J. Mark Cock

Publications

Article dans une revue (166)

Functional roles of mastigonemes in Ectocarpus gamete swimming revealed by CRISPR-Cas9 mutagenesis Minori Harada,Gang Fu,Yacine Badis,J. Mark Cock,Susana Coelhoet al. Protoplasma, 2026, ⟨10.1007/s00709-026-02159-0⟩ Article dans une revue hal-05494738v1
Comparative view of DNA methylation in stramenopiles and other eukaryotes: Focus on 5-methylcytosine Ananya Khatei,Leïla Tirichine,M Junaid Sidiq,J. Mark Cock,Alexander Juterbock Algal Research - Biomass, Biofuels and Bioproducts, 2026, 94, ⟨10.1016/j.algal.2026.104551⟩ Article dans une revue hal-05522428v1
Identification of novel H2A histone variants across diverse clades of algae Ellyn Rousselot,Zofia Nehr,Jean-Marc Aury,France Denoeud,J. Mark Cocket al. Genome Biology, 2025, 26 (1), pp.299. ⟨10.1186/s13059-025-03656-w⟩ Article dans une revue hal-05279477v1
Wild and farmed Saccharina latissima in Europe: genetic insights for sustainable cultivation, traceability and environmental challenges Lucie Jaugeon,Christophe Destombe,Paolo Ruggeri,Stéphane Mauger,Jérôme Coudretet al. BioRxiv, 2025, ⟨10.1101/2025.02.06.636791⟩ Article dans une revue hal-05557576v1
Life-cycle-related gene expression patterns in the brown algae Pélagie Ratchinski,Olivier Godfroy,Benjamin Noel,Jean-Marc Aury,J. Mark Cock eLife, 2025, 14, ⟨10.7554/elife.107449⟩ Article dans une revue hal-05374384v1
Multiple, diverse endogenous giant virus elements within the genome of a brown alga Dean Mckeown,Alexandre Cormier,Declan Schroeder,Arnaud Couloux,Nachida Tadrentet al. Virus Evolution, 2025, 9 (11), pp.2127-2144. ⟨10.1093/ve/veaf009⟩ Article dans une revue hal-05363437v1
Professor Dieter G. Müller's legacy in algal developmental biology and phycology (1935–2025) Wilhelm Boland,Ingo Maier,Akira Peters,Hiroshi Kawai,Renato Westermeieret al. Journal of Phycology, 2025, 61 (6), pp.1534-1535. ⟨10.1111/jpy.70106⟩ Article dans une revue hal-05471589v1
De novo transcriptome of the red alga Gracilariopsis tenuifrons (Gracilariales, Rhodophyta) in response to prolonged temperature stress André Faria,Olivier Godfroy,J. Mark Cock,Estela Plastino Journal of Phycology, 2025, ⟨10.1111/jpy.70067⟩ Article dans une revue hal-05327848v1
Multiple, diverse endogenous giant virus elements within the genome of a brown alga Dean Mckeown,Alexandre Cormier,Declan C Schroeder,Arnaud Couloux,Nachida Tadrentet al. Virus Evolution, 2025, 11 (1), ⟨10.1093/ve/veaf009⟩ Article dans une revue hal-04997831v1
Origin and evolutionary trajectories of brown algal sex chromosomes Josué Barrera-Redondo,Agnieszka Lipinska,Pengfei Liu,Erica Dinatale,Guillaume Cossardet al. Nature Ecology & Evolution, 2025, ⟨10.1038/s41559-025-02838-w⟩ Article dans une revue hal-05224288v1
Genetic and transcriptomic analysis of a Saccharina latissima segregating F2 family detects groups of individuals with different responses to temperature stress Zofia Nehr,Komlan Avia,Olivier Godfroy,Bertrand Jacquemin,Stephane Maugeret al. Algal Research - Biomass, Biofuels and Bioproducts, 2025, 91, pp.104203. ⟨10.1016/j.algal.2025.104203⟩ Article dans une revue hal-05187351v1
The genetic structure of wild and cultivated Saccharina latissima populations across European coasts provides guidance for sustainable aquaculture, traceability, and conservation Lucie Jaugeon,Christophe Destombe,Paolo Ruggeri,Stéphane Mauger,Jérôme Coudretet al. Journal of Applied Phycology, 2025, ⟨10.1007/s10811-025-03583-0⟩ Article dans une revue hal-05163812v1
18S and ITS2 rRNA gene sequence-structure phylogeny of the Phaeophyceae (SAR, Stramenopiles) with special reference to Laminariales Leon Berchtenbreiter,Abdullah Emir Mumcu,Antonia Stephanie Rackevei,J. Mark Cock,Hiroshi Kawaiet al. European Journal of Protistology, 2024, 95, pp.126107. ⟨10.1016/j.ejop.2024.126107⟩ Article dans une revue hal-04654945v1
Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems France Denoeud,Olivier Godfroy,Corinne Cruaud,Svenja Heesch,Zofia Nehret al. Cell, 2024, 187 (24), pp.6943-6965. ⟨10.1016/j.cell.2024.10.049⟩ Article dans une revue hal-04794231v1
Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history Lisa Mazéas,Ahlem Bouguerba-Collin,J. Mark Cock,France Denoeud,Olivier Godfroyet al. BMC Genomics, 2024, 25 (1), pp.950. ⟨10.1186/s12864-024-10811-3⟩ Article dans une revue hal-04734202v1
The model system Ectocarpus: Integrating functional genomics into brown algal research J. Mark Cock Journal of Phycology, 2023, ⟨10.1111/jpy.13310⟩ Article dans une revue (article de synthèse) hal-03896148v1
The baseless mutant links protein phosphatase 2A with basal cell identity in the brown alga Ectocarpus Olivier Godfroy,Min Zheng,Haiqin Yao,Agnes Henschen,Akira Peterset al. Development (Cambridge, England), 2023, 150 (4), ⟨10.1242/dev.201283⟩ Article dans une revue hal-03990893v1
An Efficient Chromatin Immunoprecipitation Protocol for the Analysis of Histone Modification Distributions in the Brown Alga Ectocarpus Simon Bourdareau,Olivier Godfroy,Josselin Gueno,Delphine Scornet,Susana Coelhoet al. Methods and Protocols, 2022, 5 (3), pp.36. ⟨10.3390/mps5030036⟩ Article dans une revue hal-03658367v1
Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences Shingo Akita,Christophe Vieira,Takeaki Hanyuda,Florence Rousseau,Corinne Cruaudet al. Molecular Phylogenetics and Evolution, 2022, 168, pp.107408. ⟨10.1016/j.ympev.2022.107408⟩ Article dans une revue hal-03553061v1
Selection drives convergent gene expression changes during transitions to co-sexuality in haploid sexual systems Guillaume Cossard,Olivier Godfroy,Zofia Nehr,Corinne Cruaud,J. Mark Cocket al. Nature Ecology & Evolution, 2022, 6, pp.579-589. ⟨10.1038/s41559-022-01692-4⟩ Article dans une revue hal-03619076v1
Chromatin landscape associated with sexual differentiation in a UV sex determination system Josselin Gueno,Michael Borg,Simon Bourdareau,Guillaume Cossard,Olivier Godfroyet al. Nucleic Acids Research, 2022, 50 (6), pp.3307-3322. ⟨10.1093/nar/gkac145⟩ Article dans une revue hal-03608518v1
Role and Evolution of the Extracellular Matrix in the Acquisition of Complex Multicellularity in Eukaryotes: A Macroalgal Perspective Bernard Kloareg,Yacine Badis,J. Mark Cock,Gurvan Michel Genes, 2021, 12 (7), pp.1059. ⟨10.3390/genes12071059⟩ Article dans une revue hal-03286803v1
Priming of Marine Macrophytes for Enhanced Restoration Success and Food Security in Future Oceans Alexander Jueterbock,Antoine J P Minne,J. Mark Cock,Melinda A Coleman,Thomas Wernberget al. Frontiers in Marine Science, 2021, 8, ⟨10.3389/fmars.2021.658485⟩ Article dans une revue hal-03199094v1
Biochemical characteristics of a diffusible factor that induces gametophyte to sporophyte switching in the brown alga Ectocarpus Haiqin Yao,Delphine Scornet,Murielle Jam,Cécile Hervé,Philippe Potinet al. Journal of Phycology, 2021, 57 (3), pp.742-753. ⟨10.1111/jpy.13126⟩ Article dans une revue hal-03089431v1
Histone modifications during the life cycle of the brown alga Ectocarpus Simon Bourdareau,Leila Tirichine,Damarys Loew,Delphine Scornet,Yue Wuet al. Genome Biology, 2021, 22 (12), ⟨10.1186/s13059-020-02216-8⟩ Article dans une revue hal-03084385v1
Exploring, harnessing and conserving marine genetic resources towards a sustainable seaweed aquaculture Yacine Badis,Delphine Scornet,Minori Harada,Céline Caillard,Olivier Godfroyet al. Plants, People, Planet, 2021, 3 (4), pp.337-349. ⟨10.1002/ppp3.10190⟩ Article dans une revue mnhn-03437699v1
Evolution of life cycles and reproductive traits: insights from the brown algae Svenja Heesch,Martha Serrano-Serrano,Josué Barrera‐redondo,Rémy Luthringer,Akira F Peterset al. Journal of Evolutionary Biology, 2021, 34 (7), pp.992-1009. ⟨10.1111/jeb.13880⟩ Article dans une revue hal-03254135v1
Signatures of Transcription Factor Evolution and the Secondary Gain of Red Algae Complexity Romy Petroll,Mona Schreiber,Hermann Finke,J. Mark Cock,Sven B. Gouldet al. Genes, 2021, 12 (7), pp.1055. ⟨10.3390/genes12071055⟩ Article dans une revue hal-03285072v1
Targeted CRISPR‐Cas9‐based gene knockouts in the model brown alga Ectocarpus Yacine Badis,Delphine Scornet,Minori Harada,Céline Caillard,Olivier Godfroyet al. New Phytologist, 2021, 231 (5), pp.2077-2091. ⟨10.1111/nph.17525⟩ Article dans une revue hal-03356727v1
Evolution of Multicellularity J. Mark Cock Genes, 2021, 12 (10), pp.1532. ⟨10.3390/genes12101532⟩ Article dans une revue hal-03358993v1
A partially sex‐reversed giant kelp sheds light into the mechanisms of sexual differentiation in a UV sexual system Dieter G Müller,Enora Gaschet,Olivier Godfroy,Josselin Gueno,Guillaume Cossardet al. New Phytologist, 2021, ⟨10.1111/nph.17582⟩ Article dans une revue hal-03274489v1
Cytokinin and Ethylene Cell Signaling Pathways from Prokaryotes to Eukaryotes Baptiste Bidon,Samar Kabbara,Vincent Courdavault,Gaëlle Glévarec,Audrey Oudinet al. Cells, 2020, 9 (11), pp.2526. ⟨10.3390/cells9112526⟩ Article dans une revue (article de synthèse) hal-03019153v1
Organelle inheritance and genome architecture variation in isogamous brown algae Ji Won Choi,Louis Graf,Akira F Peters,J. Mark Cock,Koki Nishitsujiet al. Scientific Reports, 2020, 10 (1), pp.2048. ⟨10.1038/s41598-020-58817-7⟩ Article dans une revue hal-02935623v1
Parallelisable non-invasive biomass, fitness and growth measurement of macroalgae and other protists with nephelometry Benoît Calmes,Martina Strittmatter,Bertrand Jacquemin,Marie-Mathilde Perrineau,Céline Rousseauet al. Algal Research - Biomass, Biofuels and Bioproducts, 2020, 46, pp.101762. ⟨10.1016/j.algal.2019.101762⟩ Article dans une revue hal-02462340v1
instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder Lyam Baudry,Nadège Guiglielmoni,Hervé Marie-Nelly,Alexandre Cormier,Komlan Aviaet al. Genome Biology, 2020, 21 (1), pp.148. ⟨10.1186/s13059-020-02041-z⟩ Article dans une revue pasteur-02873422v1
Production and Bioassay of a Diffusible Factor That Induces Gametophyte-to-Sporophyte Developmental Reprogramming in the Brown Alga Ectocarpus Haiqin Yao,Delphine Scornet,Yacine Badis,Akira F Peters,Murielle Jamet al. Bio-protocol , 2020, 10, ⟨10.21769/bioprotoc.3753⟩ Article dans une revue hal-02995785v1
Brown Algal Model Organisms Susana M. Coelho,J. Mark Cock Annual Review of Genetics, 2020, 54, pp.71-92. ⟨10.1146/annurev-genet-030620-093031⟩ Article dans une revue hal-03082916v1
Phylogeny and Evolution of the Brown Algae Trevor T Bringloe,Samuel Starko,Rachael M Wade,Christophe Vieira,Hiroshi Kawaiet al. Critical Reviews in Plant Sciences, 2020, 39, pp.281 - 321. ⟨10.1080/07352689.2020.1787679⟩ Article dans une revue hal-02995644v1
Ectocarpus: an evo-devo model for the brown algae Susana M Coelho,Akira F Peters,Dieter Müller,J. Mark Cock EvoDevo, 2020, 11 (1), pp.19. ⟨10.1186/s13227-020-00164-9⟩ Article dans une revue hal-02935769v1
Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae Alok Arun,Susana Coelho,Akira F Peters,Simon Bourdareau,Laurent Pérèset al. eLife, 2019, 8, pp.e43101. ⟨10.7554/eLife.43101⟩ Article dans une revue hal-02042404v1
Megaviruses: an involvement in phytohormone receptor gene transfer in brown algae? Samar Kabbara,Baptiste Bidon,Jaafar Kilani,Thomas Duge de Bernonville,Marc Clastreet al. Gene, 2019, 704, pp.149-151. ⟨10.1016/j.gene.2019.04.055⟩ Article dans une revue hal-02137038v1
A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus Laure Mignerot,Komlan Avia,Remy Luthringer,Agnieszka Lipinska,Akira F Peterset al. PLoS Genetics, 2019, 15 (6), pp.e1008211. ⟨10.1371/journal.pgen.1008211⟩ Article dans une revue hal-02170844v1
Rapid turnover of life-cycle-related genes in the brown algae A. P Lipinska,M. L Serrano-Serrano,A. Cormier,A. F. Peters,K. Kogameet al. Genome Biology, 2019, 20, pp.35. ⟨10.1186/s13059-019-1630-6⟩ Article dans une revue hal-02046119v1
Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes Samar Kabbara,Anais Herivaux,Thomas Dugé de Bernonville,Vincent Courdavault,Marc Clastreet al. Genome Biology and Evolution, 2019, 11 (1), pp.86-108. ⟨10.1093/gbe/evy213⟩ Article dans une revue hal-02098285v1
Origin and evolution of sex‐determination systems in the brown algae Susana Coelho,Laure Mignerot,J. Mark Cock New Phytologist, 2019, 222 (4), pp.1751-1756. ⟨10.1111/nph.15694⟩ Article dans une revue hal-02137076v1
Unusual Patterns of Mitochondrial Inheritance in the Brown Alga Ectocarpus Laure Mignerot,Chikako Nagasato,Akira F Peters,Marie-Mathilde Perrineau,Delphine Scornetet al. Molecular Biology and Evolution, 2019, 36 (12), pp.2778-2789. ⟨10.1093/molbev/msz186⟩ Article dans une revue hal-02269449v1
Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus Komlan Avia,Agnieszka P Lipinska,Laure Mignerot,Alejandro Montecinos,Mahwash Jamyet al. Genes, 2018, 9 (6), pp.286. ⟨10.3390/genes9060286⟩ Article dans une revue hal-03145778v1
DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus Olivier Godfroy,Toshiki Uji,Chikako Nagasato,Agnieszka Lipinska,Delphine Scornetet al. The Plant cell, 2018, 29 (12), pp.3102-3122. ⟨10.1105/tpc.17.00440⟩ Article dans une revue hal-03145763v1
UV Chromosomes and Haploid Sexual Systems Susana Margarida Coelho,Josselin Gueno,Agnieszka Paulina Lipinska,Jeremy Mark Cock,James G Umen Trends in Plant Science, 2018, 23 (9), pp.794 - 807. ⟨10.1016/j.tplants.2018.06.005⟩ Article dans une revue hal-02995679v1
The Algal Revolution Juliet Brodie,Cheong Xin Chan,Olivier de Clerck,J. Mark Cock,Susana Coelhoet al. Trends in Plant Science, 2017, 22 (8), pp.726-738. ⟨10.1016/j.tplants.2017.05.005⟩ Article dans une revue istex hal-01806394v1
Biotic interactions as drivers of algal origin and evolution Juliet Brodie,Steven Ball,François-Yves Bouget,Cheong Xin Chan,Olivier de Clercket al. New Phytologist, 2017, 216 (3), pp.670-681. ⟨10.1111/nph.14760⟩ Article dans une revue (article de synthèse) hal-01806393v1
Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus Alexandre Cormier,Komlan Avia,Lieven Sterck,Thomas Derrien,Valentin Wucheret al. New Phytologist, 2017, 214 (1), pp.219-232. ⟨10.1111/nph.14321⟩ Article dans une revue hal-03145812v1
The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel family of cysteine-rich proteins that have an unusual distribution across the eukaryotes Nicolas Macaisne,Fuli Liu,Delphine Scornet,Akira F. Peters,Agnieszka Lipinskaet al. Development (Cambridge, England), 2017, ⟨10.1242/dev.141523⟩ Article dans une revue hal-01436640v1
Multiple gene movements into and out of haploid sex chromosomes Agnieszka Lipinska,Nicholas R T Toda,Svenja Heesch,Akira F Peters,J. Mark Cocket al. Genome Biology, 2017, 18, pp.104. ⟨10.1186/s13059-017-1201-7⟩ Article dans une revue hal-01806388v1
High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus Komlan Avia,Susana Coelho,Gabriel J Montecinos,Alexandre Cormier,Fiona Lercket al. Scientific Reports, 2017, 7 (1), pp.43241. ⟨10.1038/srep43241⟩ Article dans une revue hal-03145860v1
Rapid Evolution of microRNA Loci in the Brown Algae J. Mark Cock,Fuli Liu,Delin Duan,Simon Bourdareau,Agnieszka P. Lipinskaet al. Genome Biology and Evolution, 2017, 9 (3), pp.740 - 749. ⟨10.1093/gbe/evx038⟩ Article dans une revue hal-01502456v1
The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel 1 family of cysteine-rich proteins that have an unusual distribution across the eukaryotes Nicolas N. Macaisne,Fuli Liu,Delphine Scornet,Akira F Peters,Agnieszka Lipinskaet al. Development, 2016, 144, pp.409-418. ⟨10.1242/dev.141523⟩ Article dans une revue hal-01925145v1
Characterization of newly developed expressed sequence tag-derived microsatellite markers revealed low genetic diversity within and low connectivity between European Saccharina latissima populations Jaromir Guzinski,Stéphane Mauger,J. Mark Cock,Myriam Valero Journal of Applied Phycology, 2016, 28 (5), pp.3057-3070. ⟨10.1007/s10811-016-0806-7⟩ Article dans une revue hal-01297556v1
Genome-wide comparison of ultraviolet and ethyl methanesulphonate mutagenesis methods for the brown alga Ectocarpus Olivier Godfroy,Akira F. Peters,Susana M. Coelho,J. Mark Cock Marine Genomics, 2015, 24 (Part 1), pp.109-113. ⟨10.1016/j.margen.2015.03.007⟩ Article dans une revue hal-01142006v1
The Pseudoautosomal Regions of the U/V Sex Chromosomes of the Brown Alga Ectocarpus Exhibit Unusual Features Remy Luthringer,Agnieszka P. Lipinska,Denis Roze,Alexandre Cormier,Nicolas Macaisneet al. Molecular Biology and Evolution, 2015, 32 (11), pp.2973-2985. ⟨10.1093/molbev/msv173⟩ Article dans une revue hal-01806430v1
Development of PCR‐Based Markers to Determine the Sex of Kelps Agnieszka Lipinska,Sophia Ahmed,Akira F Peters,Sylvain Faugeron,J. Mark Cocket al. PLoS ONE, 2015, 10 (10), pp.e0140535. ⟨10.1371/journal.pone.0140535⟩ Article dans une revue hal-01226462v1
Sexual Dimorphism and the Evolution of Sex-Biased Gene Expression in the Brown Alga Ectocarpus Agnieszka Lipinska,Alexandre Cormier,Remy Luthringer,Akira F Peters,Erwan Correet al. Molecular Biology and Evolution, 2015, 32 (6), pp.1581-1597. ⟨10.1093/molbev/msv049⟩ Article dans une revue hal-01285048v1
Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus Lucia Couceiro,Mickael Le Gac,Heather M. Hunsperger,Stéphane Mauger,Christophe Destombeet al. Evolution - International Journal of Organic Evolution, 2015, 69 (7), pp.1808-1822. ⟨10.1111/evo.12702⟩ Article dans une revue hal-01167462v1
microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus James E. Tarver,Alexandre Cormier,Natalia Pinzón,Richard S. Taylor,Wilfrid Carréet al. Nucleic Acids Research, 2015, 43 (13), pp.6384-6398. ⟨10.1093/nar/gkv578⟩ Article dans une revue hal-01278012v1
A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp. Sophia S. Ahmed,J. Mark Cock,Eugenie Pessia,Remy Luthringer,Alexandre Cormieret al. Current Biology, 2014, 24 (17), pp.1945-1957. ⟨10.1016/j.cub.2014.07.042⟩ Article dans une revue hal-01132642v1
Production and Emission of Volatile Compounds by Petal Cells Sylvie Baudino,Jean-Claude Caissard,Véronique Bergougnoux,Frédéric Jullien,Jean-Louis Magnardet al. Plant Signaling and Behavior, 2014, 2 (6), pp.525-526. ⟨10.4161/psb.2.6.4659⟩ Article dans une revue hal-04735823v1
Proteomics analysis of heterogeneous flagella in brown algae (stramenopiles). Gang Fu,Chikako Nagasato,Seiko Oka,J Mark Cock,Taizo Motomura Protist, 2014, 165 (5), pp.662-75 Article dans une revue hal-01113862v1
Evolution and regulation of complex life cycles: a brown algal perspective J Mark Cock,Olivier Godfroy,Nicolas N. Macaisne,Akira F Peters,Susana Coelho Current Opinion in Plant Biology, 2014, 17, pp.1-6. ⟨10.1016/j.pbi.2013.09.004⟩ Article dans une revue hal-01806434v1
Sexual dimorphism in the brown algae R. Luthringer,A. Cormier,S. Ahmed,A. F. Peters,J. Mark Cocket al. Perspectives in Phycology, 2014, 1 (1), pp.11-25. ⟨10.1127/2198-011X/2014/0002⟩ Article dans une revue hal-01806431v1
GENE SILENCING IN FUCUS EMBRYOS: DEVELOPMENTAL CONSEQUENCES OF RNAi-MEDIATED CYTOSKELETAL DISRUPTION Garry Farnham,Martina Strittmatter,Susana Coelho,J. Mark Cock,Colin Brownlee Journal of Phycology, 2013, 49 (5), pp.819-829. ⟨10.1111/jpy.12096⟩ Article dans une revue istex hal-01806438v1
Pan genome of the phytoplankton Emiliania underpins its global distribution Betsy A Read,Jessica Kegel,Mary J Klute,Alan Kuo,Stephane C Lefebvreet al. Nature, 2013, 499 (7457), pp.209-213. ⟨10.1038/nature12221⟩ Article dans une revue hal-01074841v1
Non-cell autonomous regulation of life cycle transitions in the model brown alga Ectocarpus. Alok Arun,Nick T Peters,Delphine Scornet,Akira F Peters,J. Mark Cocket al. New Phytologist, 2013, 197 (2), pp.503-10. ⟨10.1111/nph.12007⟩ Article dans une revue hal-01071265v1
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Jonas Collén,Betina Porcel,Wilfrid Carré,Steven G Ball,Cristian Chaparroet al. Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩ Article dans une revue hal-01073830v1
Ecological and evolutionary genomics of marine photosynthetic organisms. Susana M Coelho,Nathalie Simon,Sophia Ahmed,J Mark Cock,Frédéric Partensky Molecular Ecology, 2013, 22 (3), pp.867-907. ⟨10.1111/mec.12000⟩ Article dans une revue hal-00817749v1
Genomics of brown algae: current advances and future prospects J Mark Cock,Alok Arun,Olivier Godfroy,Nicolas Macaisne,Martina Strittmatteret al. GENES & GENOMICS, 2012, 34, pp.1 - 5. ⟨10.1007/s13258-010-0225-0⟩ Article dans une revue hal-03441669v1
Immunostaining of Ectocarpus Cells S. M Coelho,D. Scornet,S. Rousvoal,N. Mark Peters,L. F Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067975 - pdb.prot067975. ⟨10.1101/pdb.prot067975⟩ Article dans une revue hal-01926736v1
The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium J. Mark Cock,Lieven Sterck,Sophia Ahmed,Andrew E. Allen,Grigoris Amoutziaset al. Advances in Botanical Research, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩ Article dans une revue hal-02649287v1
How to Cultivate Ectocarpus S. M Coelho,D. Scornet,S. Rousvoal,N. T Peters,L. Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (2), pdb.prot067934 - pdb.prot067934. ⟨10.1101/pdb.prot067934⟩ Article dans une revue hal-01926731v1
Isolation and Regeneration of Protoplasts from Ectocarpus S. M Coelho,D. Scornet,S. Rousvoal,N. Mark Peters,L. F Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067959 - pdb.prot067959. ⟨10.1101/pdb.prot067959⟩ Article dans une revue hal-01926739v1
Ectocarpus: A Model Organism for the Brown Algae Susana M Coelho,Delphine Scornet,Sylvie Rousvoal,Nick T Peters,Laurence Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (2), pdb.emo065821 - pdb.emo065821. ⟨10.1101/pdb.emo065821⟩ Article dans une revue hal-01926740v1
Genetic Crosses between Ectocarpus Strains S. M Coelho,D. Scornet,S. Rousvoal,N. Mark Peters,L. F Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (2), pdb.prot067942 - pdb.prot067942. ⟨10.1101/pdb.prot067942⟩ Article dans une revue hal-01926732v1
Extraction of High-Quality Genomic DNA from Ectocarpus S. M Coelho,D. Scornet,S. Rousvoal,N. Mark Peters,L. F Dartevelleet al. Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067967 - pdb.prot067967. ⟨10.1101/pdb.prot067967⟩ Article dans une revue hal-01926734v1
Genetic regulation of life cycle transitions in the brown alga ectocarpus Susana M. Coelho,Olivier Godfroy,Alok Arun,Gildas Le Corguillé,Akira.F. Peterset al. Plant Signaling & Behavior , 2011, 108, pp.11518 - 11523. ⟨10.1073/pnas.1102274108⟩ Article dans une revue hal-03441679v1
OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus Susana M. Coelho,Olivier Godfroy,Alok Arun,Gildas Le Corguillé,Akira F. Peterset al. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (28), pp.11518-11523. ⟨10.1073/pnas.1102274108⟩ Article dans une revue hal-01806390v1
In Silico Survey of the Mitochondrial Protein Uptake and Maturation Systems in the Brown Alga Ectocarpus siliculosus Ludovic Delage,Catherine Leblanc,Pi Nyvall Collén,Bernhard Gschloessl,Marie-Pierre Oudotet al. PLoS ONE, 2011, 6 (5), pp.e19540. ⟨10.1371/journal.pone.0019540⟩ Article dans une revue hal-01806425v1
Algal models in plant biology J. Mark Cock,S. M Coelho Journal of Experimental Botany, 2011, 62 (8), pp.2425 - 2430. ⟨10.1093/jxb/err117⟩ Article dans une revue hal-01926743v1
Characterization of GDP-mannose Dehydrogenase from the Brown Alga Ectocarpus siliculosus Providing the Precursor for the Alginate Polymer Raimund Tenhaken,Elena Voglas,J. Mark Cock,Volker Neu,Christian G Huber Journal of Biological Chemistry, 2011, 286 (19), pp.16707 - 16715. ⟨10.1074/jbc.m111.230979⟩ Article dans une revue hal-01925539v1
Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae) Simon M Dittami,Caroline Proux,Sylvie Rousvoal,Akira F Peters,J Mark Cocket al. BMC Molecular Biology, 2011, 12, pp.2. ⟨10.1186/1471-2199-12-2⟩ Article dans une revue hal-00925432v1
Brown algae J. Mark Cock,Akira F. Peters,Susana M. Coelho Current Biology, 2011, 21 (15), pR573-R575. ⟨10.1016/j.cub.2011.05.006⟩ Article dans une revue hal-01806442v1
A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence Svenja Heesch,Ga Youn Cho,Akira F Peters,Gildas Le Corguillé,Cyril Falentinet al. New Phytologist, 2010, 188 (1), pp.42-51. ⟨10.1111/j.1469-8137.2010.03273.x⟩ Article dans une revue hal-01806415v1
The $Ectocarpus$ genome and the independent evolution of multicellularity in brown algae J. Mark Cock,Lieven Sterck,Pierre Rouzé,Delphine Scornet,Andrew E. Allenet al. Nature, 2010, 465 (7298), pp.617-621. ⟨10.1038/nature09016⟩ Article dans une revue cea-00906990v1
Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes Gurvan Michel,Thierry Tonon,Delphine Scornet,J. Mark Cock,Bernard Kloareg New Phytologist, 2010, 188 (1), pp.67-81. ⟨10.1111/j.1469-8137.2010.03345.x⟩ Article dans une revue hal-01806417v1
Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus Andrés A Ritter,Martin Ubertini,Sarah Romac,Fanny Gaillard,Ludovic Delageet al. Proteomics, 2010, 10 (11), pp.2074 - 2088. ⟨10.1002/pmic.200900004⟩ Article dans une revue hal-01925564v1
Auxin Metabolism and Function in the Multicellular Brown Alga Ectocarpus siliculosus A. Le Bail,B. Billoud,N. Kowalczyk,M. Kowalczyk,M. Gicquelet al. Plant Physiology, 2010, 153 (1), pp.128 - 144. ⟨10.1104/pp.109.149708⟩ Article dans une revue hal-01925563v1
Role of endoreduplication and apomeiosis during parthenogenetic reproduction in the model brown alga Ectocarpus John H. Bothwell,Dominique Marie,Akira F. Peters,J. Mark Cock,Susana M. Coelho New Phytologist, 2010, 188 (1), pp.111-121. ⟨10.1111/j.1469-8137.2010.03357.x⟩ Article dans une revue hal-01254018v1
The Ectocarpus genome sequence: insights into brown algal biology and the evolutionary diversity of the eukaryotes J. Mark Cock,Susana M. Coelho,Colin Brownlee,Alison R Taylor New Phytologist, 2010, The Ectocarpus genome sequence’, 188 (1), pp.1-4. ⟨10.1111/j.1469-8137.2010.03454.x⟩ Article dans une revue hal-03441686v1
Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain Akira F. Peters,Aaron D. Mann,César A. Córdova,Juliet Brodie,Juan A. Correaet al. New Phytologist, 2010, 188 (1), pp.30-41. ⟨10.1111/j.1469-8137.2010.03303.x⟩ Article dans une revue hal-01806412v1
Models for understanding eucaryote development Delphine Cast,J. Mark Cock,Bernard Kloareg,Benoît Menand,Gurvan Michelet al. Biofutur, 2010, 314, pp.30-33 Article dans une revue hal-01183325v1
Reinstatement of Ectocarpus crouaniorum Thuret in Le Jolis as a third common species of Ectocarpus (Ectocarpales, Phaeophyceae) in Western Europe, and its phenology at Roscoff, Brittany Akira F Peters,Serinde J van Wijk,Ga Youn Cho,Delphine Scornet,Takeaki Hanyudaet al. Phycological Research, 2010, 58 (3), pp.157 - 170. ⟨10.1111/j.1440-1835.2010.00574.x⟩ Article dans une revue istex hal-01925565v1
The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes Gurvan Michel,Thierry Tonon,Delphine Scornet,J. Mark Cock,Bernard Kloareg New Phytologist, 2010, 188 (1), pp.82-97. ⟨10.1111/j.1469-8137.2010.03374.x⟩ Article dans une revue hal-01806414v1
Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids Gildas Le Corguillé,Gareth Pearson,Marta Valente,Carla Viegas,Bernhard Gschloesslet al. BMC Evolutionary Biology, 2009, 9, pp.253. ⟨10.1186/1471-2148-9-253⟩ Article dans une revue hal-01806420v1
Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress Simon M Dittami,Delphine Scornet,Jean-Louis Petit,Béatrice Segurens,Corinne da Silvaet al. Genome Biology, 2009, 10, pp.R66. ⟨10.1186/gb-2009-10-6-r66⟩ Article dans une revue hal-01806423v1
Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus Akira F. Peters,Delphine Scornet,Morgane Ratin,Bénédicte Charrier,Annabelle Monnieret al. Development (Cambridge, England), 2008, 135 (8), pp.1503-1512. ⟨10.1242/dev.016303⟩ Article dans une revue hal-01806436v1
HECTAR: A method to predict subcellular targeting in heterokonts Bernhard Gschloessl,Yann Guermeur,J. Mark Cock BMC Bioinformatics, 2008, 9 (393), pp.9:393. ⟨10.1186/1471-2105-9-393⟩ Article dans une revue hal-00359779v1
The FTO Gene, Implicated in Human Obesity, Is Found Only in Vertebrates and Marine Algae Steven Robbens,Pierre Rouzé,J. Mark Cock,Jürg Spring,Alexandra Z Wordenet al. Journal of Molecular Evolution, 2008, 66 (1), pp.80-84. ⟨10.1007/s00239-007-9059-z⟩ Article dans une revue hal-01925570v1
EARLY DEVELOPMENT PATTERN OF THE BROWN ALGA ECTOCARPUS SILICULOSUS (ECTOCARPALES, PHAEOPHYCEAE) SPOROPHYTE 1 Aude Le Bail,Bernard Billoud,Carole Maisonneuve,Akira F Peters,J. Mark Cocket al. European Journal of Phycology, 2008, 44 (5), pp.1269 - 1281. ⟨10.1111/j.1529-8817.2008.00582.x⟩ Article dans une revue istex hal-01925566v1
Scent evolution in Chinese roses Gabriel Scalliet,Florence Piola,Christophe Jean Douady,Stéphane Réty,Olivier Raymondet al. Proceedings of the National Academy of Sciences of the United States of America, 2008, 105 (15), pp.5927-5932. ⟨10.1073/pnas.0711551105⟩ Article dans une revue hal-02662642v1
Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus Aude Le Bail,Simon Dittami,Pierre-Olivier de Franco,Sylvie Rousvoal,J. Mark Cocket al. BMC Molecular Biology, 2008, 9, pp.75. ⟨10.1186/1471-2199-9-75⟩ Article dans une revue hal-01806432v1
Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research Bénédicte Charrier,Susana Coelho,Aude Le Bail,Thierry Tonon,Gurvan Michelet al. New Phytologist, 2008, 177 (2), pp.319-332. ⟨10.1111/j.1469-8137.2007.02304.x⟩ Article dans une revue hal-01806426v1
Both the adaxial and abaxial epidermal layers of the rose petal emit volatile scent compounds. V. Bergougnoux,J.C. Caissard,Florence Jullien,Jean-Louis Magnard,Gabriel Scallietet al. Planta, 2007, 226 (4), pp.853-866. ⟨10.1007/s00425-007-0531-1⟩ Article dans une revue istex hal-00189101v1
Production and Emission of Volatile Compounds by Petal Cells. Sylvie Baudino,Jean Claude Caissard,Véronique Bergougnoux,Frédéric Jullien,Jean-Louis Magnardet al. Plant Signaling and Behavior, 2007, 2 (6), pp.525-526 Article dans une revue ujm-00188391v1
Complex life cycles of multicellular eukaryotes: New approaches based on the use of model organisms Susana Coelho,Akira F Peters,Bénédicte Charrier,Denis Roze,Christophe Destombeet al. Gene, 2007, 406 (1-2), pp.152 - 170. ⟨10.1016/j.gene.2007.07.025⟩ Article dans une revue hal-01926745v1
BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size. Judit Szécsi,Caroline Joly,Karim Bordji,Emilie Varaud,J. Mark Cocket al. EMBO Journal, 2006, 25 (16), pp.3912-3920. ⟨10.1038/sj.emboj.7601270⟩ Article dans une revue hal-00188912v1
Role of Petal-Specific Orcinol O -Methyltransferases in the Evolution of Rose Scent Gabriel Scalliet,Claire Lionnet,Mickaël Le Bechec,Laurence Dutron,Jean-Louis Magnardet al. Plant Physiology, 2006, 140 (1), pp.18-29. ⟨10.1104/pp.105.070961⟩ Article dans une revue hal-04735831v1
Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics A. Peters,D. Marie,D. Scornet,B. Kloareg,J. Mark Cock Journal of Phycology, 2005, 41, pp.226 Article dans une revue hal-00098384v1
A W-box is required for full expression of the SA-responsive gene SFR2 Anne Rocher,Christian Dumas,J. Mark Cock Gene, 2005, 344, pp.181 - 192. ⟨10.1016/j.gene.2004.09.016⟩ Article dans une revue hal-01925572v1
GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts Sebastien Aubourg,Veronique Brunaud,Clémence Bruyère,J. Mark Cock,Richard Cookeet al. Nucleic Acids Research, 2005, 33, pp.D641-D646. ⟨10.1093/nar/gki115⟩ Article dans une revue hal-01189162v1
Antisense suppression of thioredoxinhmRNA in Brassica napus cv. Yosr Haffani,Thierry Gaude,J. Mark Cock,Daphne Goring Plant Molecular Biology, 2004, 55 (5), pp.619 - 630. ⟨10.1007/s11103-004-1126-x⟩ Article dans une revue istex hal-01925575v1
Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics. A.F. Peters,D. Marie,D. Scornet,B. Kloareg,J. Mark Cock Journal of Phycology, 2004, 40, pp.1079-1088 Article dans une revue hal-00098356v1
Inheritance of organelles in artificial hybrids of the isogamous multicellular chromist alga Ectocarpus siliculosus (Phaeophyceae) Akira F Peters,Delphine Scornet,Dieter Müller,Bernard Kloareg,J Mark Cock European Journal of Phycology, 2004, 39 (3), pp.235 - 242. ⟨10.1080/09670260410001683241⟩ Article dans une revue hal-01925574v1
Making inroads into plant receptor kinase signalling pathways Gabrielle Tichtinsky,Vincent Vanoosthuyse,J. Mark Cock,Thierry Gaude Trends in Plant Science, 2003, 8 (5), pp.231 - 237. ⟨10.1016/s1360-1385(03)00062-1⟩ Article dans une revue (article de synthèse) istex hal-01926780v1
Making inroads into plant receptor kinase signalling pathways Gabrielle Tichtinsky,V. Vanoosthuyse,J. Mark Cock,Thierry Gaude Trends in Plant Science, 2003, 8 (5), pp.231-237. ⟨10.1016/S1360-1385(03)00062-1⟩ Article dans une revue istex hal-03032851v1
Interaction of Calmodulin, a Sorting Nexin and Kinase-Associated Protein Phosphatase with the Brassica oleracea S Locus Receptor Kinase Vincent Vanoosthuyse,Gabrielle Tichtinsky,Christian Dumas,Thierry Gaude,J. Mark Cock Plant Physiology, 2003, 133 (2), pp.919 - 929. ⟨10.1104/pp.103.023846⟩ Article dans une revue hal-01925576v1
Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities J. Mark Cock,V. Vanoosthuyse,Thierry Gaude Current Opinion in Cell Biology, 2002, 14 (2), pp.230-236. ⟨10.1016/s0955-0674(02)00305-8⟩ Article dans une revue hal-03032855v1
Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases Gabriel Scalliet,Noellie Journot,Frédéric Jullien,Sylvie Baudino,Jean-Louis Magnardet al. FEBS Letters, 2002 Article dans une revue hal-01925579v1
Analysis of gene expression in rose petals using expressed sequence tags Stéphanie Channelière,Stëphane Riviere,Gabriel Scalliet,Judit Szécsi,Frédéric Jullienet al. FEBS Letters, 2002, 515 (1-3), pp.35-38. ⟨10.1016/S0014-5793(02)02413-4⟩ Article dans une revue hal-01925580v1
Biosynthesis of the major scent components 3,5‐dimethoxytoluene and 1,3,5‐trimethoxybenzene by novel rose O ‐methyltransferases Gabriel Scalliet,Noellie Journot,Frédéric Jullien,Sylvie Baudino,Jean-Louis Magnardet al. FEBS Letters, 2002, 523 (1-3), pp.113-118. ⟨10.1016/s0014-5793(02)02956-3⟩ Article dans une revue hal-04735849v1
Comparison of the expression patterns of two small gene families of S gene family receptor kinase genes during the defence response in Brassica oleracea and Arabidopsis thaliana Martine Pastuglia,Ranjan Swarup,Anne Rocher,Patrick Saindrenan,Dominique Robyet al. Gene, 2002, 282 (1-2), pp.215-225. ⟨10.1016/S0378-1119(01)00821-6⟩ Article dans une revue istex hal-01925582v1
Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities J. Mark Cock,Vincent Vanoosthuyse,Thierry Gaude Current Opinion in Cell Biology, 2002 Article dans une revue hal-01926798v1
Intrahaplotype polymorphism at the Brassica S locus Cecile Miege,V. Ruffio-Châble,M.H. Schierup,D. Cabrillac,C. Dumaset al. Genetics, 2001, 159, pp.811-822 Article dans une revue hal-02674927v1
Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response Vincent Vanoosthuyse,Christine Miege,Christian Dumas,J. Mark Cock Plant Molecular Biology Reporter, 2001, 46, pp.17 - 34. ⟨10.1023/a:1010664704926⟩ Article dans une revue hal-01926539v1
Further analysis of the interactions between the Brassica S receptor kinase and three interacting proteins (ARC1, THL1 and THL2) in the yeast two-hybrid system Maria Mazzurco,Waheeda Sulaman,Helen Elina,J. Mark Cock,Daphne R Goring Plant Molecular Biology Reporter, 2001, 45, pp.365 - 376 Article dans une revue hal-01926525v1
Intrahaplotype Polymorphism at the Brassica S Locus Christine Miege,Véronique Ruffio-Châble,Mikkel H Schierup,Didier Cabrillac,Christian Dumaset al. Genetics, 2001, 159 (2), pp.811-822 Article dans une revue hal-01925589v1
A Large Family of Genes That Share Homology with CLAVATA3 J. Mark Cock,Sheila Mccormick Plant Physiology, 2001 Article dans une revue hal-01925591v1
The S-locus receptor kinase is inhibited by thioredoxins and activated by pollen coat proteins Didier Cabrillac,J. Mark Cock,Christian Dumas,Thierry Gaude Nature, 2001, 410, pp.220-223. ⟨10.1038/35065626⟩ Article dans une revue hal-01925586v1
The integral membrane S-locus receptor kinase of Brassica has serinethreonine kinase activity in a membranous environment and spontaneously forms oligomers in planta Jean-Loïc Giranton,Christian Dumas,J. Mark Cock,T. Gaude Proceedings of the National Academy of Sciences of the United States of America, 2000, 97 (7), pp.3759-3764. ⟨10.1073/pnas.97.7.3759⟩ Article dans une revue hal-01926568v1
Investigating the molecular mechanism of the self-incompatility response in Brassica J. Mark Cock,D. Cabrillac,J.L. Giranton,Martine Pastuglia,V. Ruffio-Châbleet al. Annals of Botany, 2000, 85 (sp.), n.p Article dans une revue hal-02695604v1
Investigating the Molecular Mechanism of the Self-incompatibility Response in Brassica J. Mark Cock,Didier Cabrillac,C Giranton,Martine Pastuglia,Veronique Ruffio-Chableet al. Annals of Botany, 2000, 85, pp.147 - 153. ⟨10.1006/anbo.1999.1042⟩ Article dans une revue hal-01926783v1
The S 15 Self-Incompatibility Haplotype in Brassica oleracea Includes Three S Gene Family Members Expressed in Stigmas Didier Cabrillac,Valérie Delorme,Jérôme Garin,Véronique Ruffio-Châble,Jean-Loïc Girantonet al. The Plant cell, 1999, 11, pp.971 - 986. ⟨10.1105/tpc.11.5.971⟩ Article dans une revue hal-01926532v1
Identification of a gene linked to the Brassica S (self-incompatibility) locus by differential display Christine Miege,Christian Dumas,J. Mark Cock Comptes rendus de l’Académie des sciences. Série III, Sciences de la vie, 1999, 322 (12), pp.1051-1060. ⟨10.1016/s0764-4469(99)00104-3⟩ Article dans une revue istex hal-01926536v1
Cell cycle regulation of expression of nuclear gene(s) encoding chloroplastic, ammonium-inducible glutamate dehydrogenases in Chlorella sorokiniana. Robert R. Schmidt,J. Mark Cock Cell and Tissue Kinetics, 1998 Article dans une revue hal-03086451v1
The molecular mechanism of self-incompatibility in Brassica: recent advances J.L. Giranton,Martine Pastuglia,C. Dumas,Thierry Gaude,J. Mark Cock Acta Agronomica Hungarica, 1998, 46 (4), pp.431-438 Article dans une revue hal-02693667v1
Rapid lnduction by Wounding and Bacterial Infection of an S Gene Family Receptor-like Kinase Gene in Brassica oleracea Martine Pastuglia,Dominique Roby,Christian Dumas,J. Mark Cock The Plant cell, 1997, 9, pp.49-60. ⟨10.1105/tpc.9.1.49⟩ Article dans une revue hal-01926645v1
Natural antisense transcripts of the S locus receptor kinase gene and related sequences in Brassica oleracea J. Mark Cock,Swarup Ranjan,Dumas Christian Molecular and General Genetics MGG, 1997, 255 (5), pp.514-524. ⟨10.1007/s004380050524⟩ Article dans une revue istex hal-01926580v1
A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea. Martine Pastuglia,Véronique Ruffio-Châble,Valérie Delorme,Thierry Gaude,Christian Dumaset al. The Plant cell, 1997, 9 (11), pp.2065-2076. ⟨10.1105/tpc.9.11.2065⟩ Article dans une revue hal-01926573v1
Natural antisense transcripts of the S locus receptor kinase gene and related sequences in Brassica oleracea J. Mark Cock,Ranjan Swarup,C. Dumas Molecular and General Genetics MGG, 1997, 255, pp.514-524 Article dans une revue hal-02698185v1
A new class of receptor-like protein kinase gene from Arabidopsis thaliana possessing a domain with similarity to plant lectin genes (EMBL accession number X95909) Ranjan Swarup,C. Dumas,J. Mark Cock Plant Physiology, 1996, 111, pp.347-348 Article dans une revue hal-02689478v1
The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SRK extracellular domain in Brassica oleracea J.L. Giranton,M.J. Ariza,C. Dumas,J. Mark Cock,Thierry Gaude The Plant Journal, 1995, 8 (6), pp.827-834 Article dans une revue hal-02705476v1
PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis Christian Breton,Annie Chaboud,Elisabeth Matthys-Rochon,Elizabeth E M Bates,J. Mark Cocket al. Plant Molecular Biology Reporter, 1995, 27 (1), pp.105 - 113. ⟨10.1007/BF00019182⟩ Article dans une revue istex hal-01926680v1
S-locus glycoproteins are expressed along the path of pollen tubes in Brassica pistils Chantai Kleman-Mariac,Mireille Rougier,J. Mark Cock,Thierry Gaude,Christian Dumas Planta, 1995, 196 (3), pp.614-621. ⟨10.1007/BF00203663⟩ Article dans une revue istex hal-01926677v1
S-locus glycoproteins are expressed along the path of pollen tubes in Brassica pistils C. Kleman-Mariac,M. Rougier,J. Mark Cock,Thierry Gaude,C. Dumas Planta, 1995, 196, pp.614-621 Article dans une revue hal-02708694v1
SLR3: a modified receptor kinase gene that has been adapted to encode a putative secreted glycoprotein similar to the S locus glycoprotein J. Mark Cock,Borislav Stanchev,Valérie Delorme,Ronald R. D. Croy,Christian Dumas MGG Molecular & General Genetics, 1995, 248, pp.151-161 Article dans une revue hal-01926671v1
Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene Valérie Delorme,J.L. Giranton,Yves Hatzfeld,A. Friry,P. Heizmannet al. The Plant Journal, 1995, 7 (3), pp.429-440 Article dans une revue hal-02704966v1
PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis C. Breton,Annie Chaboud,E. Matthys-Rochon,E.E.M. Bates,J. Mark Cocket al. Plant Molecular Biology, 1995, 27, pp.105-113 Article dans une revue hal-02714706v1
PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis. C. Breton,A. Chaboud,E. Matthys-Rochon,Ee Bates,Jm Cocket al. Plant Molecular Biology, 1995, 27, pp.105-113 Article dans une revue hal-00314514v1
The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SKR extracellular domain in Brassica oleracea. Jean-Loïc Giranton,Maria José Ariza,Christain Dumas,J. Mark Cock,Thierry Gaude The Plant Journal, 1995, 8 (6), pp.827-834. ⟨10.1046/j.1365-313X.1995.8060827.x⟩ Article dans une revue hal-01926654v1
Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene Valerie Delorme,Jean-Loic Giranton,Yves Hatzfeld,Aline Friry,Philippe Heizmannet al. The Plant Journal, 1995, 7 (3), pp.429-440. ⟨10.1046/j.1365-313x.1995.7030429.x⟩ Article dans une revue hal-03086441v1
Characterization of the gene encoding the plastid-located glutamine synthetase of Phaseolus vulgaris: regulation of B-glucuronidase gene fusions in transgenic tobacco J. Mark Cock,P. Hemon,Julie Vera Cullimore Plant Molecular Biology, 1992, 18, pp.1141-1149 Article dans une revue hal-02701710v1
Characterization of the gene encoding the plastid-located glutamine synthetase of Phaseolus vulgaris: regulation of/-glucuronidase gene fusions in transgenic tobacco J. Mark Cock,Pascale Hémon,Julie V Cullimore Plant Molecular Biology Reporter, 1992, 18, pp.1141 - 1149 Article dans une revue hal-01926686v1
A nuclear gene with many introns encoding ammonium-inducible chloroplastic NADP-specific glutamate dehydrogenase(s) in Chlorella sorokiniana J. Mark Cock,Kyu Don Kim,Philip H. Miller,Richard G Hutson,Robert R Schmidt Plant Molecular Biology Reporter, 1991, 17, pp.1023 - 1044 Article dans une revue hal-01926702v1
Enzymes depending on the pterin molybdenum cofactor: sequence families, spectroscopic properties of molybdenum and possible cofactor-binding domains John C Wootton,Rachel E Nicolson,J. Mark Cock,Dawn E Waiters,Julian F Burkeet al. BBA - Biochimica et Biophysica Acta, 1991, 1057, pp.157 - 185 Article dans une revue hal-01926852v1
Regulation of glutamine synthetase genes in leaves of Phaseolus vulgaris J. Mark Cock,Ian W Brock,Adam T Watson,Ranjan Swarup,Andrew P Morbyet al. Plant Molecular Biology Reporter, 1991, 17, pp.761 - 771 Article dans une revue hal-01926699v1
A nitrate reduetase gene of the cyanobacterium Synechococcus PCC6301 inferred by heterologous hybridization, cloning and targeted mutagenesis D A Lightfoot,a J Baron,J. Mark Cock,J C Wootton Genetica, 1991, 85, pp.107 - 117 Article dans une revue hal-01926694v1
Expression of glutamine synthetase genes in roots and nodules of Phaseolus vulgaris following changes in the ammonium supply and infection with various Rhizobium mutants J. Mark Cock,Ruth M Mould,Malcolm Bennett,Julie V Cullimore Plant Molecular Biology Reporter, 1990, 14, pp.549 - 560 Article dans une revue hal-01926706v1
RESTRICTION ENZYME ANALYSIS AND CLONING OF HIGH MOLECULAR WEIGHT GENOMIC DNA ISOLATED FROM CHLORELLA SOROKINIANA (CHLOROPHYTA) J. Mark Cock,Lori L. Roof,Newell F. Bascomb,Charles W. Gehrke,Kenneth C. Kuoet al. Journal of Phycology, 1990 Article dans une revue hal-01926710v1
A glutamate dehydrogenase gene sequence J. Mark Cock,Robert R Schmidt Nucleic Acids Research, 1989 Article dans une revue hal-01926718v1

Communication dans un congrès (14)

GENetic diversity exploitation of Saccharina latissima for Innovative macro-ALGal biorefinery in Europe Philippe Potin,Zofia Nehr,Paolo Ruggeri,Komlan Avia,Stéphane Maugeret al. 23rd International Seaweed Symposium, Apr 2019, Jeju, South Korea Communication dans un congrès hal-02947585v1
Genetic Tools For The Development Of Improved Cultivars Of Saccharina latissima Zofia Nehr,Komlan Avia,Stéphane Mauger,Bertrand Jacquemin,Émilie Gouhieret al. 23rd International Seaweed Symposium, Apr 2019, Jeju, North Korea Communication dans un congrès hal-02947582v1
Genetic diversity in the UV sex chromosomes of the brown alga Ectocarpus Komlan Avia,Agnieszka P. Lipinska,Laure Mignerot,Gabriel J Montecinos,M. Jamyet al. GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France Communication dans un congrès hal-02947586v1
Towards a genetic map for the brown alga Saccorhiza polyschides Svenja Heesch,Ga Youn Cho,Akira F. Peters,Gildas Le Corguillé,Cyril Falentinet al. German Botanical Society (DBG) meeting, Mar 2018, Berchtesgaden, Germany Communication dans un congrès hal-02947599v1
UV sex chromosome evolution in seaweeds Agnieszka P. Lipinska,Nicholas Toda,Svenja Heesch,Laure Mignerot,Komlan Aviaet al. Population Genetics Group meeting, Jan 2017, Cambridge, United Kingdom Communication dans un congrès hal-02947589v1
QTL mapping in the model brown alga Ectocarpus Komlan Avia,Susana M. Coelho,Gabriel J Montecinos,Alexandre Cormier,Fiona Lercket al. 8th annual meeting EFOR network, session " Genomic, evolution and adaptation", May 2017, Paris, France Communication dans un congrès hal-02947618v1
QTL mapping of stress related traits in &lt;em&gt;Ectocarpus&lt;/em&gt; Komlan Avia,Susana M. Coelho,Gabriel J Montecinos,Alexandre Cormier,Fiona Lercket al. 5th annual meeting of the GDR MarCo « Marine Connectivity », Oct 2015, Montpellier, France Communication dans un congrès hal-02947466v1
QTL mapping of stress related traits in the model brown alga Ectocarpus sp Komlan Avia,Susana M. Coelho,Gabriel J Montecinos,Alexandre Cormier,Fiona Lercket al. Journées phycologiques de la société phycologique de France, Sep 2015, Vannes, France Communication dans un congrès hal-02947470v1
Nature, nurture and the structure of macroalgal genomes J. Mark Cock,Jonas Collen,Lieven Sterck,Pierre Rouzé,Delphine Scornetet al. 5. European Phycological Congress, Sep 2011, Rhodes, Greece Communication dans un congrès hal-02749757v1
Genomic analysis of economically important seaweeds J. Mark Cock,Catherine Leblanc,C Colin,Jonas Collén,Vincent Roederet al. Marine Biotechnology Congress, 2004, Chiba, Japan Communication dans un congrès hal-03447105v1
Parfum de rose Sylvie Baudino,Véronique Bergougnoux,Jean Louis Magnard,F. Jullien,Jean Claude Caissardet al. Jardins de France, 2003, Lyon, France Communication dans un congrès hal-03447141v1
Protéines membranaires dans les interactions pollen-pistil Thierry Gaude,Jean-Loic Giranton,J. Mark Cock,Christian Dumas Ecole Thématique “Biologie Végétale”, Les Protéines des Membranes Végétales, Les Houches, France., 1997, Les Houches, France Communication dans un congrès hal-03447188v1
The S locus receptor kinase and the self-incompatibility response in Brassica Jean-Loic Giranton,Valerie Delorme,Martine Pastuglia,M.J. Ariza,Dumas Christianet al. Protein Phosphorylation in Plants, 2nd European Symposium, 1997, Lyon, France Communication dans un congrès hal-03447183v1
Regulation of expression of the gln-g gene of Phaseolus vulgaris L.. J. Mark Cock,J.V. Cullimore,K.J.F. Farnden,M.J. Bennett Proceedings of the 8th International Symposium of Nitrogen Fixation, Knoxville, Tennessee, 1990, Knoxville, United States Communication dans un congrès hal-03447215v1

Poster de conférence (6)

A key role for UV sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus Laure Mignerot,Komlan Avia,Rémy Luthringer,Agnieszka P. Lipinska,Akira F Peterset al. GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France. 2019 Poster de conférence hal-02947591v1
Characterisation of brown alga mutants indicates deep evolutionary origins of life cycle regulatory pathways J. Mark Cock,Alok Arun,Olivier Godfroy,Agnieszka P. Lipinska,Delphine Scornetet al. Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018 Poster de conférence hal-02947597v1
Genetic and cellular characterization of parthenogenesis in the brown alga Ectocarpus Laure Mignerot,Rémy Luthringer,Komlan Avia,Agnieszka P. Lipinska,J. Mark Cocket al. Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018 Poster de conférence hal-02947598v1
Towards the developpement of improved cultivars of Saccharina latissima for large-scale cultivation Zofia Nehr,Ousseini Issaka-Salia,Bertrand Jacquemin,Komlan Avia,Stéphane Maugeret al. Tjarno International Seaweed Conference 2018, Jun 2018, Tjarno, Sweden. 2018 Poster de conférence hal-02947594v1
Studying temperature and salinity stresses in the model brown alga Ectocarpus sp. by QTL mapping Komlan Avia,Susana M. Coelho,Alexandre Cormier,Fiona Lercker,Stéphane Maugeret al. 5th International Conference on Quantitative Genetics, Jun 2016, Madison, United States. 2016 Poster de conférence hal-02947471v1
QTL mapping of stress related traits in the model brown alga Ectocarpus Komlan Avia,Fiona Lerck,Stéphane Mauger,Susana M. Coelho,Pierre Boudryet al. 15. Congress of the European Society for Evolutionary Biology (ESEB 2015), Aug 2015, Lausanne, Switzerland. , 2015 Poster de conférence hal-02947467v1

Ouvrages (1)

Genetic and developmental mechanisms of cellular differentiation in algae. In: The Evolution of Multicellularity. Matthew D. Herron, Peter Conlin, and William C. Ratcliff. (eds) Evolutionary Cell Biology series Susana M. Coelho,J. Mark Cock CRC Press, 1, 2022, ⟨10.1201/9780429351907⟩ Ouvrages hal-03814810v1

Chapitre d'ouvrage (8)

Genetic and Developmental Mechanisms of Cellular Differentiation in Algae Susana Coelho,J. Mark Cock Matthew D. Herron; Peter L. Conlin; William C. Ratcliff. The Evolution of Multicellularity, 1, CRC Press, pp.301-324, 2022, 9780429351907. ⟨10.1201/9780429351907-19⟩ Chapitre d'ouvrage hal-03671226v1
Alternation of Generations in Plants and Algae Simon Bourdareau,Laure Mignerot,Svenja Heesch,Akira Peters,Susana Coelhoet al. Evolutionary Developmental Biology, Springer International Publishing, pp.1-14, 2017, ⟨10.1007/978-3-319-33038-9_58-1⟩ Chapitre d'ouvrage hal-03443575v1
Independent Emergence of Complex Multicellularity in the Brown and Red Algae J. Mark Cock,Jonas Collén Evolutionary Transitions to Multicellular Life, 2, Springer Netherlands, pp.335-361, 2015, Advances in Marine Genomics, ⟨10.1007/978-94-017-9642-2_16⟩ Chapitre d'ouvrage hal-03443521v1
Emergence of Ectocarpus as a Model System to Study the Evolution of Complex Multicellularity in the Brown Algae J. Mark Cock,Olivier Godfroy,Martina Strittmatter,Delphine Scornet,Toshiki Ujiet al. Evolutionary Transitions to Multicellular Life, 2, Springer Netherlands, pp.153-162, 2015, Advances in Marine Genomics, ⟨10.1007/978-94-017-9642-2_8⟩ Chapitre d'ouvrage hal-03443554v1
Genomics of Marine Algae Susana Coelho,Svenja Heesch,Nigel Grimsley,Hervé Moreau,J. Mark Cock Introduction to Marine Genomics, Springer Netherlands, pp.179-211, 2010, ⟨10.1007/978-90-481-8639-6_6⟩ Chapitre d'ouvrage hal-03443342v1
Marine Genomics and the Exploration of Marine Biodiversity J. Mark Cock,Delphine Scornet,Susana M. Coelho,Bénédicte Charrier,Catherine Boyenet al. Duatre, C.M. The exploration of Marine Biodiversity, 117-141, BBVA Foundation, Bilbao, Spain, 2006, 84-96515-27-3 Chapitre d'ouvrage hal-03443467v1
Model Plants and Functional Genomic Approaches Applied to the Characterization of Genes Involved in Floral Scent Biosynthesis Gabriel Scalliet,Sylvie Baudino,J. Mark Cock,Philippe Hugueney Floriculture, ornamental and plant biotechnology: advances and topical issue, 2006 Chapitre d'ouvrage hal-03441707v1
Inducibility of the glutamine synthetase gene family of Phaseolus vulgaris L. Julie Vera Cullimore,J. Mark Cock,T.J. Daniell,Ranjan Swarup,M.J. Benett Society for Experimental Biology Seminar series 49, Cambridge University Press, 1992 Chapitre d'ouvrage hal-02846612v1

Brevet (1)

Marqueur de résistance à Sclerotinia sclerotiorum Saïd S. Mouzeyar,Laurent Gentzbittel,S. Badaoui,Emmanuelle Bret-Mestries,A Perraultet al. France, Patent n° : 97 03696. 1997 Brevet hal-03446701v1

Pré-publication, Document de travail (6)

Life-cycle-related gene expression patterns in the brown algae Pélagie Ratchinski,Olivier Godfroy,Benjamin Noel,Jean-Marc Aury,J. Mark Cock 2025 Pré-publication, Document de travail hal-05069723v1
Origin and evolutionary trajectories of brown algal sex chromosomes Josué Barrera-Redondo,Agnieszka Lipinska,Pengfei Liu,Erica Dinatale,Guillaume Cossardet al. 2024 Pré-publication, Document de travail hal-04453200v1
Role of transcription and translation during the early development of the brown alga Ectocarpus Daniel Liesner,Rémy Luthringer,Sébastien Colin,Julia Morales,J. Mark Cocket al. 2024 Pré-publication, Document de travail hal-04774450v1
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics Ann M Mc Cartney,Giulio Formenti,Alice Mouton,Diego de Panis,Luísa S Marinset al. 2024 Pré-publication, Document de travail hal-04406124v1
Chromosome-level quality scaffolding of brown algal genomes using InstaGRAAL, a proximity ligation-based scaffolder Lyam Baudry,Martial Marbouty,Hervé Marie-Nelly,Alexandre Cormier,Nadège Guiglielmoniet al. 2021 Pré-publication, Document de travail hal-02947625v1
Convergent recruitment of life cycle regulators to direct sporophyte development in two eukaryotic supergroups Alok Arun,Susana Coelho,Akira F Peters,Simon Bourdareau,Laurent Pereset al. 2018 Pré-publication, Document de travail hal-01925062v1

Rapport (5)

Generation of genotype and phenotype data for Saccharina latissima strains J.Mark Cock,Zofia Nehr,Philippe Potin Deliverable D1.2, Station Biologique de Roscoff. 2023 Rapport (rapport contrat/projet) hal-05546324v1
Application of QTL and GWAS approaches in Saccharina latissima Zofia Nehr,Paolo Ruggeri,Komlan Avia,Lucie Jaugeon,Marie-Mathilde Perrineauet al. Deliverable D2.3, Station Biologique de Roscoff. 2021 Rapport (rapport contrat/projet) hal-05546359v1
Biobanking of novel S. latissima strains with characters of interest for biomass production Paolo Ruggeri,Lucie Jaugeon,Julien Dhinaut,Jaromir Guzinski,Antoine Fortet al. GENIALG Deliverable D2.2, Station Biologique de Roscoff. 2021 Rapport (rapport contrat/projet) hal-05559266v1
Position paper “Scientific Challenges”. Meeting between the European Union Networks of Excellence: Eur-Oceans, Marine Genomics Europe and MarBEF; Working Group 1. J. Mark Cock,D Paterson,Paul Tréguer,P Wassman [0] Gatty Marine Laboratory, St Andrews, Scotland. 2006 Rapport hal-03446760v1
The Ectocarpus genome project. Report from the EU-US workshop on genomic approaches for studying the marine environment and resources J. Mark Cock,Catherine Boyen [0] Max Planck Institute of Marine Microbiology, Bremen, Germany. 2005 Rapport hal-03446763v1

Thèse (1)

Nitrate reductase genes from a range of bacteria J. Mark Cock Life Sciences [q-bio]. University of Leeds, 1985. English. ⟨NNT : ⟩ Thèse tel-03446714v1