Helene Rimbert

Publications

Communication dans un congrès (16)

Preliminary Results from the IWGSC Wheat Diversity Project Joshua C Stein,Kevin Fengler,Victor Llaca,Elodie Belmonte,Vincent Pailleret al. PAG 33, Jan 2026, San diego, United States Communication dans un congrès hal-05518160v1
Breed wheat pangenome graph provides access to gene diversity, structural variations and key agronomic loci architecture Pauline Lasserre-Zuber,Djémilatou Ouandaogo,Vincent Pailler,Hélène Rimbert,Pierre Sourdille JOBIM 2025, Société Française de BioInformatique (SFBI),Institut Français de Bioinformatique (IFB),Modélisation et Méthodologie (GDR BIMMM), Jul 2025, Bordeaux, France Communication dans un congrès hal-05194720v1
Exploring wheat diversity with low-pass long-read sequencing Hélène Rimbert,Vincent Pailler,Elodie Belmonte,Véronique Gautier,Benjamin Aubieret al. 3eme colloque INRAE Genomics, INRAE Genomics, Jun 2025, Clermont- Ferrand, France Communication dans un congrès hal-05122908v1
Bread wheat pangenome Graphs Pauline Lasserre-Zuber,Djemila Ouandaogo,Hélène Rimbert,Vincent Pailler l'AG du projet PEPR AgroDiv, Jul 2025, Versailles, France Communication dans un congrès hal-05194387v1
Presence/Absence variation contributes to adaptation, agronomic traits variation and hybrid performances in maize Clément Mabire,Romane Guilbaud,Jorge Duarte,Aude Darracq,Ali Piranniet al. XXVth EUCARPIA Maize and Sorghum Conference – Current challenges and new methods for Maize and Sorghum Breeding, May 2022, Belgrade, Serbia Communication dans un congrès hal-04225603v1
Contribution des Insertion/Délétions à la variations des caractères, l’adaptation et aux performances hybrides au moyen d’une puce de génotypage haut débit Clément Mabire,Jorge Duarte,Johann Joets,Julie B Fiévet,Romane Guilbaudet al. Colloque GIS-BV, Jul 2019, Paris, France Communication dans un congrès hal-02787704v1
Development of a new high throughput 105K Presence/Absence Variation genotyping array for quantitative genetic studies Clément Mabire,Jorge Duarte,Aude Darracq,Ali Pirani,Hélène Rimbertet al. 60. Maize Genetics Conference, Mar 2018, St Malo, France Communication dans un congrès hal-02787197v1
Comparative genomics of two Fusarium graminearum strains of contrasting aggressiveness in bread wheat Francis Fabre,Manon Vignassa,Hélène Rimbert,David Bornaque,Caroline Chebanceet al. 14. European Fusarium Seminar, Apr 2018, Tulln, Austria Communication dans un congrès hal-02293573v1
Design of high-troughput Presence/Absence Variant genotyping array in maize based on Affymetrix Technology Jorge Duarte,Aude Darracq,Hélène Rimbert,Clementine Vitte,Johann Joetset al. Colloque EPGV 2018 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Oct 2018, Evry, France Communication dans un congrès hal-02787234v1
Identifying sequence features impacting recombination in wheat: lessons from chromosome 3B Pierre Sourdille,Benoît Darrier,Frédéric Choulet,François Balfourier,Hélène Rimbertet al. 13. Int. Wheat Genet. Symp, Apr 2017, Tulln, France Communication dans un congrès hal-02340493v1
Overview of Actual and Ancestral Recombination in Relationship with the Sequence in Wheat: Focus on 3B Chromosome Benoît Darrier,Alain Loussert,Hélène Rimbert,Julien Navarro,Frédéric Chouletet al. Plant and Animals Genomics Conference XXIV / Recombination Mechanism Workshop, Jan 2016, San Diego, United States Communication dans un congrès hal-02340468v1
Sequencing and Analysis of Wheat Chromosome 1B Frédéric Choulet,Hélène Rimbert,Ambre-Aurore Josselin,Benoît Darrier,Pierre Sourdilleet al. Plant and Animal Genome XXIV Conference; IWGSC Standards and Protocoles Workshop, Jan 2016, San Diego, United States Communication dans un congrès hal-02306172v1
A new high-throughput approach to characterize Presence/Absence Variant in Maize based on Affymetrix technology Stephane S. Nicolas,Aude Darracq,Ali Pirani,Hélène Rimbert,Clément Mabireet al. Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France Communication dans un congrès hal-02795342v1
Genetic architecture of kernels quality traits in an evolutionary prebreeding population of durum wheat Jacques David,Ingrid Vilmus,Vincent Ranwez,Pierre Roumet,Muriel Tavaudet al. From Seed to Pasta and Beyond: a Sustainable Durum Wheat Chain for Food Security and Healthy Lives. FSTP 2015, May 2015, Milan, Italy Communication dans un congrès hal-02793571v1
Structural variations of the hexaploid wheat chromosome 3B Emeric Dynomant,Hélène Rimbert,Jan Vrána,Marie Kubaláková,Jaroslav Dolezelet al. 9. International Wheat Conference, ICMS Australasia. AUS., Sep 2015, Sydney, Australia. 195 p Communication dans un congrès hal-02740939v1
Characterization of recombination hot spots in bread wheat: Example of chromosome 3B Benoît Darrier,Alain Loussert,Hélène Rimbert,Marie-Claire Debote,Frédéric Chouletet al. Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France Communication dans un congrès hal-01318721v1

Poster de conférence (8)

Preliminary Results from the IWGSC Wheat Diversity Project Joshua C Stein,Catalina Johnson,Victor Llaca,Kevin Fengler,Isabelle Caugantet al. PAG 33, Jan 2026, San Diego, United States Poster de conférence hal-05519131v1
IWGSC 2.0: Wheat Genome Curation for Future Crop Resilience The International Wheat Genome Sequencing Consortium Catalina Johnson,Joshua C Stein,Victor Llaca,Kevin Fengler,Isabelle Caugantet al. PAG32, 2025, San Diego, United States Poster de conférence hal-05519247v1
Construction and analysis of pangenomic graphs in soft wheat from 14 public genomes Djémilatou Ouandaogo,Vincent Pailler,Hélène Rimbert,Pierre Sourdille,Pauline Lasserre-Zuber JOBIM 2025, Jul 2025, Bordeaux, France. , pp.1 Poster de conférence hal-05194677v1
IWGSC 2.0: Implementing the Wheat Diversity Project Joshua C Stein,Victor Llaca,Kevin Fengler,Catalina Johnson,Isabelle Caugantet al. PAG 2024 Australia, Sep 2024, Perth, Australia Poster de conférence hal-04913949v1
Analyse de diversité d'un panel de pré-breeding de blé tendre par une approche transcriptomique Hélène Rimbert,Frédéric Choulet,Odile Argillier,Jérôme Auzanneau,Mark Daveyet al. 9 ème rencontres du FSOV -2024, Apr 2024, Paris, France Poster de conférence hal-04712172v1
Have a break: how to decipher Spo11.2 role in Triticum aestivum? Fatiha Benyahya,Isabelle Nadaud,Ludovic Georges,Alain Loussert,Isabelle Lhommetet al. EMBO Meiosis Workshop 25th-29th August 2019 La Rochelle, Aug 2019, La Rochelle, France Poster de conférence hal-04284850v1
Development of a new high-throughput 105K presence/absence variation genotyping array for quantitative genetic studies. C. Mabire,J. Duarte,A. Darracq,A. Piranni,H. Rimbertet al. 60th Annual Maize Genetics Conference, Mar 2018, Saint-Malo, France Poster de conférence hal-04478801v1
Deciphering strucutral variation in wheat genome using resequencing data Romain de Oliveira,Emeric Dynomant,Hélène Rimbert,Jaroslav Dolezel,Federica Cattonaroet al. PAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. , 2018 Poster de conférence hal-02787820v1

Chapitre d'ouvrage (1)

Structural and Functional Annotation of the Wheat Genome Frédéric Choulet,Xi Wang,Manuel Spannagl,David Swarbreck,Hélène Rimbertet al. Rudi Appels, Kellye Eversole, Catherine Feuillet, Dusti Gallagher. The Wheat Genome, Springer International Publishing, pp.51-73, 2024, Compendium of Plant Genomes, ⟨10.1007/978-3-031-38294-9_4⟩ Chapitre d'ouvrage hal-04297331v1

Rapport (1)

DéBAT : Analyse de Diversité d'un panel de pré-breeding de Blé tendre par une approche Transcriptomique-projet FSOV 2018 M Hélène Rimbert,Frédéric Choulet,Odile Argillier,Jerome Auzanneau,Mark Daveyet al. INRAE. 2024 Rapport (rapport contrat/projet) hal-04713932v1

Article dans une revue (19)

Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U‐genome for wheat improvement Jatinder Singh,Santosh Gudi,Peter J Maughan,Zhaohui Liu,James Kolmeret al. Plant Biotechnology Journal, 2024, pp.1-15. ⟨10.1111/pbi.14470⟩ Article dans une revue hal-04707299v1
Bread wheat (T. aestivum) variability: Phenotypic and genotypic data from 75 varieties Mélanie Lavoignat,Emmanuelle Bancel,Hélène Rimbert,Sandrine Bagnon,Michaël Benignaet al. Data in Brief, 2023, 46, pp.108807. ⟨10.1016/j.dib.2022.108807⟩ Article dans une revue (data paper) hal-04027932v1
All families of transposable elements were active in the recent wheat genome evolution and polyploidy had no impact on their activity Nathan Papon,Pauline Lasserre-Zuber,Hélène Rimbert,Romain de Oliveira,Etienne Pauxet al. Plant Genome, 2023, ⟨10.1002/tpg2.20347⟩ Article dans une revue hal-04143737v1
Location and Identification on Chromosome 3B of Bread Wheat of Genes Affecting Chiasma Number Benoit Darrier,Isabelle Colas,Hélène Rimbert,Frédéric Choulet,Jeanne Bazileet al. Plants, 2022, 11, ⟨10.3390/plants11172281⟩ Article dans une revue hal-03766369v1
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding Jean-Marc Aury,Stefan Engelen,Benjamin Istace,Cécile Monat,Pauline Lasserre-Zuberet al. GigaScience, 2022, 11, pp.1-18. ⟨10.1093/gigascience/giac034⟩ Article dans une revue hal-03658639v1
Comparative genomics of eight fusarium graminearum strains with contrasting aggressiveness reveals an expanded open pangenome and extended effector content signatures Tarek Alouane,Hélène Rimbert,Jörg Bormann,Gisela Abigail Gonzalez-Montiel,Sandra Loesgenet al. International Journal of Molecular Sciences, 2021, 22 (12), ⟨10.3390/ijms22126257⟩ Article dans une revue hal-03287092v1
Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly Tingting Zhu,Le Wang,Hélène Rimbert,Juan Rodriguez,Karin Dealet al. The Plant Journal, 2021, ⟨10.1111/tpj.15289⟩ Article dans une revue hal-03285883v1
SPO11.2 is essential for programmed double strand break formation during meiosis in bread wheat (Triticum aestivum L.) Fatiha Benyahya,Isabelle Nadaud,Olivier da Ines,Hélène Rimbert,Charles I. Whiteet al. The Plant Journal, 2020, 104 (1), pp.30-43. ⟨10.1111/tpj.14903⟩ Article dans une revue hal-02888993v1
Structural variations affecting genes and transposable elements of chromosome 3B in wheats Romain de Oliveira,Hélène Rimbert,François Balfourier,Jonathan Kitt,Emeric Dynomantet al. Frontiers in Genetics, 2020, 11, 891/15 p. ⟨10.3389/fgene.2020.00891⟩ Article dans une revue hal-02917729v1
High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array Clément Mabire,Jorge Duarte,Aude Darracq,Ali Pirani,Hélène Rimbertet al. BMC Genomics, 2019, 20 (1), ⟨10.1186/s12864-019-6136-9⟩ Article dans une revue hal-02393099v1
Worldwide phylogeography and history of wheat genetic diversity François Balfourier,Sophie Bouchet,Sandra Robert,Romain de Oliveira,Hélène Rimbertet al. Science Advances , 2019, 5 (5), pp.eaav0536. ⟨10.1126/sciadv.aav0536⟩ Article dans une revue hal-02172516v1
Genome sequence of fusarium graminearum strain MDC_Fg1, isolated from bread wheat grown in France Tarek Alouane,Hélène Rimbert,Francis Fabre,Florence Cambon,Thierry Langinet al. Microbiology Resource Announcements, 2018, 7 (19), ⟨10.1128/MRA.01260-18⟩ Article dans une revue hal-02622524v1
Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data Michael Alaux,Jane Rogers,Thomas Letellier,Raphaël Flores,Françoise Alfamaet al. Genome Biology, 2018, 19 (1), pp.905-911. ⟨10.1186/s13059-018-1491-4⟩ Article dans une revue hal-02278879v1
High throughput SNP discovery and genotyping in hexaploid wheat Hélène Rimbert,Benoît Darrier,Julien Navarro,Jonathan Kitt,Frédéric Chouletet al. PLoS ONE, 2018, 13 (1), pp.1-19. ⟨10.1371/journal.pone.0186329⟩ Article dans une revue hal-02628543v1
Shifting the limits in wheat research and breeding using a fully annotated reference genome . International Wheat Genome Sequencing Consortium (iwgsc),Arnaud Bellec,Helene Berges,Sonia Vautrin,Michael Alauxet al. Science, 2018, 361 (6403), pp.7191. ⟨10.1126/science.aar7191⟩ Article dans une revue hal-01885399v1
High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism Benoit Darrier,Hélène Rimbert,François Balfourier,Lise Pingault,Ambre-Aurore Josselinet al. Genetics, 2017, 206 (3), pp.1373-1388. ⟨10.1534/genetics.116.196014⟩ Article dans une revue hal-04686468v1
Exploiting the repetitive fraction of the wheat genome for high-throughput single-nucleotide polymorphism discovery and Genotyping Nelly Cubizolles,Elodie Rey,Frédéric Choulet,Hélène Rimbert,Christel C. Laugieret al. PLANT GENOME, 2016, 9 (1), ⟨10.3835/plantgenome2015.09.0078⟩ Article dans une revue hal-02635405v1
Genome interplay in the grain transcriptome of hexaploid bread wheat Matthias Pfeifer,Karl G. Kugler,Simen R. Sandve,Bujie Zhan,Heidi Rudiet al. Science, 2014, 345 (6194), pp.287-287. ⟨10.1126/science.1250091⟩ Article dans une revue hal-02889033v1
Ancient hybridizations among the ancestral genomes of bread wheat T. Marcussen,S. Sandve,L. Heier,M. Spannagl,M. Pfeiferet al. Science, 2014, 345 (6194), pp.1250092-1250092. ⟨10.1126/science.1250092⟩ Article dans une revue hal-02889053v1

Pré-publication, Document de travail (1)

High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® Axiom® array Clement Mabire,Duarte Jorge,Aude Darracq,Ali Pirani,Hélène Rimbertet al. 2018 Pré-publication, Document de travail (preprint/prepublication) hal-02788790v1