Jean Peccoud

Publications

Article dans une revue (46)

Within‐Host Environmental Heterogeneity Is Associated With Phenotypic but Not Genomic Diversity in Wolbachia Endosymbionts Romain Pigeault,Yann Dussert,Raphaël Jorge,Theo Ulve,Marie Panzaet al. Environmental Microbiology Reports, 2026, 18 (1), pp.e70286. ⟨10.1111/1758-2229.70286⟩ Article dans une revue hal-05517376v1
STRyper: A macOS application for microsatellite genotyping and chromatogram management Jean Peccoud PLoS ONE, 2025, 20 (2), pp.e0318806. ⟨10.1371/journal.pone.0318806⟩ Article dans une revue hal-04963201v1
The genetics of host plant acceptance in pea aphids Isobel Eyres,Hannah Fenton,Jean-Christophe Simon,Jean Peccoud,Julia Ferrariet al. Molecular Ecology, 2025, 34 (21), pp.e17795. ⟨10.1111/mec.17795⟩ Article dans une revue hal-05156900v2
Phylogenetic relatedness rather than aquatic habitat fosters horizontal transfer of transposable elements in animals Héloïse Muller,Rosina Savisaar,Jean Peccoud,Sylvain Charlat,Clément Gilbert Genome Research, 2025, 35, pp.1-12. ⟨10.1101/gr.280432.125⟩ Article dans une revue hal-04899724v2
Identification of a sex-determining region potentially involved in resolving genetic conflicts over sex ratio Baptiste Lhéraud,Yann Dussert,Mohamed Amine Chebbi,Isabelle Giraud,Richard Cordauxet al. Biology Letters, 2025, 21 (10), pp.0287. ⟨10.1098/rsbl.2025.0287⟩ Article dans une revue hal-05325843v1
Temporal stability of sex ratio distorter prevalence in natural populations of the isopod Armadillidium vulgare Sylvine Durand,Romain Pigeault,Isabelle Giraud,Anaïs Loisier,Nicolas Bechet al. Heredity, 2024, 133 (5), pp.287-297. ⟨10.1038/s41437-024-00713-1⟩ Article dans une revue hal-04684140v1
Contrasting Evolutionary Patterns Between Sexual and Asexual Lineages in a Genomic Region Linked to Reproductive Mode Variation in the pea aphid Maud Rimbault,Fabrice Legeai,Jean Peccoud,Lucie Mieuzet,Elsa Callet al. Genome Biology and Evolution, 2023, 15 (9), pp.evad168. ⟨10.1093/gbe/evad168⟩ Article dans une revue hal-04232477v1
Heterogeneous distribution of sex ratio distorters in natural populations of the isopod Armadillidium vulgare. Sylvine Durand,Baptiste Lheraud,Isabelle Giraud,Nicolas Bech,Frédéric Grandjeanet al. Biology Letters, 2023, 19 (1), pp.20220457. ⟨10.1098/rsbl.2022.0457⟩ Article dans une revue hal-03959969v1
Investigating Wolbachia symbiont-mediated host protection against a bacterial pathogen using a natural Wolbachia nuclear insert Cybèle Prigot-Maurice,Baptiste Lheraud,Samuel Guéritault,Sophie Beltran-Bech,Richard Cordauxet al. Journal of Invertebrate Pathology, 2023, 197, pp.107893. ⟨10.1016/j.jip.2023.107893⟩ Article dans une revue hal-04240965v1
Masculinization of the X-chromosome in aphid soma and gonads Julie Jaquiéry,Jean-Christophe Simon,Stéphanie Robin,Gautier Richard,Jean Peccoudet al. Peer Community Journal, 2022, 2, pp.e53. ⟨10.24072/pcjournal.166⟩ Article dans une revue hal-03999192v1
Characterization of a Sex-Determining Region and Its Genomic Context via Statistical Estimates of Haplotype Frequencies in Daughters and Sons Sequenced in Pools Richard Cordaux,Mohamed Amine Chebbi,Isabelle Giraud,David R.J. Pleydell,Jean Peccoud Genome Biology and Evolution, 2021, 13 (8), ⟨10.1093/gbe/evab121⟩ Article dans une revue hal-03376524v1
Monitoring Insect Transposable Elements in Large Double-Stranded DNA Viruses Reveals Host-to-Virus and Virus-to-Virus Transposition Vincent Loiseau,Jean Peccoud,Clémence Bouzar,Sandra Guillier,Jiangbin Fanet al. Molecular Biology and Evolution, 2021, 38 (9), pp.3512-3530. ⟨10.1093/molbev/msab198⟩ Article dans une revue hal-03376529v1
Occurrence data for the two cryptic species of Cacopsylla pruni (Hemiptera: Psylloidea) Nicolas Sauvion,Jean Peccoud,Christine N. Meynard,David Ouvrard Biodiversity Data Journal, 2021, 9, pp.e68860. ⟨10.3897/BDJ.9.e68860⟩ Article dans une revue (data paper) hal-03230951v2
Transposable Elements and the Evolution of Insects Clément Gilbert,Jean Peccoud,Richard Cordaux Annual Review of Entomology, 2021, 66 (1), pp.355-372. ⟨10.1146/annurev-ento-070720-074650⟩ Article dans une revue hal-03376520v1
Experimental evidence of Wolbachia introgressive acquisition between terrestrial isopod subspecies Nicolas Bech,Sophie Beltran-Bech,Cassandre Chupeau,Jean Peccoud,Magali Thierryet al. Current zoology, 2021, 67 (4), pp.455 - 464. ⟨10.1093/cz/zoaa078⟩ Article dans une revue hal-03322986v1
Multi-scale spatial genetic structure of the vector-borne pathogen 'Candidatus phytoplasma prunorum' in orchards and in wild habitats Véronique Marie-Jeanne,François Bonnot,Gaël Thébaud,Jean Peccoud,Gérard Labonneet al. Scientific Reports, 2020, 10 (1), pp.5002. ⟨10.1038/s41598-020-61908-0⟩ Article dans une revue hal-02548441v1
Horizontal transfer and evolution of transposable elements in vertebrates Hua-Hao Zhang,Jean Peccoud,Min-Rui-Xuan Xu,Xiao-Gu Zhang,Clement Gilbert Nature Communications, 2020, 11, pp.1362. ⟨10.1038/s41467-020-15149-4⟩ Article dans une revue hal-03020048v1
The Genome of Armadillidium vulgare (Crustacea, Isopoda) Provides Insights into Sex Chromosome Evolution in the Context of Cytoplasmic Sex Determination Mohamed Amine Chebbi,Thomas Becking,Bouziane Moumen,Isabelle Giraud,Clément Gilbertet al. Molecular Biology and Evolution, 2019, 36 (4), pp.727-741. ⟨10.1093/molbev/msz010⟩ Article dans une revue hal-02341008v1
Sex chromosomes control vertical transmission of feminizing Wolbachia symbionts in an isopod Thomas Becking,Mohamed Amine Chebbi,Isabelle Giraud,Bouziane Moumen,Tiffany Laverréet al. PLoS Biology, 2019, 17 (10), pp.e3000438. ⟨10.1371/journal.pbio.3000438⟩ Article dans une revue hal-03020063v1
Global survey of mobile DNA horizontal transfer in arthropods reveals Lepidoptera as a prime hotspot Daphné Reiss,Gladys Mialdea,Vincent Miele,Damien M. de Vienne,Jean Peccoudet al. PLoS Genetics, 2019, 15 (2), pp.e1007965. ⟨10.1371/journal.pgen.1007965⟩ Article dans une revue hal-02140494v1
Disentangling the Causes for Faster-X Evolution in Aphids Julie Jaquiéry,Jean Peccoud,Tiphaine Ouisse,Fabrice Legeai,Nathalie Prunier Letermeet al. Genome Biology and Evolution, 2018, 10 (2), pp.507-520. ⟨10.1093/gbe/evy015⟩ Article dans une revue hal-03276874v1
Fast Evolution and Lineage-Specific Gene Family Expansions of Aphid Salivary Effectors Driven by Interactions with Host-Plants Hélène Boulain,Fabrice Legeai,Endrick Guy,Stéphanie Morliere,Nadine Douglaset al. Genome Biology and Evolution, 2018, 10 (6), pp.1554-1572. ⟨10.1093/gbe/evy097⟩ Article dans une revue hal-01891942v1
A Survey of Virus Recombination Uncovers Canonical Features of Artificial Chimeras Generated During Deep Sequencing Library Preparation Jean Peccoud,Sebastian Lequime,Isabelle Moltini-Conclois,Isabelle Giraud,Louis Lambrechtset al. G3, 2018, 8 (4), pp.1129-1138. ⟨10.1534/g3.117.300468⟩ Article dans une revue hal-01778157v1
Analyzing Horizontal Transfer of Transposable Elements on a Large Scale: Challenges and Prospects Jean Peccoud,Richard Cordaux,Clément Gilbert BioEssays, 2018, 40 (2), ⟨10.1002/bies.201700177⟩ Article dans une revue hal-01696095v1
Rapid evolution of aphid pests in agricultural environments Jean-Christophe Simon,Jean Peccoud Current Opinion in Insect Science, 2018, 26, pp.17 - 24. ⟨10.1016/j.cois.2017.12.009⟩ Article dans une revue (article de synthèse) hal-01699353v1
A framework for estimating the effects of sequential reproductive barriers: Implementation using Bayesian models with field data from cryptic species Jean Peccoud,David R.J. Pleydell,Nicolas Sauvion Evolution - International Journal of Organic Evolution, 2018, 72 (11), pp.2503-2512. ⟨10.1111/evo.13595⟩ Article dans une revue hal-01976412v1
Identifying genomic hotspots of differentiation and candidate genes involved in the adaptive divergence of pea aphid host races Pierre Nouhaud,Mathieu Gautier,Anaïs Gouin,Julie Jaquiéry,Jean Peccoudet al. Molecular Ecology, 2018, 27 (16), pp.3287 - 3300. ⟨10.1111/mec.14799⟩ Article dans une revue hal-01892027v1
Comparative analysis of spatial genetic structure in an ant-plant symbiosis reveals a tension zone and highlights speciation processes in tropical Africa Rumsaïs Blatrix,Jean Peccoud,Céline Born,Finn Piatscheck,Laure Benoitet al. Journal of Biogeography, 2017, 44 (8), pp.1856-1868. ⟨10.1111/jbi.12972⟩ Article dans une revue hal-02315946v1
Untangling Heteroplasmy, Structure, and Evolution of an Atypical Mitochondrial Genome by PacBio Sequencing. Jean Peccoud,Mohamed Amine Chebbi,Alexandre Cormier,Bouziane Moumen,Clément Gilbertet al. Genetics, 2017, 207 (1), pp.269-280. ⟨10.1534/genetics.117.203380⟩ Article dans une revue hal-01586985v1
Massive horizontal transfer of transposable elements in insects. Jean Peccoud,Vincent Loiseau,Richard Cordaux,Clément Gilbert Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (18), pp.4721-4726. ⟨10.1073/pnas.1621178114⟩ Article dans une revue hal-01513704v1
Continuous Influx of Genetic Material from Host to Virus Populations. Clément Gilbert,Jean Peccoud,Aurélien Chateigner,Bouziane Moumen,Richard Cordauxet al. PLoS Genetics, 2016, 12 (2), pp.e1005838. ⟨10.1371/journal.pgen.1005838⟩ Article dans une revue hal-01266766v1
Genetic characterisation of new host-specialised biotypes and novel associations with bacterial symbionts in the pea aphid complex Jean Peccoud,Frédérique Maheo,Manon de La Huerta,Cindy Laurence,Jean-Christophe Simon Insect conservation and diversity, 2015, 8 (5), pp.484-492. ⟨10.1111/icad.12131⟩ Article dans une revue istex hal-01252653v1
Genomics of adaptation to host-plants in herbivorous insects Jean-Christophe Simon,Emmanuelle d'Alencon,Endrick Guy,Emmanuelle Jacquin-Joly,Julie Jaquiéryet al. Briefings in Functional Genomics and Proteomics, 2015, 14 (6), pp.413-423. ⟨10.1093/bfgp/elv015⟩ Article dans une revue hal-03419843v1
Inheritance patterns of secondary symbionts during sexual reproduction of pea aphid biotypes Jean Peccoud,Joel Bonhomme,Frédérique Maheo,Manon de La Huerta,Olivier Cossonet al. Insect Science, 2014, 21 (3), pp.291-300. ⟨10.1111/1744-7917.12083⟩ Article dans une revue istex hal-01208708v1
Genetic control of contagious asexuality in the pea aphid Julie Jaquiéry,Jean Peccoud,Tiphaine Ouisse,Fabrice Legeai,Nathalie Prunier-Letermeet al. PLoS Genetics, 2014, 10 (12), pp.e1004838. ⟨10.1371/journal.pgen.1004838⟩ Article dans une revue hal-01701165v1
Widespread host-dependent hybrid unfitness in the pea aphid species complex Jean Peccoud,Manon de La Huerta,Joel Bonhomme,Cindy Laurence,Yannick Outremanet al. Evolution - International Journal of Organic Evolution, 2014, 68 (10), pp.2983-2995. ⟨10.1111/evo.12478⟩ Article dans une revue hal-01208754v1
Genomic regions repeatedly involved in divergence among plant-specialized pea aphid biotypes Pierre Nouhaud,Jean Peccoud,Frédérique Mahéo,Lucie Mieuzet,Julie Jaquiéryet al. Journal of Evolutionary Biology, 2014, 27 (9), pp.2013-2020. ⟨10.1111/jeb.12441⟩ Article dans une revue hal-01178940v1
Molecular tests to assign individuals within the Cacospylla pruni complex Jean Peccoud,Gerard Labonne,Nicolas Sauvion PLoS ONE, 2013, 8 (8), pp.e72454. ⟨10.1371/journal.pone.0072454⟩ Article dans une revue hal-01922692v1
Horizontally Transmitted Symbionts and Host Colonization of Ecological Niches Lee M. Henry,Jean Peccoud,Jean-Christophe Simon,Jarrod D. Hadfield,Martin J. C. Maidenet al. Current Biology, 2013, 23 (17), pp.1713 - 1717. ⟨10.1016/j.cub.2013.07.029⟩ Article dans une revue hal-02652552v1
Permanent genetic resources added to Molecular Ecology Resources database 1 December 2011 - 31 January 2012. M.C. Arias,Emilie Arnoux,James J. Bell,Abel Bernadou,Giorgia Binoet al. Molecular Ecology Resources, 2012, 12 (3), pp.570-572. ⟨10.1111/j.1755-0998.2012.03133.x⟩ Article dans une revue istex hal-00687667v1
Permanent genetic resources added to molecular ecology resources database 1 august 2011-30 september 2011 S.W. A'Hara,Paul Amouroux,Emily Argo,Arman Avand-Faghih,Ashoktaru Baratet al. Molecular Ecology Resources, 2012, 12 (1), pp.185-189. ⟨10.1111/j.1755-0998.2011.03088.x⟩ Article dans une revue hal-02653040v1
Evolutionary history of aphid-plant associations and their role in aphid diversification. J. Peccoud,Jean-Christophe Simon,C. von Dohlen,A. Coeur d'Acier,Manuel Plantegenestet al. Comptes Rendus. Biologies, 2010, 333 (6-7), pp.474-87. ⟨10.1016/j.crvi.2010.03.004⟩ Article dans une revue istex hal-00729508v1
The pea aphid complex as a model of ecological speciation Jean Peccoud,Jean-Christophe Simon Ecological Entomology, 2010, 35 (s1), pp.119-130. ⟨10.1111/j.1365-2311.2009.01147.x⟩ Article dans une revue hal-02662956v1
Post-Pleistocene radiation of the pea aphid complex revealed by rapidly evolving endosymbionts Jean Peccoud,Jean-Christophe Simon,Heather Mclaughlin,Nancy Moran Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (38), pp.16315-16320. ⟨10.1073/pnas.0905129106⟩ Article dans une revue hal-02668379v1
A continuum of genetic divergence from sympatric host races to species in the pea aphid complex Jean Peccoud,Anthony Ollivier,Manuel Plantegenest,Jean-Christophe Simon Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (18), pp.7495-7500. ⟨10.1073/pnas.0811117106⟩ Article dans une revue hal-02667909v1
Host range expansion of an introduced insect pest through multiple colonizations of specialized clones. J. Peccoud,C.C. Figueroa,A.X. Silva,C.C. Ramirez,L. Mieuzetet al. Molecular Ecology, 2008, 17 (21), pp.4608-18. ⟨10.1111/j.1365-294X.2008.03949.x⟩ Article dans une revue hal-00729150v1

Communication dans un congrès (6)

A virus feminizes carriers in a woodlouse Théo Ulvé,Yann Dussert,Baptiste Lhéraud,Alexandra Lafitte,Thomas Beckinget al. EMBO Workshop - Molecular mechanisms of selfish elements and strategies, Luca Soldini; Tanja Schwander; Laura Ross; Axel Imhof, Feb 2026, Berne, Switzerland Communication dans un congrès hal-05509163v1
Coexistence of three sex determinants in a population of the pill bug Armadillidium arcangelii Théo Ulvé,Yann Dussert,Baptiste Lhéraud,Alexandra Lafitte,Romain Pigeaultet al. REID 2025 : Réseau Ecologie des Interactions Durables, Natacha Kremer; Carole Vincent-Monegat; Laurence Mouton; Patricia Luis; Raphaël Jorge; Sylvain Charlat; Anna Zaidman-Rémy; Aurélien Vigneron; Catherine Fiol; Claire Valiente; Fabrice Vavre; Julien Varaldi, May 2025, Lyon, France Communication dans un congrès hal-05508674v1
Identification of new antimicrobial peptides in Armadillidium vulgare using PepTraq. Christine Braquart-Varnier,Yann Dussert,Bouziane Moumen,Louis Pailler,Jean Peccoudet al. REID 2025, May 2025, Lyon, France Communication dans un congrès hal-05518405v1
A virus feminizes carriers in a pill bug Jean Peccoud,Théo Ulvé,Yann Dussert,Baptiste Lhéraud,Alexandra Lafitteet al. REID 2025 : Réseau Ecologie des Interactions Durables, Natacha Kremer; Carole Vincent-Monegat; Julien Varaldi; Laurence Mouton; Raphaël Jorge; Sylvain Charlat; Anna Zaidman-Rémy; Aurélien Vigneron; Catherine Fiol; Claire Valiente Moro; Fabrice Vavre, May 2025, Lyon, France Communication dans un congrès hal-05499774v1
Identification de nouveaux peptides antimicrobiens chez Armadillidium vulgare à l’aide de PepTraq Christine Braquart-Varnier,Yann Dussert,Bouziane Moumen,Louis Pailler,Jean Peccoudet al. Journée Thématique MuFoPAM 2024, Réseau MuFoPAM, Oct 2024, Paris, France Communication dans un congrès hal-05518411v1
Caractérisation d'espèces cryptiques du psylle Cacopsylla pruni, insecte vecteur d'une maladie des Prunus Nicolas Sauvion,Jean Peccoud,David Pleydell,Véronique Marie-Jeanne,Patrick Limonet al. Ecologie 2010, session " Adaptation des bioagresseurs de plantes à leur environnement biotique et abiotique ", Sep 2010, Montpellier, France Communication dans un congrès hal-01927485v1

Pré-publication, Document de travail (5)

Tissue heterogeneity is associated with phenotypic but not genomic diversity in Wolbachia endosymbionts Romain Pigeault,Yann Dussert,Raphaël Jorge,Theo Ulve,Marie Panzaet al. 2025 Pré-publication, Document de travail hal-05399359v1
Temporal stability of sex ratio distorter prevalence in natural populations of the isopod Armadillidium vulgare Sylvine Durand,Isabelle Giraud,Anaïs Loisier,Nicolas Bech,Frédéric Grandjeanet al. 2024 Pré-publication, Document de travail hal-04535542v1
Characterization of a sex-determining region and its genomic context via statistical estimates of haplotype frequencies in daughters and sons sequenced in pools Richard Cordaux,Mohamed Amine Chebbi,Isabelle Giraud,David Pleydell,Jean Peccoud 2020 Pré-publication, Document de travail hal-02915466v1
Multi-scale spatial genetic structure of a vector-borne plant pathogen in orchards and wild habitat Véronique Marie-Jeanne,Francois Bonnot,Gael Thébaud,Jean Peccoud,Gérard Labonneet al. 2019 Pré-publication, Document de travail (preprint/prepublication) hal-02930062v1
A framework for estimating the effects of sequential reproductive barriers: implementation using Bayesian models with field data from cryptic species Jean Peccoud,David R.J. Pleydell,Nicolas Sauvion 2018 Pré-publication, Document de travail (preprint/prepublication) hal-02916017v1

Poster de conférence (1)

Investigating &lt;i&gt;Wolbachia&lt;/i&gt; symbiont-mediated host protection against a bacterial pathogen using a natural &lt;i&gt;Wolbachia&lt;/i&gt; nuclear insert Baptiste Lhéraud,Cybèle Prigot-Maurice,Samuel Gueritault,Sophie Beltran-Bech,Richard Cordauxet al. Réseau Ecologie des Interactions Durables (REID), May 2023, Poitiers, France Poster de conférence hal-05525243v1

Thèse (1)

Spéciation écologique et radiation adaptative dans le complexe du puceron du pois, Acyrthosiphon pisum Jean Peccoud Sciences du Vivant [q-bio]. AGROCAMPUS OUEST, 2009. Français. ⟨NNT : ⟩ Thèse tel-02818988v1