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The influence of native populations' genetic history on the reconstruction of invasion routes: the case of a highly invasive aquatic species
Thomas Brazier
,
Emira Cherif
,
Jean-François Martin
,
André Gilles
,
Simon Blanchet
et al.
Article dans une revue
hal-03656986v1
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Breaking the reproductive barrier of divergent species to explore the genomic landscape
A. Gilles
,
Y. Thevenin
,
F. Dione
,
Jean-François Martin
,
B. Barascud
et al.
Article dans une revue
hal-03825029v1
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Divergent gut microbiota in two closely related house mouse subspecies under common garden conditions
Barbora Bendová
,
Ondřej Mikula
,
Barbora Vošlajerová Bímová
,
Dagmar Čížková
,
Kristina Daniszová
et al.
Article dans une revue
hal-03768251v1
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Early Detection of the Root-Knot Nematode Meloidogyne hapla Through Developing a Robust Quantitative PCR Approach Compliant With the Minimum Information for Publication of Quantitative Real-Time PCR Experiments Guidelines
Johannes Tavoillot
,
Thierry Mateille
,
Nadine Ali
,
Anne-Marie Chappé
,
Jean-François Martin
Article dans une revue
hal-03374345v1
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An innovative approach combining metabarcoding and ecological interaction networks for selecting candidate biological control agents
Mélodie Ollivier
,
Vincent Lesieur
,
Johannes Tavoillot
,
Fanny Bénetière
,
Marie-Stéphane M.-S. Tixier
et al.
Article dans une revue
hal-03695123v1
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Towards unravelling the Rosette agent enigma: Spread and emergence of the co-invasive host-pathogen complex, Pseudorasbora parva-Sphaerothecum destruens
Combe Marine
,
Emira Cherif
,
Amélie Charrier
,
Bruno Barbey
,
Martine Chague
et al.
Article dans une revue
hal-03845528v1
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Trait differentiation between native and introduced populations of the invasive plant Sonchus oleraceus L. (Asteraceae)
Mélodie Ollivier
,
Elena Kazakou
,
Maxime Corbin
,
Kevin Sartori
,
Ben Gooden
et al.
Article dans une revue
hal-02562275v1
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How being synanthropic affects the gut bacteriome and mycobiome: comparison of two mouse species with contrasting ecologies
Barbora Bendová
,
Jaroslav Piálek
,
Ľudovít Ďureje
,
Lucie Schmiedová
,
Dagmar Čížková
et al.
Article dans une revue
hal-02908216v1
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Characterising ecological interaction networks to support risk assessment in classical biological control of weeds
Mélodie Ollivier
,
Vincent Lesieur
,
Sathyamurthy Raghu
,
Jean-François Martin
Article dans une revue
(article de synthèse)
hal-02622752v2
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Oral and vaginal microbiota in selected field mice of the genus Apodemus: a wild population study
Tereza Matějková
,
Petra Hájková
,
Romana Stopková
,
Michal Stanko
,
Jean-François Martin
et al.
Article dans une revue
hal-04948076v1
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Gut microbiota in a host–brood parasite system: insights from common cuckoos raised by two warbler species
Lucie Schmiedová
,
Jakub Kreisinger
,
Milica Požgayová
,
Marcel Honza
,
Jean-François Martin
et al.
Article dans une revue
hal-02975154v1
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Long-fragment targeted capture for long-read sequencing of plastomes
Kevin Bethune
,
Cédric Mariac
,
Marie Couderc
,
Nora Scarcelli
,
Sylvain Santoni
et al.
Article dans une revue
hal-02620804v1
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Implications of a phylogeographic approach for the selection of Ceutorhynchus assimilis as a potential biological control agent for Lepidium draba
Vincent Lesieur
,
Jean-François Martin
,
Hinz L Hariet
,
Boris B. Fumanal
,
Sobhian Rouhollah
et al.
Article dans une revue
hal-02270252v1
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Fecal microbiota associated with phytohaemagglutinin-induced immune response in nestlings of a passerine bird
Jakub Kreisinger
,
Lucie Schmiedová
,
Adéla Petrželková
,
Oldřich Tomášek
,
Marie Adamkova
et al.
Article dans une revue
hal-02270244v1
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Microbiota Diversity Within and Between the Tissues of Two Wild Interbreeding Species
Emmanuel Guivier
,
Jean-François Martin
,
Nicolas Pech
,
Arnaud Ungaro
,
Rémi Chappaz
et al.
Article dans une revue
hal-02270253v1
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A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies
Emmanuel Corse
,
Emese Meglécz
,
Gait Archambaud
,
Morgane Ardisson
,
Jean-François Martin
et al.
Article dans une revue
hal-01681595v1
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DNA Metabarcoding of Amazonian Ichthyoplankton Swarms
M.E. Maggia
,
Y. Vigouroux
,
J.-F. Renno
,
F. Duponchelle
,
E. Desmarais
et al.
Article dans une revue
hal-01470522v1
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Variation between the oral and faecal microbiota in a free-living passerine bird, the great tit (Parus major)
Lucie Kropáčková
,
Hana Pechmanová
,
Michal Vinkler
,
Jana Svobodová
,
Hana Velová
et al.
Article dans une revue
hal-02336539v2
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Challenges and advances for transcriptome assembly in non-model species
Arnaud Ungaro
,
Nicolas Pech
,
Jean-François Martin
,
R. J. Scott Mccairns
,
Jean-Philippe Mévy
et al.
Article dans une revue
hal-01681642v1
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Temporal Stability and the Effect of Transgenerational Transfer on Fecal Microbiota Structure in a Long Distance Migratory Bird
Lucie Kropackova
,
Adela Petrzelkova
,
Oldrich Tomasek
,
Tomas Albrecht
,
Clarissa Schwab
et al.
Article dans une revue
hal-01600971v1
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Development and characterization of 11 microsatellite markers in the root-gall-forming weevil, Ceutorhynchus assimilis (Coleoptera: Curculionidae)
Vincent Lesieur
,
M. Jeanneau
,
Jean-François Martin
,
Marie-Claude Bon
Article dans une revue
hal-01601364v1
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Phylogeography of the Wheat Stem Sawfly, Cephus cinctus Norton (Hymenoptera: Cephidae): Implications for Pest Management
Vincent Lesieur
,
Jean-François Martin
,
David Weaver
,
Kim A Hoelmer
,
David Smith
et al.
Article dans une revue
hal-02336540v1
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New set of microsatellite markers for the spotted-wing <em>Drosophila suzukii</em> (Diptera: Drosophilidae): a promising molecular tool for inferring the invasion history of this major insect pest
Anne Fraimout
,
Anne Loiseau
,
Donald K. Price
,
Anne Xuéreb
,
Jean-François Martin
et al.
European Journal of Entomology, 2015, 112, pp.855-859
Article dans une revue
hal-02631599v1
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Cover Cropping Alters the Diet of Arthropods in a Banana Plantation: A Metabarcoding Approach
Grégory Mollot
,
Pierre-François Duyck
,
Pierre Lefeuvre
,
Francoise Lescourret
,
Jean-François Martin
et al.
Article dans une revue
hal-01189949v1
|
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QDD version 3.1: a user-friendly computer program for microsatellite selection and primer design revisited: experimental validation of variables determining genotyping success rate
Emese Meglécz
,
Nicolas Pech
,
André Gilles
,
Vincent Dubut
,
Pascal Hingamp
et al.
Article dans une revue
istex
hal-02356473v1
|
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A shot in the genome: how accurately do shotgun 454 sequences represent a genome?
Emese Meglécz
,
Nicolas Pech
,
André Gilles
,
Jean-François Martin
,
Michael G Gardner
Article dans une revue
hal-02356481v1
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|SE|S|AM|E| Barcode: NGS-oriented software for amplicon characterization - application to species and environmental barcoding
Sylvain Piry
,
Emmanuel Guivier
,
A. Realini
,
Jean-François Martin
Article dans une revue
istex
hal-01506133v1
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Discongruence of Mhc and cytochrome b phylogeographical patterns in Myodes glareolus (Rodentia: Cricetidae)
Pierre-Jean G. Male
,
Jean-François Martin
,
Maxime Galan
,
Valérie Deffontaine
,
Josef Bryja
et al.
Article dans une revue
hal-01506086v1
|
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Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing
André Gilles
,
Emese Meglécz
,
Nicolas Pech
,
Stéphanie Ferreira
,
Thibaut Malausa
et al.
Article dans une revue
hal-01995051v1
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High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries
Thibaut Malausa
,
André Gilles
,
Emese Meglécz
,
Hélène Blancard
,
Stéphanie Duthoy
et al.
Article dans une revue
hal-01506135v1
|
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SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing
Emese Meglécz
,
Sylvain Piry
,
Erick Desmarais
,
Maxime Galan
,
André Gilles
et al.
Article dans une revue
hal-02356496v1
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|
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Social immunity in honeybees (Apis mellifera): transcriptome analysis of varroa-hygienic behaviour
Yves Le Conte
,
Cédric Alaux
,
Jean-François Martin
,
J.R. Harbo
,
J.W. Harris
et al.
Article dans une revue
istex
hal-02651805v1
|
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A PCR-based method for diet analysis in freshwater organisms using rDNA barcoding on faeces
Emmanuel Corse
,
Caroline Costedoat
,
Rémi Chappaz
,
Nicolas Pech
,
Jean-François Martin
et al.
Article dans une revue
istex
hal-02666530v1
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|
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Representativeness of microsatellite distributions in genomes, as revealed by 454 GS-FLX Titanium pyrosequencing
Jean-François Martin
,
Nicolas Pech
,
Emese Meglécz
,
Stéphanie Ferreira
,
Caroline Costedoat
et al.
Article dans une revue
hal-02663878v1
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|
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QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects
Emese Meglécz
,
Caroline Costedoat
,
Vincent Dubut
,
André Gilles
,
Thibaut Malausa
et al.
Article dans une revue
(data paper)
hal-02667917v1
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Cross-species amplification of 41 microsatellites in European cyprinids: A tool for evolutionary, population genetics and hybridization studies
Vincent Dubut
,
Melthide Sinama
,
Jean-François Martin
,
Emese Meglécz
,
Juliette Fernandez
et al.
BMC Research Notes, 2010, 3
Article dans une revue
hal-01933480v1
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Development of 55 novel polymorphic microsatellite loci for the critically endangered L. (Actinopterygii: Perciformes: Percidae) and cross-species amplification in five other percids
Vincent Dubut
,
Rémi Grenier
,
Emese Meglécz
,
Rémi Chappaz
,
Caroline Costedoat
et al.
Article dans une revue
hal-00609749v1
|
|
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Isolation and characterization of polymorphic microsatellite loci for the dace complex: Leuciscus leuciscus (Teleostei: Cyprinidae)
Vincent Dubut
,
Jean-François Martin
,
André Gilles
,
Jeroen van Houdt
,
Rémi Chappaz
et al.
Article dans une revue
istex
hal-02668219v1
|
|
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Isolation and characterization of microsatellites in the harlequin ladybird Harmonia axyridis (Coleoptera, Coccinellidae) and cross-species amplification within the family Coccinellidae
Anne Loiseau
,
Thibaut Malausa
,
Eric Lombaert
,
Jean-François Martin
,
Arnaud Estoup
Article dans une revue
istex
hal-02657463v1
|
|
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PCR-based amplification and analysis of specific viral sequences from individual plant cells
Michel Yvon
,
Baptiste Monsion
,
Jean-François Martin
,
Serafin Gutierrez
,
Stéphane Blanc
Article dans une revue
istex
hal-02659449v1
|
|
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Isolation and characterization of polymorphic microsatellite loci in the freshwater fishes Telestes souffiai and Telestes multicellus (Teleostei: Cyprinidae)
Vincent Dubut
,
Jean-François Martin
,
Caroline Costedoat
,
Rémi Chappaz
,
André Gilles
Article dans une revue
istex
hal-02662471v1
|
|
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Isolation, characterization and PCR multiplexing of polymorphic microsatellite markers in the edible dormouse, Glis glis
H. Hürner
,
Jean-François Martin
,
Alexis Ribas
,
A. Arrizabalaga
,
Johan Michaux
Article dans une revue
hal-02664681v1
|
|
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Eight polymorphic microsatellite loci for the Australian plague locust, Chortoicetes terminifera
Marie Pierre Chapuis
,
Julie-Anne Popple
,
Stephen J. Simpson
,
Arnaud Estoup
,
Jean-François Martin
et al.
Article dans une revue
istex
hal-02663921v1
|
|
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Phylogeny of the genus Aphis Linnaeus, 1758 (Homoptera: Aphididae) inferred from mitochondrial DNA sequences.
Armelle Coeur d'Acier
,
Emmanuelle Jousselin
,
Jean-François Martin
,
Jean Yves Rasplus
Article dans une revue
istex
hal-02657391v1
|
|
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Molecular differentiation at nuclear loci in French host races of the European corn borer (Ostrinia nubilalis)
Thibaut Malausa
,
Laurianne Leniaud
,
Jean-François Martin
,
Philippe Audiot
,
Denis D. Bourguet
et al.
Article dans une revue
hal-02657299v1
|
|
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Distinct Viral Populations Differentiate and Evolve Independently in a Single Perennial Host Plant
Chiraz Jridi
,
Jean-François Martin
,
Véronique Marie-Jeanne
,
Gerard Labonne
,
Stéphane Blanc
Article dans une revue
hal-02663726v1
|
|
|
Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish.
Eva Ottová
,
Andrea Simková
,
Jean-François Martin
,
Joëlle Goüy de Bellocq
,
Milan Gelnar
et al.
Article dans une revue
istex
hal-00104518v1
|
|
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High through-put characterization of insect morphocryptic entities by a non-invasive method using direct-PCR of fecal DNA
Boris Fumanal
,
Jean-François Martin
,
M. Bon
Article dans une revue
istex
hal-03091853v1
|
|
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Host range of Ceutorhynchus assimilis (Coleoptera: Curculionidae), a candidate for biological control of Lepidium draba (Brassicaceae) in the USA
Boris Fumanal
,
Jean-François Martin
,
Rouhollah Sobhian
,
Arnaud Blanchet
,
Marie-Claude Bon
Article dans une revue
istex
hal-03091849v1
|