Jérémy Just

Identifiants chercheurs

IdHAL :

jeremy-just

ORCID :

0000-0003-0842-9808

IdRef :

264312236

Publications

Article dans une revue (18)

BOSC 2023, the 24th annual Bioinformatics Open Source Conference [editorial] Nomi Harris,Christopher Fields,Karsten Hokamp,Jérémy Just,Radhika Khetaniet al. F1000Research, 2023, 12, pp.1568. ⟨10.12688/f1000research.143015.1⟩ Article dans une revue hal-04360680v1
Transcriptomics at Maize Embryo/Endosperm Interfaces Identifies a Transcriptionally Distinct Endosperm Subdomain Adjacent to the Embryo Scutellum Nicolas Doll,Jérémy Just,Véronique Brunaud,José Caïus,Aurélie Grimaultet al. The Plant cell, 2020, 32 (4), pp.833-852. ⟨10.1105/tpc.19.00756⟩ Article dans une revue hal-03065555v1
Rosa spp. Jérémy Just,Mohammed Bendahmane Trends in Genetics, 2020, 36 (2), pp.146-147. ⟨10.1016/j.tig.2019.11.002⟩ Article dans une revue hal-03153174v1
The development of a high-density genetic map significantly improves the quality of reference genome assemblies for rose Shubin Li,Guoqian Yang,Shuhua Yang,Jérémy Just,Huijun Yanet al. Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-42428-y⟩ Article dans une revue hal-02541884v1
Single and multiple gene knockouts by CRISPR–Cas9 in maize Nicolas M Doll,Laurine Gilles,Marie-France Gerentes,Christelle Richard,Jérémy Justet al. Plant Cell Reports, 2019, 38 (4), pp.487-501. ⟨10.1007/s00299-019-02378-1⟩ Article dans une revue hal-02349639v1
The Rosa genome provides new insights into the domestication of modern roses Olivier Raymond,Jerome Gouzy,Jérémy Just,Hélène Badouin,Marion Verdenaudet al. Nature Genetics, 2018, 50 (6), pp.772-777. ⟨10.1038/s41588-018-0110-3⟩ Article dans une revue hal-01798003v1
A miR172 target-deficient AP2-like gene correlates with the double flower phenotype in roses Léa François,Marion Verdenaud,Xiaopeng Fu,Darcy Ruleman,Annick Duboiset al. Scientific Reports, 2018, 8, pp.12912. ⟨10.1038/s41598-018-30918-4⟩ Article dans une revue hal-02389731v1
The rosa chinensis cv. viridiflora phyllody phenotype Is associated with misexpression of flower organ identity genes Huijun Yan,Hao Zhang,Qigang Wang,Hongying Jian,Xianqin Qiuet al. Frontiers in Plant Science, 2016, 7, ⟨10.3389/fpls.2016.00996⟩ Article dans une revue hal-02640198v1
Sixteen cytosolic glutamine synthetase genes identified in the Brassica napus L. genome are differentially regulated depending on nitrogen regimes and leaf senescence Mathilde Orsel Baldwin,Michaël Moison,Vanessa Clouet,Justine Thomas,Françoise Leprinceet al. Journal of Experimental Botany, 2014, 65 (14), pp.3927-3947. ⟨10.1093/jxb/eru041⟩ Article dans une revue hal-01204074v1
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea Isobel A. P. Parkin,Chushin Koh,Haibao Tang,Stephen J. Robinson,Sateesh Kagaleet al. Genome Biology, 2014, 15 (6), 18 p. ⟨10.1186/gb-2014-15-6-r77⟩ Article dans une revue hal-02639882v1
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome Boulos Chalhoub,France Denoeud,Shengyi Liu,Isobel A. P. Parkin,Haibao Tanget al. Science, 2014, 345 (6199), pp.950-953. ⟨10.1126/science.1253435⟩ Article dans une revue hal-01208705v1
A Dominant Point Mutation in a RINGv E3 Ubiquitin Ligase Homoeologous Gene Leads to Cleistogamy in Brassica napus Yun-Hai Lu,Dominique Arnaud,Harry Belcram,Cyril Falentin,Patricia Rouaultet al. The Plant cell, 2012, 24 (12), pp.4875 - 4891. ⟨10.1105/tpc.112.104315⟩ Article dans une revue hal-01208649v1
Prevalence of gene expression additivity in genetically stable wheat allohexaploids Houda Chelaifa-Ammari,Veronique Chague,Smahane Chalabi,Imen Mestiri,Dominique Arnaudet al. New Phytologist, 2012, 197 (3), pp.730 - 736. ⟨10.1111/nph.12108⟩ Article dans une revue hal-01208638v1
Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat Zengcui Zhanga,Harry H. Belcram,Piotr Gornickic,Mathieu Charles,Jérémy Justet al. Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (46), pp.18737 - 18742. ⟨10.1073/pnas.1110552108⟩ Article dans une revue hal-02650358v1
Impact of transposable elements on the organization and function of allopolyploid genomes Christian Parisod,Karine Alix,Jérémy Just,Maud Petit,Véronique Sarilaret al. New Phytologist, 2010, 186 (1), pp.37-45. ⟨10.1111/j.1469-8137.2009.03096.x⟩ Article dans une revue hal-01203938v1
Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids Veronique Chague,Jérémy Just,Imen Mestiri,Sandrine Balzergue,Anne-Marie A.-M. Tanguyet al. New Phytologist, 2010, 187 (4), pp.1181-1194. ⟨10.1111/j.1469-8137.2010.03339.x⟩ Article dans une revue hal-02664349v1
Dynamics and Differential Proliferation of Transposable Elements During the Evolution of the B and A Genomes of Wheat Mathieu Charles,Harry H. Belcram,Jérémy Just,Cécile C. Huneau,Agnès Violletet al. Genetics, 2008, 180 (2), pp.1071-1086 Article dans une revue hal-02654898v1
GénoPlante-Info (GPI): a collection of databases and bioinformatics resources for plant genomics Dylan Samson,F. Legeai,Emmanuelle Karsenty,Sébastien Reboux,J.B. Veyrieraset al. Nucleic Acids Research, 2003, 31 (1), pp.179-182. ⟨10.1093/nar/gkg060⟩ Article dans une revue hal-02682546v1

Communication dans un congrès (4)

Evaluation of genome and base editing tools in maize protoplasts Yannick Fierlej,Nathanaël Jacquier,Loïc Guille,Jérémy Just,Emilie Monteset al. 5th European Maize Meeting, Jun 2023, Bologne (Italy), Italy Communication dans un congrès hal-04206449v1
Online tools to support the Petunia research community: A new Petunia genome BLAST server with flanking sequence recovery option Jérémy Just,M. Vandenbussche World Petunia Days 2023, Jul 2023, Perugia, Italy Communication dans un congrès hal-04958643v1
Characteristic of the Endosperm Adjacent to the Embryo Scutellum (EAS) of Maize Nicolas Doll,Yannick Fierlej,Jérémy Just,Veronique Brunaud,José Caiuset al. 4th European Maize Meeting, Sep 2021, Regensburg, Germany Communication dans un congrès hal-03354711v1
Towards the rose genome sequence and its use in research and breeding Fabrice Foucher,Laurence Hibrand-Saint Oyant,Latifa Hamama,Soulaiman Sakr,H. Nybomet al. VI International Symposium on Rose Research and Cultivation, 2015, Hanovre, Germany. pp.167-175 Communication dans un congrès hal-01393815v1

Chapitre d'ouvrage (1)

Outils chimiques, bio-informatiques et bases de données en écologie chimique Nicolas Barthes,Jean Claude Caissard,Jérémy Just,Xavier Fernandez Écologie chimique, , 2017, 978-1-78405-186-0 Chapitre d'ouvrage hal-03228447v1

Article de blog scientifique (1)

BOSC CollaborationFest 2023 Report Jérémy Just 2023 Article de blog scientifique hal-04983610v1

Pré-publication, Document de travail (1)

The molecular signatures of compatible and incompatible pollination Chie Kodera,Jérémy Just,Martine da Rocha,Antoine Larrieu,Lucie Rigletet al. 2020 Pré-publication, Document de travail hal-02992075v1