry, 2002, 26, pp.413-420

Article dans une revue hal-00427216v1

Comparative genomic mapping in mammals

G. Bronner , B. Spataro , Christian Gautier

Médecine/Sciences, 2002, 18, pp.767-774

Article dans une revue hal-00427215v1

Trait-based approach coupled to metatranscriptomic-derived sequence similarity network: towards the depiction of the functional diversity of freshwater microbial eukaryotes

Arthur Monjot , Gisèle Bronner , Damien Courtine , Corinne Cruaud , Corinne Da Silva et al.

16th International Congress of Protistology (ICOP/ISOP — 2025), Jun 2025, Seoul, South Korea

Communication dans un congrès hal-05134808v1
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Réduction génomique et stratégies évolutives en milieu d'eau douce : le cas des Nanopelagicales

Maxime Arque , Gisèle Bronner

AFEM 2025 : 12ème colloque de l'Association Francophone d'Écologie Microbienne, AFEM, Nov 2025, Beaune (21), France

Communication dans un congrès hal-05380128v1

Functional diversity of microbial eukaryotes in a meromictic lake: coupling between metatranscriptomic and a trait-based approach

Arthur Monjot , Gisèle Bronner , Damien Courtine , Corinne Cruaud , Corinne Da Silva et al.

IX European Congress of Protistology & Annual Congress of the International Society of Protistologists, Jul 2023, Vienna, Austria

Communication dans un congrès hal-04795139v1

Perkinsea: what the hell are they doing in freshwater lake ecosystem

Ivan Wawrzyniak , Gisèle Bronner , Arthur Monjot , Marina Chauvet , Agnès Vellet et al.

Conférence Jacques Monod, Sep 2022, Roscoff (FR), France

Communication dans un congrès hal-04793990v1

Métabarcoding et étude de traits, vers une description de la diversité taxonomique et fonctionnelle des eucaryotes unicellulaires dans le lac Pavin

Arthur Monjot , Gisèle Bronner , Damien Courtine , Corinne Cruaud , Corinne Da Silva et al.

Journées Thématiques de l'AFEM, Jun 2022, Clermont-Ferrand, France

Communication dans un congrès hal-04795083v2
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Portage de ePANAM sur la grille de calcul

Trung-Tung Doan , Hong Quang Nguyen , Najwa Taib , Jean-Christophe Charvy , Gisèle Bronner et al.

Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France

Communication dans un congrès hal-00660147v1
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Functional diversity of microbial eukaryotes in a meromictic lake: coupling between metatranscriptomic and a trait-based approach

Arthur Monjot , Gisèle Bronner , Damien Courtine , Corinne Cruaud , Corinne Da Silva et al.

26ème Journées de l’École Doctorale Sciences de la Vie, Santé, Agronomie, Environnement, Jun 2023, Clermont-Ferrand, France

Poster de conférence hal-04795229v1
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Métabarcoding et étude de traits, vers une description de la diversité taxonomique et fonctionnelle des eucaryotes unicellulaires dans le lac Pavin

Arthur Monjot , Gisèle Bronner , Corinne Cruaud , Corinne Da Silva , Jean-Marc Aury et al.

Semaine écologie environnement biodiversité du CNRS, Jun 2022, Clermont-ferrand, France

Poster de conférence hal-04795322v1

Dynamique évolutive des compartiments génomiques chez Prochlorococcus

Hélène Gardon , Corinne Biderre-Petit , Isabelle Jouan-Dufournel , Gisèle Bronner

22ème Journées de l’École Doctorale Sciences de la Vie, Santé, Agronomie, Environnement, Jun 2019, Clermont-Ferrand, France

Poster de conférence hal-04910364v1

Differential patterns of evolutionary dynamics of genomic compartments in co-occurring Prochlorococcus populations

Hélène Gardon , Corinne Biderre-Petit , Isabelle Jouan-Dufournel , Gisèle Bronner

Annual Conference of Society for Molecular Biology and Evolution, Jul 2019, Manchester (UK), United Kingdom

Poster de conférence hal-04910343v1

Insights into Populus XIP aquaporins: Evolutionary expansion, protein functionality, and environmental regulation

David Lopez , Gisèle Bronner , Nicole Brunel-Michac , Daniel Auguin , S. Bourgerie et al.

9ème Congrès national de la SFBV, 2011, Clermont-Ferrand, France

Poster de conférence hal-05063763v1

Study of microorganisms and virus in aquatic ecosystems by metagenetic and metagenomic approaches.

Gisèle Bronner , Didier Debroas , Francois Enault , Mylène Hugoni , Isabelle Jouan-Dufournel et al.

Lake Pavin: History, biogeochemistry and sedimentology of a deep meromictic crater lake, 2016

Chapitre d'ouvrage hal-01623825v1

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in lakes

D. Debroas , F. Enault , Isabelle Jouan-Dufournel , G. Bronner , Jean-François Humbert

Frans J. de Bruijn. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats, Jon Wiley and Sons Publishers, pp.287-293, 2011

Chapitre d'ouvrage bioemco-00640523v1

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in lakes

D. Debroas , F. Enault , I. Jouan-Dufournel , Gisèle Bronner , Jean Francois Humbert

Handbook of molecular microbial ecology II: Metagenomics in different habitats, Wiley-Blackwell, 2011, 978-0-470-64719-6

Chapitre d'ouvrage hal-02806048v1