Jérôme Hamelin

Publications

Article dans une revue (78)

Restoration of deuterium marker for multi-isotope mapping of cellular metabolic activity Nadiia Yamborko,Laura Schwab,Lubos Polerecky,Yalda Davoudpour,Hugo Berthelotet al. Scientific Reports, 2026, 16 (1), pp.883. ⟨10.1038/s41598-025-33762-5⟩ Article dans une revue hal-05494457v1
Metagenome-assembled genomes from oxygenic photogranules obtained from photobioreactors treating synthetic wastewater Oriane Della-Negra,Rémi Servien,Kim Milferstedt,Jérôme Hamelin,Christophe Kloppet al. Microbiology Resource Announcements, In press, ⟨10.1128/mra.01310-25⟩ Article dans une revue hal-05494466v1
Transient cyanobacteria drive hydrostatic photogranulation but disappear during microbial succession Sandra Galea-Outón,Jérôme Hamelin,Kim Milferstedt Biofilm, 2026, 11, pp.100339. ⟨10.1016/j.bioflm.2025.100339⟩ Article dans une revue hal-05494100v1
A meta-analysis of pathogen reduction data in anaerobic digestion Laura Álvarez-Fraga,Gabriel Capson-Tojo,Malo Sanglier,Jérôme Hamelin,Renaud Escudiéet al. Renewable and Sustainable Energy Reviews, 2025, 207, pp.114982. ⟨10.1016/j.rser.2024.114982⟩ Article dans une revue (article de synthèse) hal-04839458v1
History of carbon supply shapes the metabolic response of photogranules to light shifts Oriane Della-Negra,Anaïs Séguéla,Camille Guilmineau,Roselyne Gautier,Cécile Canletet al. Water Research, 2025, 281, pp.123557. ⟨10.1016/j.watres.2025.123557⟩ Article dans une revue hal-05014975v1
Phototrophic aggregates for wastewater treatment: identifying key parameters for formation and characterization Clément Billery,Gilberte Gaval,Jérôme Hamelin,Kim Milferstedt Reviews in Environmental Science and Bio/technology, 2025, 24, pp.425-450. ⟨10.1007/s11157-025-09728-4⟩ Article dans une revue hal-05133228v1
Integrated Co-extraction Protocol for Transcriptomic and 1H NMR Metabolomic Analysis of Multi-species Biofilms Anaïs Séguéla,Oriane Della-Negra,Roselyne Gautier,Jérôme Hamelin,Kim Milferstedtet al. Bio-protocol , 2025, 15 (5), pp.5237. ⟨10.21769/BioProtoc.5237⟩ Article dans une revue hal-05007084v1
Biofilm growth dynamics in a micro-irrigation with reclaimed wastewater in the field scale Vincent Moulia,Marc Heran,Geoffroy Lesage,Jérôme Hamelin,Jérôme Pintaet al. Journal of Environmental Management, 2024, 370, pp.122976. ⟨10.1016/j.jenvman.2024.122976⟩ Article dans une revue hal-04748831v1
Bioaccessibility Characterization of Organic Matter, Nitrogen, and Phosphorus from Microalgae-Bacteria Aggregates Enrique Romero-Frasca,Sandra Galea-Outón,Karina Coronado-Apodaca,Kim Milferstedt,Julie Jimenezet al. Waste and Biomass Valorization, 2024, 15, pp.5137-5150. ⟨10.1007/s12649-024-02495-3⟩ Article dans une revue hal-04569684v1
High methane potential of oxygenic photogranules decreases after starvation Sandra Galea-Outón,Kim Milferstedt,Jérôme Hamelin Bioresource Technology, 2024, 406, pp.110986. ⟨10.1016/j.biortech.2024.130986⟩ Article dans une revue hal-04677885v1
Short-term effect of reclaimed wastewater quality gradient on soil microbiome during irrigation Vincent Moulia,Nassim Ait-Mouheb,Geoffroy Lesage,Jérôme Hamelin,Nathalie Weryet al. Science of the Total Environment, 2023, 901, pp.166028. ⟨10.1016/j.scitotenv.2023.166028⟩ Article dans une revue hal-04178170v1
Initial type and abundance of cyanobacteria determine morphotype development of phototrophic ecosystems Esmee Joosten,Jérôme Hamelin,Kim Milferstedt FEMS Microbiology Ecology, 2023, 99 (9), pp.fiad099. ⟨10.1093/femsec/fiad099⟩ Article dans une revue hal-04182443v1
Polyhydroxybutyrate Production from Methane and Carbon Dioxide by a Syntrophic Consortium of Methanotrophs with Oxygenic Photogranules without an External Oxygen Supply Selim Ashoor,Seong-Hoon Jun,Han Do Ko,Jinwon Lee,Jérôme Hamelinet al. Microorganisms, 2023, 11 (5), pp.1110. ⟨10.3390/microorganisms11051110⟩ Article dans une revue hal-04146720v1
Use of additives to improve collective biogas plant performances: A comprehensive review Estelle Leca,Bastien Zennaro,Jérôme Hamelin,Hélène Carrère,Cecilia Sambusiti Biotechnology Advances, 2023, 65, pp.108129. ⟨10.1016/j.biotechadv.2023.108129⟩ Article dans une revue (article de synthèse) hal-04117886v1
Screening and Application of Ligninolytic Microbial Consortia to Enhance Aerobic Degradation of Solid Digestate Ulysse Brémond,Aude Bertrandias,Jérôme Hamelin,Kim Milferstedt,Valérie Bru-Adanet al. Microorganisms, 2022, 10 (2), pp.277. ⟨10.3390/microorganisms10020277⟩ Article dans une revue hal-03554334v1
Engineered methanotrophic syntrophy in photogranule communities removes dissolved methane Anissa Sukma Safitri,Jérôme Hamelin,Roald Kommedal,Kim Milferstedt Water Research X, 2021, 12, pp.100106. ⟨10.1016/j.wroa.2021.100106⟩ Article dans une revue hal-03262321v1
Wastewater treatment using oxygenic photogranule-based process has lower environmental impact than conventional activated sludge process Doris Brockmann,Yves Gérand,Chul Park,Kim Milferstedt,Arnaud Héliaset al. Bioresource Technology, 2021, 319, pp.124204. ⟨10.1016/j.biortech.2020.124204⟩ Article dans une revue hal-02962170v1
Mapping the biological activities of filamentous oxygenic photogranules Hicham Ouazaite,Kim Milferstedt,Jérôme Hamelin,Elie Desmond-Le Quéméner Biotechnology and Bioengineering, 2021, 118 (2), pp.601-611. ⟨10.1002/bit.27585⟩ Article dans une revue hal-02981499v1
Simple Time-lapse Imaging for Quantifying the Hydrostatic Production of Oxygenic Photogranules Esmee Joosten,Jérôme Hamelin,Kim Milferstedt Bio-protocol , 2020, 10 (19), ⟨10.21769/BioProtoc.3784⟩ Article dans une revue hal-02957755v1
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike‐in standard Olivier Zemb,Caroline Achard,Jérôme Hamelin,Marie‐léa de Almeida,Beatrice Gabinaudet al. MicrobiologyOpen, 2020, 9 (3), Non paginé. ⟨10.1002/mbo3.977⟩ Article dans une revue hal-02625681v1
Growth Progression of Oxygenic Photogranules and Its Impact on Bioactivity for Aeration-Free Wastewater Treatment Ahmed S. Abouhend,Kim Milferstedt,Jérôme Hamelin,Abeera A. Ansari,Caitlyn Butleret al. Environmental Science and Technology, 2020, 54, pp.486-496. ⟨10.1021/acs.est.9b04745⟩ Article dans une revue hal-02629305v1
World Scientists’ Warning of a Climate Emergency William Ripple,Christopher Wolf,Thomas Newsome,Phoebe Barnard,William Moomawet al. Bioscience, 2020, 70 (1), pp.8-12. ⟨10.1093/biosci/biz088⟩ Article dans une revue hal-02444102v1
Novel Outlook in Microbial Ecology: Nonmutualistic Interspecies Electron Transfer Roman Moscoviz,Elie Desmond-Le Quéméner,Eric Trably,Nicolas Bernet,Jérôme Hamelin Trends in Microbiology, 2020, 28 (4), pp.245-253. ⟨10.1016/j.tim.2020.01.008⟩ Article dans une revue (article de synthèse) hal-02534986v1
CO2 addition to increase biomass production and control microalgae species in high rate algal ponds treating wastewater Enrica Uggetti,Bruno Sialve,Jérôme Hamelin,Anaïs Bonnafous,Jean-Philippe Steyer Journal of CO2 Utilization, 2018, 28, pp.292-298. ⟨10.1016/j.jcou.2018.10.009⟩ Article dans une revue hal-02623794v1
The oxygenic photogranule process for aeration-free wastewater treatment Ahmed S. Abouhend,Adam Mcnair,Wenye C. Kuo-Dahab,Christopher Watt,Caitlyn S. Butleret al. Environmental Science and Technology, 2018, 52 (6), pp.3503-3511. ⟨10.1021/acs.est.8b00403⟩ Article dans une revue hal-02626952v1
Multiplexed chemostat system for quantification of biodiversity and ecosystem functioning in anaerobic digestion. Diane Plouchart,Kim Milferstedt,Guillaume Guizard,Eric Latrille,Jérôme Hamelin PLoS ONE, 2018, 13 (3), pp.e0193748. ⟨10.1371/journal.pone.0193748⟩ Article dans une revue hal-02623358v1
The use of green macroalgae (&lt;em&gt;Ulva lactuca&lt;/em&gt; and &lt;em&gt;Codium tomentosum&lt;/em&gt;) that have a high methane potential, as a source of biogas in Senegal Halima Maiguizo-Diagne,Ndeye Aida Ndiaye,Yacine Ndour-Badiane,Dominique Masse,Michel Torrijoset al. Journal of Applied Biosciences, 2018, 132, pp.13404-13412. ⟨10.4314/jab.v132i1.2⟩ Article dans une revue hal-02618354v1
The importance of filamentous cyanobacteria in the development of oxygenic photogranules Kim Milferstedt,W. Camilla Kuo-Dahab,C. S. Butler,Jérôme Hamelin,A. S. Abouhendet al. Scientific Reports, 2017, 7, pp.15. ⟨10.1038/s41598-017-16614-9⟩ Article dans une revue hal-02626438v1
Correlating methane production to microbiota in anaerobic digesters fed synthetic wastewater Kaushik Venkiteshwaran,Kim Milferstedt,Jérôme Hamelin,M. Fujimoto,M. Johnsonet al. Water Research, 2017, 110, pp.161-169. ⟨10.1016/j.watres.2016.12.010⟩ Article dans une revue hal-01608544v1
World Scientists’ Warning to Humanity: A Second Notice William J. Ripple,Christopher Wolf,Thomas M. Newsome,Mauro Galetti,Mohammed Alamgiret al. Bioscience, 2017, 67 (12), pp.1026 - 1028. ⟨10.1093/biosci/bix125⟩ Article dans une revue hal-01906049v1
Biogranules applied in environmental engineering Kim Milferstedt,Jérôme Hamelin,Chul Park,Jinyoung Jung,Yuhoon Hwanget al. International Journal of Hydrogen Energy, 2017, 42 (45), pp.27801-27811. ⟨10.1016/j.ijhydene.2017.07.176⟩ Article dans une revue (article de synthèse) hal-02626533v1
A single community dominates structure and function of a mixture of multiple methanogenic communities Pawel Sierocinski,Kim Milferstedt,Florian Bayer,Tobias Grosskopf,Mark Alstonet al. Current Biology, 2017, 27 (21), pp.3390-3395.e4. ⟨10.1016/j.cub.2017.09.056⟩ Article dans une revue hal-02624588v1
Vertebrate bacterial gut diversity: size also matters Jean-Jacques Godon,Pugazhendi Arulazhagan,Jean-Philippe Steyer,Jérôme Hamelin BMC Ecology, 2016, 16 (1), pp.12. ⟨10.1186/s12898-016-0071-2⟩ Article dans une revue hal-02639327v1
Anaerobic digester bioaugmentation influences quasi steady state performance and microbial community Kaushik Venkiteshwaran,Kim Milferstedt,Jérôme Hamelin,D. H. Zitomer Water Research, 2016, 104, pp.128-136. ⟨10.1016/j.watres.2016.08.012⟩ Article dans une revue hal-01608636v1
Challenges in microbial ecology: building predictive understanding of community function and dynamics. Stefanie Widder,Rosalind J Allen,Thomas Pfeiffer,Thomas P Curtis,Carsten Wiufet al. The International Society of Microbiologial Ecology Journal, 2016, 10, pp.1-12. ⟨10.1038/ismej.2016.45⟩ Article dans une revue (article de synthèse) hal-01512087v1
How to use molecular biology tools for the study of the anaerobic digestion process? Angela Cabezas,Juliana Calabria de Araujo,Cecilia Callejas,Amandine Gales,Jérôme Hamelinet al. Reviews in Environmental Science and Bio/technology, 2015, 14 (4), pp.1-65. ⟨10.1007/s11157-015-9380-8⟩ Article dans une revue (article de synthèse) hal-02635684v1
Bioaerosol emissions from open microalgal processes and their potential environmental impacts: what can be learned from natural and anthropogenic aquatic environments? Bruno Sialve,Amandine Gales,Jérôme Hamelin,Nathalie Wéry,Jean-Philippe Steyer Current Opinion in Biotechnology, 2015, 33, pp.279-286. ⟨10.1016/j.copbio.2015.03.011⟩ Article dans une revue (article de synthèse) hal-02633224v1
Adaptation of acidogenic sludge to increasing glycerol concentrations for biohydrogen production Estela Tapia-Venegas,L. Cabrol,B. Brandhoff,Jérôme Hamelin,Eric Trablyet al. Applied Microbiology and Biotechnology, 2015, 99 (19), pp.8295 - 8308. ⟨10.1007/s00253-015-6832-6⟩ Article dans une revue hal-02637362v1
Similar PAH fate in anaerobic digesters inoculated with three microbial communities accumulating either volatile fatty acids or methane Florence Braun,Jérôme Hamelin,Anaïs Bonnafous,Nadine Cathala-Delgenès,Jean-Philippe Steyeret al. PLoS ONE, 2015, 10 (4), ⟨10.1371/journal.pone.0125552⟩ Article dans une revue hal-01159242v1
Nutritional stress induces exchange of cell material and energetic coupling between bacterial species Saida Benomar,David Ranava,María Luz Cárdenas,Eric Trably,Yan Rafrafiet al. Nature Communications, 2015, 6 (6283), 10 p. ⟨10.1038/ncomms7283⟩ Article dans une revue hal-01159245v1
Biofilm development during the start-up period of anaerobic biofilm reactors: the biofilm Archaea community is highly dependent on the support material Frédéric Habouzit,Jérôme Hamelin,Jean-Philippe Steyer,Nicolas Bernet Microbial Biotechnology, 2014, 7 (3), pp.257 - 264. ⟨10.1111/1751-7915.12115⟩ Article dans une revue hal-02637731v1
Only Simpson diversity can be estimated accurately from microbial community fingerprints. Bart Haegeman,Biswarup Sen,Jean-Jacques Godon,Jérôme Hamelin Microbial ecology, 2014, 68 (2), pp.169-72. ⟨10.1007/s00248-014-0394-5⟩ Article dans une revue hal-01190153v1
Substrate milling pretreatment as a key parameter for Solid-State Anaerobic Digestion optimization Jean-Charles Motte,Renaud Escudié,Jérôme Hamelin,Jean-Philippe Steyer,Nicolas Bernetet al. Bioresource Technology, 2014, 173, pp.185-92. ⟨10.1016/j.biortech.2014.09.015⟩ Article dans une revue hal-01190161v1
Total solid content drives hydrogen production through microbial selection during thermophilic fermentation Jean-Charles Motte,Eric Trably,Jérôme Hamelin,Renaud R. Escudie,Anaïs Bonnafouset al. Bioresource Technology, 2014, 166, pp.610-615. ⟨10.1016/j.biortech.2014.05.078⟩ Article dans une revue hal-02640079v1
Spatial distribution of microbial communities in the shallow submarine alkaline hydrothermal field of the Prony Bay, New Caledonia Marianne Quéméneur,Méline Bes,Anne Postec,Nan Mei,Jérôme Hamelinet al. Environmental Microbiology Reports, 2014, 6 (2014), pp.665-674. ⟨10.1111/1758-2229.12184⟩ Article dans une revue istex hal-01190159v1
New urban wastewater treatment with autotrophic membrane bioreactor at low chemical oxygen demand/N substrate ratio Y. Yang,Geoffroy Lesage,Maialen Barret,Nicolas Bernet,Alain Grasmicket al. Water Science and Technology, 2014, 69 (5), pp.960-965. ⟨10.2166/wst.2013.814⟩ Article dans une revue hal-02640314v1
Effect of several saponin containing plant extracts on rumen fermentation in vitro, Tetrahymena pyriformis and sheep erythrocytes Alexandre Budan,Nicolas Tessier,Monique Saunier,Louisa Gillman,Jérôme J. Hamelinet al. Journal of Food, Agriculture and Environment, 2013, 11 (2), pp.576-582 Article dans une revue hal-02651015v1
Two-Stage Alkaline-Enzymatic Pretreatments To Enhance Biohydrogen Production from Sunflower Stalks Florian Monlau,Eric Trably,Abdellatif Barakat,Jérôme Hamelin,Jean-Philippe Steyeret al. Environmental Science and Technology, 2013, 47 (21), pp.12591 - 12599. ⟨10.1021/es402863v⟩ Article dans une revue hal-02647473v1
Total solids content: a key parameter of metabolic pathways in dry anaerobic digestion. Jean-Charles Motte,Eric Trably,Renaud R. Escudie,Jérôme J. Hamelin,Jean-Philippe Steyeret al. Biotechnology for Biofuels, 2013, 6 (1), 164 - 9 p. ⟨10.1186/1754-6834-6-164⟩ Article dans une revue hal-02650996v1
Distribution and hydrophobic properties of Extracellular Polymeric Substances in biofilms in relation towards cohesion M. Ras,Dominique Lefebvre,Nicolas Derlon,Jérôme J. Hamelin,Nicolas Bernetet al. Journal of Biotechnology, 2013, 165 (2), pp.85 - 92. ⟨10.1016/j.jbiotec.2013.03.001⟩ Article dans une revue istex hal-02649958v1
Robust estimation of microbial diversity in theory and in practice Bart Haegeman,Jérôme Hamelin,John Moriarty,Peter Neal,Jonathan Dushoffet al. The International Society of Microbiologial Ecology Journal, 2013, 7, pp.1092-1101. ⟨10.1038/ismej.2013.10⟩ Article dans une revue hal-00859547v1
Sub-dominant bacteria as keystone species in microbial communities producing bio-hydrogen Yan Rafrafi,Eric Trably,Jérôme J. Hamelin,Eric Latrille,Isabelle Meynial-Salleset al. International Journal of Hydrogen Energy, 2013, 38 (12), pp.4975 - 4985. ⟨10.1016/j.ijhydene.2013.02.008⟩ Article dans une revue hal-02649108v1
Specific inhibition of biohydrogen-producing Clostridium sp after dilute-acid pretreatment of sunflower stalks Florian Monlau,Quentin Aemig,Eric Trably,Jérôme J. Hamelin,Jean-Philippe Steyeret al. International Journal of Hydrogen Energy, 2013, 38 (28), pp.12273 - 12282. ⟨10.1016/j.ijhydene.2013.07.018⟩ Article dans une revue hal-02650967v1
Microbial community signature of high-solid content methanogenic ecosystems. Amel Abbassi-Guendouz,Eric Trably,Jérôme J. Hamelin,Claire Dumas,Jean-Philippe Steyeret al. Bioresource Technology, 2013, 133, pp.256-262. ⟨10.1016/j.biortech.2013.01.121⟩ Article dans une revue hal-02651563v1
Ingénierie écologique microbienne pour la production de biohydrogène Eric Trably,M.T. Giudici-Orticoni,S. Benomar,Eric Latrille,Isabelle Meynial-Salleset al. Innovations Agronomiques, 2013, 26, pp.67-82. ⟨10.17180/b0b3-dy98⟩ Article dans une revue hal-02641895v1
In situ proteo-metabolomics reveals metabolite secretion by the acid mine drainage bio-indicator, Euglena mutabilis David Halter,Florence Goulhen-Chollet,Sebastien Gallien,Corinne Casiot,Jérôme J. Hamelinet al. The International Society of Microbiologial Ecology Journal, 2012, 6 (7), pp.1391 - 1402. ⟨10.1038/ismej.2011.198⟩ Article dans une revue hal-02645603v1
Carbon conversion efficiency and population dynamics of a marine algae-bacteria consortium growing on simplified synthetic digestate: First step in a bioprocess coupling algal production and anaerobic digestion Christophe Vasseur,Gaël Bougaran,Matthieu Garnier,Jérôme J. Hamelin,Christophe Leboulangeret al. Bioresource Technology, 2012, 119, pp.79 - 87. ⟨10.1016/j.biortech.2012.05.128⟩ Article dans une revue hal-02652108v1
Projet CreativERU : Concept de rupture appliqué au traitement intensif et à la valorisation des eaux résiduaires urbaines. Dossier Ressources en eau, préservation et gestion Alain Grasmick,Jérôme Hamelin Dossiers - Agropolis, 2012, 14, pp.33-33 Article dans une revue hal-02642009v1
Inhibition of fermentative hydrogen production by lignocellulose-derived compounds in mixed cultures Marianne Quéméneur,Jérôme Hamelin,Abdellatif Barakat,Jean-Philippe Steyer,Hélène Carrèreet al. International Journal of Hydrogen Energy, 2012, 37 (4), pp.3150 - 3159. ⟨10.1016/j.ijhydene.2011.11.033⟩ Article dans une revue istex hal-01809614v1
Improvement of RNA-SIP by pyrosequencing to identify putative 4-n-nonylphenol degraders in activated sludge Olivier Zemb,M. Lee,M.L. Gutierrez-Zamora,Jérôme Hamelin,K. Couplandet al. Water Research, 2012, 46 (3), pp.601-610 Article dans une revue hal-02649918v1
Homogeneity and Synchronous Dynamics of Microbial Communities in Particulate Biofilms: from Major Populations to Minor Groups Gaelle Gévaudan,Jérôme Hamelin,P. Dabert,J.J. Godon,N. Bernet Microbes and environments / JSME, 2012, 27 (2), pp.142-148 Article dans une revue hal-02597169v1
Spatial variability of the functional stability of microbial respiration process: a microcosm study using tropical forest soil Nathalie Fromin,Benjamin Porte,Robert Lensi,Jérôme Hamelin,Anne-Marie Domenachet al. Journal of Soils and Sediments, 2012, 12 (7), pp.1030 - 1039. ⟨10.1007/s11368-012-0528-7⟩ Article dans une revue istex hal-01204209v1
Homogeneity and synchronous dynamics of microbial communities in particulate biofilms: from major populations to minor groups Gaelle Gévaudan,Jérôme J. Hamelin,Patrick Dabert,Jean-Jacques Godon,Nicolas Bernet Microbes and environments / JSME, 2012, 27 (2), pp.142-148. ⟨10.1264/jsme2.ME11264⟩ Article dans une revue hal-02645638v1
Influence of support material properties on the potential selection of Archaea during initial adhesion of a methanogenic consortium Frédéric Habouzit,Gaelle Gévaudan,Jérôme J. Hamelin,Jean-Philippe Steyer,Nicolas Bernet Bioresource Technology, 2011, 102 (5), pp.4054-4060. ⟨10.1016/j.biortech.2010.12.023⟩ Article dans une revue istex hal-02647926v1
Functional versus phylogenetic fingerprint analyses for monitoring hydrogen-producing bacterial populations in dark fermentation cultures Marianne Quéméneur,Jérôme Hamelin,Eric Latrille,Jean-Philippe Steyer,Eric Trably International Journal of Hydrogen Energy, 2011, 36 (6), pp.3870 - 3879. ⟨10.1016/j.ijhydene.2010.12.100⟩ Article dans une revue istex hal-01809618v1
Changes in hydrogenase genetic diversity and proteomic patterns in mixed culture dark fermentation of mono-, di- and tri-saccharides Marianne Quéméneur,Jérôme Hamelin,Saida Benomar,Marie-Thérèse Guidici-Orticoni,Eric Latrilleet al. International Journal of Hydrogen Energy, 2011, 36 (18), pp.11654-11665. ⟨10.1016/j.ijhydene.2011.06.010⟩ Article dans une revue istex hal-00677381v1
Development and application of an enzymatic and cell flotation treatment for the recovery of viable microbial cells from environmental matrices such as anaerobic sludge Florence Braun,Jérôme J. Hamelin,Gaelle Gévaudan,Dominique Patureau Applied and Environmental Microbiology, 2011, 77 (24), pp.8487 - 8493. ⟨10.1128/AEM.05549-11⟩ Article dans une revue hal-02652112v1
Development and application of a functional CE-SSCP fingerprinting method based on [Fe–Fe]-hydrogenase genes for monitoring hydrogen-producing Clostridium in mixed cultures Marianne Quéméneur,Jérôme Hamelin,Eric Latrille,Jean-Philippe Steyer,Eric Trably International Journal of Hydrogen Energy, 2010, 35 (24), pp.13158 - 13167. ⟨10.1016/j.ijhydene.2010.07.076⟩ Article dans une revue istex hal-01809619v1
Selective microbial aerosolization in biogas demonstrated by quantitative PCR Marina Moletta-Denat,Valérie Bru-Adan,Jean Philippe J. P. Delgenes,Jérôme J. Hamelin,Nathalie Wéryet al. Bioresource Technology, 2010, 101 (19), pp.7252-7257. ⟨10.1016/j.biortech.2010.04.035⟩ Article dans une revue istex hal-02662277v1
Distribution of Pseudomonas populations harboring phlD or hcnAB biocontrol genes is related to depth in vineyard soils Miroslav Svercel,Jérôme Hamelin,Brion Duffy,Yvan Moënne-Loccoz,Geneviève Défago Soil Biology and Biochemistry, 2010, 42 (3), pp.466-472. ⟨10.1016/j.soilbio.2009.11.030⟩ Article dans une revue istex halsde-00525757v1
Spatial and temporal variations of the bacterial community in the bovine digestive tract R. J. Michelland,Valérie Monteils,Asma Zened,Sylvie Combes,Laurent Cauquilet al. Journal of Applied Microbiology, 2009, 107, pp.1642-1650. ⟨10.1111/j.1365-2672.2009.04346.x⟩ Article dans une revue hal-02655667v1
DNA reassociation kinetics and diversity indices : richness is not rich enough Bart Haegeman,Dimitri Vanpeteghem,Jean-Jacques Godon,Jérôme J. Hamelin Oikos, 2008, 117 (2), pp.177-181. ⟨10.1111/j.2007.0030-1299.16311.x⟩ Article dans une revue istex hal-02660651v1
Structural divergence of bacterial communities from functionally similar laboratory-scale vermicomposts assessed by PCR-CE-SSCP Biswarup Sen,Jérôme J. Hamelin,Valérie Bru-Adan,Jean-Jacques Godon,T.S. Chandra Journal of Applied Microbiology, 2008, 105 (6), pp.2123-2132. ⟨10.1111/j.1365-2672.2008.03911.x⟩ Article dans une revue hal-02668103v1
How elevated pCO2 modifies total and metabolically active bacterial communities in the rhizosphere of two perennial grasses grown under field conditions Marylin Jossi,Nathalie Fromin,Sonia Tarnawski,Florian Kohler,François Gilletet al. FEMS Microbiology Ecology, 2006, 55 (3), pp.339-350. ⟨10.1111/j.1574-6941.2005.00040.x⟩ Article dans une revue hal-00442595v1
Soil microbial community changes in wooded mountain pastures due to simulated effects of cattle grazing Florent Kohler,Jérôme J. Hamelin,F. Gillet,J.M. Gobat,A. Buttler Plant and Soil, 2005, 278 (1-2), pp.327-340. ⟨10.1007/s11104-005-8809-1⟩ Article dans une revue hal-02681447v1
Examination of Gould's modified S1 (mS1) selective medium and Angle's non-selective medium for describing the diversity of Pseudomonas spp. in soil and root environments Sonia Tarnawski,Jérôme Hamelin,Laurent Locatelli,Michel Aragno,Nathalie Fromin FEMS Microbiology Ecology, 2003, 45 (2), pp.97-104. ⟨10.1016/S0168-6496(03)00130-2⟩ Article dans une revue hal-02126966v1
nifH gene diversity in the bacterial community associated with the rhizosphere of Molinia coerulea, an oligonitrophilic perennial grass Jérôme Hamelin,Nathalie Fromin,Sonia Tarnawski,Sylvie Teyssier-Cuvelle,Michel Aragno Environmental Microbiology, 2002, 4 (8), pp.477-481. ⟨10.1046/j.1462-2920.2002.00319.x⟩ Article dans une revue hal-02126961v1
Specific PCR Amplification for the Genus Pseudomonas Targeting the 3′ Half of 16S rDNA and the Whole 16S–23S rDNA Spacer Laurent Locatelli,Sonia Tarnawski,Jérôme Hamelin,Pierre Rossi,Michel Aragnoet al. Systematic and Applied Microbiology, 2002, 25 (2), pp.220-227. ⟨10.1078/0723-2020-00110⟩ Article dans une revue hal-02126959v1

Communication dans un congrès (83)

Metabolic Responses of Oxygenic Photogranules to Carbon and Light Fluctuations: Insights from Longitudinal Metabolomics Oriane Della-Negra,Anaïs Séguéla,Camille Guilmineau,Roselyne Gautier,Cécile Canletet al. 1. International Conference on Photogranules, Sep 2025, Delft, Netherlands Communication dans un congrès hal-05313754v1
Oxygenic photogranules change metabolism when exposed to shifts in carbon and light availabilities Oriane Della-Negra,Anaïs Séguéla,Camille Guilmineau,Roselyne Gautier,Cécile Canletet al. 11. Microbial Ecology and Water Engineering Conference, Jun 2025, Atlanta, United States Communication dans un congrès hal-05179195v1
Utilisation de l’hétérogénéité multi-échelle des agrégats bactériens pour piloter les procédés à photogranules Kim Milferstedt,Jérôme Hamelin MICROBES 2024 Bienvenue chez les Microbes, Société Française de Microbiologie, Oct 2024, Lille, France Communication dans un congrès hal-04823788v1
Chromatic adaptation of cyanobacterial strains isolated from photogranules exposed to light of different colors Jérôme Hamelin,Antonin Reignaud,Kim Milferstedt 1. International Conference on Novel PhotoRefineries for Resource Recovery (PHOTOREFINERIES 2024), Université de Valladolid, Espagne, Sep 2024, Valladolid, Spain Communication dans un congrès hal-04795195v1
Multi-scale structuring of biologically active aggregates used in biotechnology: photogranules Kim Milferstedt,Jérôme Hamelin 13. Colloque Sciences et Technologies des Poudres (STP 2024), Société Française de Génie des Procédés, Jun 2024, Montpellier, France Communication dans un congrès hal-04823867v1
High Biological Methane Potential of photosynthetic granules when grown in SBR Sandra Galea-Outón,Kim Milferstedt,Jérôme Hamelin 7. International Symposium on Environmental Biotechnology and Engineering (7ISEBE), May 2023, Marseille, France Communication dans un congrès hal-04152033v1
Accessibility and complexity of nutrients present in residual microalgal-bacterial biomass for soil conditioning Enrique Romero-Frasca,Sandra Galea-Outón,Germán Buitrón,Julie Jimenez,Jérôme Hamelinet al. 4. International Conference for Bioresource Technology for Bioenergy, Bioproducts & Environmental Sustainability, May 2023, Lake Garda, Italy Communication dans un congrès hal-04152108v1
Modification of microbial community structures in soil receiving wastewater of increasing qualities during irrigation period Vincent Moulia,Nassim Ait Mouheb,Geoffroy Lesage,Jérôme Hamelin,Nathalie Weryet al. 7. International Symposium on Environmental Biotechnology and Engineering (7ISEBE), May 2023, Marseille, France Communication dans un congrès hal-04151931v1
Soil Microbial Community and Pathogens Variation during Lettuces Drip Irrigation by Raw And Reclaimed Wastewaters Vincent Moulia,Nassim Ait-Mouheb,Geoffroy Lesage,Jérôme Hamelin,Nathalie Weryet al. 13. IWA International Conference On Water Reclamation and Reuse, IWA, Jan 2023, Chennai, India Communication dans un congrès hal-03950223v1
A quantitative meta-analysis of hygienization during anaerobic digestion Laura Alvarez-Fraga,Felipe Guilayn,Malo Sanglier,Gabriel Capson-Tojo,Diana Garcia-Bernetet al. 10. IWA Microbial Ecology and Water Engineering Specialist Conference, Sep 2023, Brisbane, Australia. ⟨10.17180/zssg-c544⟩ Communication dans un congrès hal-04152131v1
Impact of treated wastewater on soil bacterial communities Marc Heran,Geoffroy Lesage,Vincent Moulia,Nassim Ait-Mouheb,Nathalie Wéryet al. Francofilt 2023 : Separative Techniques Facing the Challenges of Sustainable Development, Faculté des sciences et Techniques de Fès, May 2023, Fès, Morocco Communication dans un congrès hal-04822753v1
Chromatic adaptation of cyanobacteria exposed to different light spectra: an engineering tool to direct pigment production Jérôme Hamelin,Antonin Reignaud,Kim Milferstedt 42. Frontier Scientists Workshop: Environmental Bio-Technology Workshop for Reducing GHGs Emissions, Korean Academy of Science and Technology, Nov 2022, Narbonne, France Communication dans un congrès hal-04152281v1
Ecologically engineering methanotrophic photogranules Anissa Sukma Safitri,Jérôme Hamelin,Roald Kommedal,Kim Milferstedt 13. IWA Wastewater Ponds and Algal Technologies Conference, IWA, Jul 2022, Melbourne, Australia Communication dans un congrès hal-04151639v1
Properties of cyanobacterial strains determine the spatial development of a complex phototrophic microbial community Kim Milferstedt,Esmee Joosten,Jérôme Hamelin 42. Frontier Scientists Workshop: Environmental Bio-Technology Workshop for Reducing GHGs Emissions, Korean Academy of Science and Technology, Nov 2022, Narbonne, France Communication dans un congrès hal-04152290v1
Engineering light-driven microbial syntrophies for the generation of value-added products from waste Kim Milferstedt,Jérôme Hamelin Theo Murphy scientific meeting “Microbial ecology for engineering biology”, the Royal Society UK, Mar 2022, Steventon, United Kingdom Communication dans un congrès hal-04152190v1
Microscale activities of individual photogranules as a function of light and carbon availabilities Jérôme Hamelin,Hicham Ouazaite,Elie Desmond-Le Quéméner,Kim Milferstedt 28th Frontier Scientists Workshop “Korea-France Environmental Biotechnology Workshop: Linking Theory and Practice”, The Korean Academy of Science and Technology, Nov 2020, Online, South Korea Communication dans un congrès hal-03033341v1
Triangular syntrophic interactions in methanotrophic photogranules Kim Milferstedt,Jérôme Hamelin 28th Frontier Scientists Workshop “Korea-France Environmental Biotechnology Workshop: Linking Theory and Practice”, The Korean Academy of Science and Technology, Nov 2020, Online, France Communication dans un congrès hal-03280523v1
Synthetic consortium of methanotrophy and phototrophy for biological methane conversion Jeong-Geol Na,Hando Ko,Jérôme Hamelin,Kim Milferstedt 28. online Frontier Scientists Workshop “Korea-France Environmental Biotechnology Workshop: Linking Theory and Practice”, Nov 2020, Online, France Communication dans un congrès hal-03739394v1
Recovery of value-added molecules from wastewater, example oxygenic photogranules Kim Milferstedt,Ahlem Filali,Jérôme Hamelin Convention of the Korean Civil Engineering Society 2019, Oct 2019, Pyungchang, South Korea Communication dans un congrès hal-02917621v1
Mapping the biological activity of a fluffy oxygenic photogranule Hicham Ouazaite,Kim Milferstedt,Jérôme Hamelin,Elie Desmond-Le Quéméner 9ème colloque annuel du Réseau National Biofilm, Dec 2019, Nancy, France Communication dans un congrès hal-02917616v1
Oxygenic photogranules: from ecology to wastewater treatment Kim Milferstedt,Esmee Joosten,Hicham Ouazaite,Elie Desmond-Le Quéméner,Jérôme Hamelin MicrobiOccitanie 2019 - Rencontre des Microbiologistes Région Occitanie, Région Occitanie. FRA., Feb 2019, Montpellier, France Communication dans un congrès hal-02791633v1
Naturally occuring cyanobacteria can form oxygenic photogranules to treat wastewater Esmee Joosten,Kim Milferstedt,Jérôme Hamelin 11. International conference on toxic cyanobacteria “Learning from the past to predict the future”, May 2019, Cracovie, Poland Communication dans un congrès hal-02735765v1
Experimental coalescence of microbial communities in anaerobic digesters Jérôme Hamelin,Kim Milferstedt Bridging theory and practice in ecological engineering, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jun 2018, Narbonne, France Communication dans un congrès hal-02786680v1
Optimizing the use of oxygenic photogranules for wastewater treatment in sequencing batch reactors Himanshu Kumar Khuntia,Kim Milferstedt,Jérôme Hamelin,Michel Torrijos Bridging theory and practice in ecological engineering, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jun 2018, Narbonne, France Communication dans un congrès hal-02786681v1
Deciphering the role of cyanobacteria for photogranulation through individual based modeling Hicham Ouazaite,Esmee Joosten,Elie Desmond-Le Quéméner,Kim Milferstedt,Jérôme Hamelin Bridging theory and practice in ecological engineering, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jun 2018, Narbonne, France Communication dans un congrès hal-02786936v1
Cyanobacterial abundance drives photogranulation Kim Milferstedt,Esmee Joosten,Jérôme Hamelin IWA Biofilms: Granular Sludge Conference, Delft University of Technology (DTU). NLD. International Water Association (IWA), INT., Mar 2018, Delft, Netherlands Communication dans un congrès hal-01799544v1
Substrate complexity favors community coalescence after mixing of methane-producing communities Kim Milferstedt,Diane Plouchart,Pawel Sierocinski,Angus Buckling,Jérôme Hamelin ISME17 - 17. International Symposium on Microbial Ecology, International Society for Microbial Ecology (ISME). Wageningen, INT., Aug 2018, Leipzig, Germany Communication dans un congrès hal-02737121v1
Présentation du LAMACs : Lab-scale Automated and Multiplexed Anaerobic Chemostat system Jérôme Hamelin Journées Nutrition et Ecosystèmes Microbiens - NEM 2018, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., May 2018, Narbonne, France Communication dans un congrès hal-02790981v1
Exploring minimum conditions allowing photogranulation Esmee Joosten,Hicham Ouazaite,Kim Milferstedt,Jérôme Hamelin Bridging theory and practice in ecological engineering, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jun 2018, Narbonne, France Communication dans un congrès hal-02786939v1
Ecological engineering of granular phototrophic ecosystems Kim Milferstedt,Jérôme Hamelin Bridging theory and practice in ecological engineering, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jun 2018, Narbonne, France Communication dans un congrès hal-02791635v1
ENgineerInG interactions in Methanogenic communities at the Ecosystem level - ENIGME Kim Milferstedt,Jérôme Hamelin,Benoît Jaillard,Jérôme Harmand,Jean-Jacques Godon MEM days (Meta’omics of the microbial ecosystems), Jan 2017, Paris, France Communication dans un congrès hal-02787610v1
Into the background of 16S rDNA sequencing data: looking for ‘rare’ sequences of pathogenic bacteria from DNA of biogas plant digestates Géraldine Maynaud,Anne-Marie Pourcher,Jean-Jacques Godon,Jérôme Hamelin,Nathalie Wéry NEM seminar (Nutrition et Ecosystèmes Microbiens), May 2017, Saint Pee sur Nivelle, France Communication dans un congrès hal-02785337v1
Ecological engineering for piloting bioprocesses Kim Milferstedt,Jérôme Hamelin Environmental Biotechnology Workshop, Inha University. KOR., Oct 2017, Incheon, South Korea Communication dans un congrès hal-02785336v1
Replication of experiments in anaerobic digestion: simpler, greater and easier than you had ever hoped Jérôme Hamelin,Diane Plouchart,Guillaume Guizard,Eric Latrille,Kim Milferstedt 15. IWA World Conference on Anaerobic Digestion (AD15), International Water Association (IWA). INT., Nov 2017, Beijing, China Communication dans un congrès hal-02733779v1
Formation of oxygenic photo-granules and its application for aeration-free wastewater treatment Chul Park,Ahmed S Abouhend,Wenye Camilla Kuo-Dahab,Caitlyn Butler,Kim Milferstedtet al. WEFTEC 2017 - 90. annual Water Environment Federation’s Annual Technical Exhibition and Conference, Water Environment Federation (WEF). USA., Sep 2017, Chicago, United States Communication dans un congrès hal-02737810v1
Ecological engineering of oxygenic photogranules for biotechnological applications Kim Milferstedt,Jérôme Hamelin Asia Biohydrogen and Biorefinery Symposium (ABBS 2016), Oct 2016, Jeju, South Korea Communication dans un congrès hal-02792673v1
Blending complex ecosystems: do microbial diversity or microbial interactions matter? Jérôme Hamelin NEM seminar (Nutrition et Ecosystèmes Microbiens), May 2016, Jouy-en-Josas, France Communication dans un congrès hal-02794096v1
Multiplexed chemostats: a smart way for serious testing of ecological theory Diane Plouchart,Kim Milferstedt,Eric Latrille,Guillaume Guizard,Jérôme Hamelin 16. International Symposium on Microbial Ecology - ISME16, International Society for Microbial Ecology (ISME). INT., Aug 2016, Montreal, Canada Communication dans un congrès hal-02739627v1
Photogranules may shake sewage treatment up Kim Milferstedt,Chul Park,Jérôme Hamelin 16. International Symposium on Microbial Ecology - ISME16, International Society for Microbial Ecology (ISME). INT., Aug 2016, Montreal, Canada Communication dans un congrès hal-02739957v1
Accessing virus genomes out of metagenomic data: improving statistical and bioinformatics analytic tools to better assess the contribution of phages on microbial ecosystems Marianne de Paepe,Eric Dugat-Bony,Jérôme Hamelin,Mahendra Mariadassou,Kim Milferstedtet al. Phages On Marseille, Nov 2016, Marseille, France. pp.1 Communication dans un congrès hal-01531724v1
Manager les ressources microbiennes impliquées dans la digestion anaérobie Marina Moletta-Denat,Jérôme Hamelin,Kim Milferstedt,Eric Trably Journées Recherche Industrie Biogaz-Méthanisation (JRI2015), Institut National de Recherche en Sciences et Technologies pour l'Environnement et l'Agriculture (IRSTEA). Rennes, FRA., Feb 2015, Rennes, France Communication dans un congrès hal-01163005v1
Filamentous cyanobacteria in granular biofilms containing microalgae and bacteria Kristie Stauch-White,Camilla Kuo-Dahab,Kim Milferstedt,Jérôme Hamelin,Chul Parket al. 249. American Chemical Society National Meeting & Exposition, American Chemical Society (ACS). USA., Mar 2015, Denver, United States Communication dans un congrès hal-02742286v1
Mixing ecosystems during start-up of anaerobic digesters improves final performance Jérôme Hamelin,Kim Milferstedt International Conference on Anaerobic Digestion. AD Technology and Microbial Ecology for Sustainable Development (ADTech2015), Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Feb 2015, Chiang Mai, Thailand Communication dans un congrès hal-01163002v1
Dynamique des communautés algales et bactériennes durant la colonisation de lagunes ouvertes : lien avec la communauté aéroportée Amandine Gales,Bruno Sialve,Jérôme Hamelin,Jean-Philippe Steyer,Nathalie Wéry 7. Colloque AFEM, Association Francophone d'Ecologie Microbienne (AFEM). FRA., Nov 2015, Anglet, France Communication dans un congrès hal-01512108v1
Integration of microalgae and anaerobic digestion within a biorefinery approach for reuse and/or recovery of human residues Nicolas Bernet,Amandine Gales,Jerome Hamelin,Arnaud Helias,Eric Latrilleet al. 1. International Seminar on Algal Technologies for Wastewater Treatment and Resource Recovery, United Nations Educational Scientific and Cultural Organization (UNESCO). INT., Apr 2015, Delft, Netherlands Communication dans un congrès hal-02742451v1
Neglecting the inoculum of anaerobic digesters: a missed opportunity? Jean-Jacques Godon,Kim Milferstedt,Jérôme Hamelin,Jean-Philippe Steyer 14. World Congress on Anaerobic Digestion (AD14), International Water Association (IWA). INT., Nov 2015, Viña del Mar, Chile Communication dans un congrès hal-02739859v1
Keynote: How to use molecular biology tools for the study of anaerobic digestion process? Angela Cabezas,Juliana Calabria de Araujo,Cecilia Callejas,Amandine Gales,Jérôme Hamelinet al. 14. World Congress on Anaerobic Digestion (AD14), International Water Association (IWA). INT., Nov 2015, Viña del Mar, Chile Communication dans un congrès hal-02740576v1
Diversity effects explain overyielding in assembled anaerobic foodwebs Kim Milferstedt,Jérôme Hamelin 15. International Symposium on Microbial Ecology ISME 15, Aug 2014, Seoul, South Korea Communication dans un congrès hal-02739651v1
The role of microbial diversity in ecosystem functioning : More than the sum of its part Jérôme Hamelin Séminaire à l’Université Catholique Pontificale de Valparaiso (PUCV), Pontificia Universidad Católica de Valparaíso (PUCV). Valparaiso, CHL., Dec 2014, Valparaiso, Chile Communication dans un congrès hal-02792012v1
Engineering and managing microbial ecosystems to obtain and maintain a desired process performance – Ecological (and molecular) approaches for biotechnological questions Kim Milferstedt,Jérôme Hamelin Seminar at Korean Institute for Energy Research, Korean Institute for Energy Research (KIER). Daejon, KOR., Aug 2014, Daejon, South Korea Communication dans un congrès hal-02792015v1
Robust estimation of phylogenetic diversity: steer clear of rare species Thibault Latrille,Bart Haegeman,Jérôme Hamelin Bioinformatique pour la Génomique Environnementale (BGE2014), May 2014, Lyon, France Communication dans un congrès hal-02739285v1
Dark fermentation of lignocellulosic biomass: byproducts of dilute acid hydrolysis of sunflower stalks provoke a metabolic shift from hydrogen/acetate/butyrate to lactate/ethanol Florian Monlau,Eric Trably,Jérôme Hamelin,Jean-Philippe Steyer,Hélène Carrère Réunion du réseau COST EUBis, Jan 2014, Toulouse, France Communication dans un congrès hal-02795644v1
Recycling anaerobic digestion effluents in microalgae culture Enrica Uggetti,Bruno Sialve,Eric Latrille,Jérôme Hamelin,Jean-Philippe Steyer Young Algaeneers Symposium (YAS2014), Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Apr 2014, Montpellier, France Communication dans un congrès hal-02739570v1
Is performance of anaerobic digestion dictated by the inoculum and traceable by bioindicators? Jérôme Hamelin,Valérie Bru-Adan,Jean-Jacques Godon,Kim Milferstedt 15. International Symposium on Microbial Ecology ISME 15, Aug 2014, Seoul, South Korea Communication dans un congrès hal-02741657v1
Estimation of Diversity: what we WANT and what we CAN estimate Jérôme Hamelin Seminar at Korean Institute for Energy Research (KIER), Korean Institute for Energy Research (KIER). Daejon, KOR., Aug 2014, Daejon, South Korea Communication dans un congrès hal-02792011v1
How can we best engineer and manage microbial ecosystems to obtain and maintain a desired process performance and stability? Kim Milferstedt,Jean-Jacques Godon,Jérôme Hamelin Réunion annuelle du réseau INRA Nutrition et Ecosystèmes Microbiens (NEM), Apr 2014, Clermont-Ferrand, France Communication dans un congrès hal-02792043v1
Combined alkaline- enzymatic pretreatments with sunflower stalks enhance biohydrogen production Florian Monlau,Eric Trably,Abdellatif Barakat,Jérôme Hamelin,Jean-Philippe Steyeret al. BioH2 2013, Aug 2013, Montreal, Canada Communication dans un congrès hal-02802920v1
Structuration spatiale des communautés microbiennes au cours de la dégradation et de la conversion de la lignocellulose en biogaz Jean-Charles Motte,Renaud R. Escudie,Jean-Philippe Steyer,Jérôme J. Hamelin,Nicolas Bernetet al. Journées thématiques du Réseau National Biofilm, Les Biofilms, Remue-Ménage aux Interfaces, Université de Pau et des Pays de l'Adour (UPPA). FRA., Nov 2013, Pau, France Communication dans un congrès hal-02805556v1
Biological control of microbial communities producing biohydrogen Eric Trably,Jérôme J. Hamelin,Eric Latrille,Yan Rafrafi,Isabelle Meynial-Salleset al. BioH2 2013, Aug 2013, Montreal, Canada Communication dans un congrès hal-02809567v1
New urban wastewater treatment with Autotrophic Membrane Bioreactor (AutoMBR) at low COD/N substrate ratio Yu Yang,Geoffroy Lesage,Maialen Barret,Nicolas Bernet,Alain Grasmicket al. 7. IWA Specialised Membrane Technology Conference and Exhibition for Water and Wastewater Treatment and Reuse, International Water Association (IWA). INT., Aug 2013, Toronto, Canada Communication dans un congrès hal-02808462v1
Acclimation of halophilic microbial communities from anaerobic sediments in continuous anaerobic bioreactors Alexis Mottet,Frédéric Habouzit,Jérôme J. Hamelin,Jean-Philippe Steyer 13. World Congress on Anaerobic Digestion: Recovering (bio) Resources for the World. AD13, International Water Association (IWA). IWA Anaerobic Digestion Specialist Group, INT., Jun 2013, Santiago de Compostela, Spain. 171 p Communication dans un congrès hal-02745503v1
Utilisation de facteurs biotiques de contrôle d’écosystèmes fermentaires Eric Trably,Yan Rafrafi,Jérôme J. Hamelin,Saida Benomar,Isabelle Meynial Salleset al. 9ème Congrès National de la Société Française de Microbiologie, Société Française de Microbiologie (SFM). FRA., Feb 2013, Lille, France Communication dans un congrès hal-02750289v1
Devenir de perturbateurs endocriniens et suivi de leur activité au cours de la digestion anaérobie de boues urbaines Florence Braun,N. Delgenes,Nicolas Creusot,Selim Ait-Aissa,Karyn Le Menachet al. International conference PNRPE 2012 "Recent advances on the environmental and health effects of endocrine disrupters", Dec 2012, Paris, France Communication dans un congrès ineris-00971108v1
Avancement du projet CreativERU Alain Grasmick,Mathieu Sperandio,Jérôme Hamelin,Juan Ochoa 7ème Journées Ecotechnologies, Nov 2012, Montpellier, France Communication dans un congrès hal-02810250v1
Use of biotic factors to stabilize or improve the fermentative hydrogen production in mixed cultures Yan Rafrafi,Marianne Quemeneur,Eric Trably,Eric Latrille,Jérôme J. Hamelinet al. 19. World Hydrogen Energy Conference - WHEC 2012, Canadian Hydrogen and Fuel Cell Association. CAN., Jun 2012, Toronto, Canada Communication dans un congrès hal-02744913v1
How does community structure affect performance of ecosystem function ? Kim Milferstedt,Jérôme Hamelin,Jean-Jacques Godon Journées des microbiologistes de l’INRA, Institut National de Recherche Agronomique (INRA). UAR Département Microbiologie et Chaîne Alimentaire (1194)., Nov 2012, Isle-sur-la-Sorgue, France Communication dans un congrès hal-02744895v1
Rôle des matériaux-supports sur la mise en place d’un biofilm. Impact sur le démarrage d’un réacteur anaérobie Frédéric Habouzit,Gaelle Gévaudan,Jérôme Hamelin,Jean-Philippe Steyer,Nicolas Bernet 5. Journées Thématiques, Les biofilms au service des biotechnologies, Bioénergies, Agro-alimentaire, Environnement, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jan 2012, Narbonne, France Communication dans un congrès hal-02746113v1
Chemical and toxicological assessments of anaerobic digesters removing EDCs Florence Braun,N. Delgenes,Nicolas Creusot,Selim Ait-Aissa,Karyn Le Menachet al. International conference PNRPE 2012 "Recent advances on the environmental and health effects of endocrine disrupters", Dec 2012, Paris, France Communication dans un congrès ineris-00971107v1
Rarity and the problem of measuring diversity Bart Haegeman,Jérôme Hamelin,John Moriarty,Peter Neal,Jonathan Dushoffet al. 14. International Symposium of Microbial Ecology (ISME14) "The Power of the Small", International Society for Microbial Ecology (ISME). INT., Aug 2012, Copenhague, Denmark Communication dans un congrès hal-01161658v1
Organic micropollutants degradation under anaerobic mesophilic condition with respect to the inoculum origin Florence Braun,Jérôme J. Hamelin,Jean-Philippe Steyer,Dominique Patureau 1. International Conference on Biogas Microbiology, Sep 2011, Leipzig, Germany Communication dans un congrès hal-02746629v1
How animals can help us on anaerobic digestion? The microbial and process engineering points of view Jean-Jacques J.-J. Godon,Laure L. Arcemisbehere,Jérôme J. Hamelin,Renaud Escudie Escudié,Théodore T. Bouchezet al. 1. International Conference on Biogas Microbiology, Sep 2011, Leipzig, Germany. KL3-2 page 18 Communication dans un congrès hal-01000584v1
Impact of hydraulic retention time (HRT) on biofilm development: molecular analysis and modelling of microbial competition Adeline Caylet,Renaud R. Escudie,Jérôme J. Hamelin,Doris Brockmann,Nicolas Bernet IWA Biofilm Conference 2011 Processes in Biofilms, Oct 2011, Shanghai, China Communication dans un congrès hal-02744610v1
Improvement of RNA-SIP by pyrosequencing to identify putative 4-n-nonylphenol degraders in activated sludge Olivier Zemb,Ml Guitierrez-Zammora,M. Lee,H. Chong,Jérôme Hamelinet al. Colloque Génomique Environnementale Lyon 2011, Nov 2011, Lyon, France Communication dans un congrès hal-02809518v1
Major role of sub-dominant bacteria in mixed cultures producing biohydrogen by dark fermentation Yan Rafrafi,Eric Trably,Eric Latrille,Jérôme J. Hamelin,Marie-Thérèse Guidici-Orticoniet al. 1. International Conference on Biogas Microbiology, Sep 2011, Leipzig, Germany Communication dans un congrès hal-02745801v1
Influence of total solids on bacterial and archaeal communities in semi-dry and dry anaerobic digestion Amel Abbassi,Eric Trably,Jérôme J. Hamelin,Claire Dumas,Jean Philippe J. P. Delgeneset al. 1. International Conference on Biogas Microbiology, Sep 2011, Leipzig, Germany Communication dans un congrès hal-02746311v1
Effects of lignocellulose-derived compounds on fermentative hydrogen-producing mixed cultures Marianne Quéméneur,Abdellatif Barakat,Eric Trably,Jérôme J. Hamelin,Jean-Philippe Steyeret al. 1. International Conference on Biogas Microbiology, Sep 2011, Leipzig, Germany Communication dans un congrès hal-02745239v1
Ecosystèmes en microplaques Jérôme Hamelin,Jean-Jacques Godon Réunion annuelle du réseau INRA Nutrition et Ecosystèmes Microbiens (NEM), Feb 2011, Nouzilly, France Communication dans un congrès hal-02802924v1
The dynamics of diversity of an activated sludge in artificially coupled microcosms mimicking ecosystems with increasing dispersal Jérôme Hamelin,Matthieu Bueche,Jean-Philippe Steyer,Jean-Jacques Godon IWA conference on Microbes in Wastewater & Waste Treatment, Bioremediation and Energy Production (MWT 2011, Institut National de Recherche Agronomique (INRA). UR Laboratoire de Biotechnologie de l'Environnement (0050)., Jan 2011, Goa, India Communication dans un congrès hal-02809882v1
Influence of support material properties on the adhesion and growth as a biofilm of a methanogenic consortium Frédéric Habouzit,Gaelle Gévaudan,Jérôme J. Hamelin,Jean-Philippe Steyer,Nicolas Bernet 12th World Congress on anaerobic digestion, Oct 2010, Guadalajara, Mexico Communication dans un congrès hal-02756550v1
Influence of total solid concentration on anaerobic digestion : from wet to dry technology Amel Abbassi-Guendouz,Eric Trably,Claire Dumas,Jérôme J. Hamelin,Jean Philippe J. P. Delgeneset al. Venice 2010 - Third International Symposium on Energy from Biomass and Waste, Nov 2010, Venise, Italy Communication dans un congrès hal-02751137v1
Diversity and the neutral chemostat: Experiment Jérôme J. Hamelin ESF Workshop on Theoretical Microbial Ecology, Feb 2008, Glasgow, United Kingdom Communication dans un congrès hal-02812892v1
Diversity of the nitrate reductase genes in the Pseudomonas genus L. Roussel-Delif,Sonia Tarnawski,Jérôme Hamelin,Laurent Philippot,Michel Aragnoet al. 1. FEMS congress of European microbiologists, Jun 2003, Ljubljana, Slovenia Communication dans un congrès hal-02761119v1
Influencce of elevated atmospheric pCO2 on the culturable nitrate-dissimilating Pseudomonas and their nitrate reductases in the rhizosphere of perennial grasses L. Roussel-Delif,Sonia Tarnawski,Jérôme Hamelin,Laurent Philippot,Michel Aragnoet al. International symposium : structure and function of soil microbiota, Sep 2003, Marburg, Germany Communication dans un congrès hal-02763171v1

Poster de conférence (15)

Inoculating the microbiota for functional control - a seemingly impossible undertaking, a reflection on deadlocks Jean-Jacques Godon,Kim Milferstedt,Jérôme Hamelin 19. International Symposium on Microbial Ecology (ISME19), Aug 2024, Cape Town, South Africa. 2024 Poster de conférence hal-04795112v1
Développement d’un protocole de co-extractions transcriptomiques et métabolomiques pour la caractérisation des photogranules oxygéniques Anaïs Séguéla,Roselyne Gautier,Jérôme Hamelin,Kim Milferstedt,Rémi Servienet al. 16. Journées du RFMF 2024, Jun 2024, Saint-Malo, France Poster de conférence hal-04613787v1
Suivi des communautés bactériennes endémiques et des pathogènes lors du retour au sol des eaux usées traitées Vincent Moulia,Nassim Ait Mouheb,Geoffroy Lesage,Jérôme Hamelin,Nathalie Weryet al. 18. Congrès de la Société Française de Génie des Procédés (SFGP 2022) « Sciences et Solutions technologiques pour la Transition », Nov 2022, Toulouse, France Poster de conférence hal-04151620v1
Effect of shear stress on the growth of a native microalgal-bacteria consortium in a pilot scale raceway treating urban wastewater Gaetano Zuccaro,Robert van Lis,Denis Loisel,Anaïs Bonnafous,Jordan Seiraet al. IWA Biofilm : Granular Sludge Conference, IWAlgae2019, Jul 2019, Valladolid, Spain Poster de conférence hal-02917632v1
Dynamic of algal and bacterial communities during colonization of open-water ponds: link with atmospheric microbial community Amandine Gales,Bruno Sialve,Jérôme Hamelin,Jean-Philippe Steyer,Nathalie Wéry 2. EMBO Conference on Aquatic Microbial Ecology (SAME-14), Aug 2015, Uppsala, Sweden. 2015 Poster de conférence hal-02738728v1
Is performance of anaerobic digestion dictated by the inoculum and traceable by bioindicators ? Kim Milferstedt,Valérie Bru-Adan,Jean-Jacques Godon,Jérôme Hamelin Gordon Research Conference “Applied & Environmental Microbiology: Microbes that Influence, Sustain and Protect Our Planet”, Jul 2015, South Hadley, United States. 2015 Poster de conférence hal-02792455v1
Dynamique et structure des communautés microbiennes dans des bioréacteurs à membrane de nitrification Maialen Barret,Yu Yang,Gaëlle Santa-Catalina,Nicolas Bernet,Jean-Jacques Godonet al. 6. Colloque de l'Association Francophone d'Ecologie Microbienne (AFEM) "Microbiologie Environnementale : du Gène à l’Ecosystème", Oct 2013, Parent, France. , 2013 Poster de conférence hal-02750245v1
Distribution spatiale des communautés microbiennes du système hydrothermal alcalin de la baie de Prony, Nouvelle Calédonie Marianne Quemeneur,Méline Bes,Anne Postec,Nan Mei,Jérôme Hamelinet al. 6. Colloque de l'Association Francophone d'Ecologie Microbienne (AFEM) "Microbiologie Environnementale : du Gène à l’Ecosystème", Oct 2013, Parent, France. 2013 Poster de conférence hal-02748380v1
Ingénierie écologique d’écosystèmes microbiens : impact de facteurs biotiques sur les réseaux métaboliques d’écosystèmes fermentaires Eric Trably,Yan Rafrafi,Jérôme Hamelin,Eric Latrille,Isabelle Meynial Salleset al. Journées des microbiologistes de l’INRA, Nov 2012, Isle-sur-la-Sorgue, France. 2012, Journées des Microbiologistes de l'INRA 2012 Poster de conférence hal-02745920v1
How to choose the best inoculum for starting an anaerobic digester? Kim Milferstedt,Aline Sandre,Jérôme Hamelin,Jean-Jacques Godon 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Copenhague, Denmark. 2012 Poster de conférence hal-02744473v1
Human microbiota drives indoor air microbes Carole Gaüzere,Marina Moletta-Denat,Jérôme Hamelin,Jean-Jacques Godon,Enric Robine 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Copenhague, Denmark. 2012 Poster de conférence hal-02748397v1
Similar organic micropollutants fate in anaerobic mesophilic digesters fed with the same contaminated sludge but exhibiting different microbial populations and different metabolisms Florence Braun,Jérôme Hamelin,Anaïs Bonnafous,Jean-Philippe Steyer,Dominique Patureau 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Copenhague, Denmark. 2012 Poster de conférence hal-02745508v1
Chemical and toxicological assessments of anaerobic digesters removing EDCs Florence Braun,Nadine Cathala-Delgenès,Nicolas Creusot,Sélim Aït-Aïssa,Karine Le Ménachet al. PNRPE 2012, Recent advances on the environmental and health effects of endocrine disrupters, Dec 2012, Paris, France. 2012 Poster de conférence hal-02808649v1
Microbial communities associated with alkaline hydrothermal systems of Prony Bay, New Caledonia Gaël Erauso,Anne Postec,Marianne Quemeneur,Fatma Benaïssa,Jérôme Hamelinet al. 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Copenhague, Denmark. 2012 Poster de conférence hal-02745796v1
Interspecies interactions for triggering the hydrogen fermentative metabolism in mixed cultures: biotic factors can stabilize or improve production Jérôme Hamelin,Yan Rafrafi,Marianne Quéméneur,Eric Latrille,Isabelle Meynial-Salleset al. 14. International Symposium on Microbial Ecology (ISME14) "The Power of the Small", Aug 2012, Copenhague, Denmark. 2012 Poster de conférence hal-02744935v1

Chapitre d'ouvrage (2)

Apport des développements méthodologiques multi-omiques en méthanisation Jérôme Hamelin,Kim Milferstedt,Olivier Chapleur,Elie Desmond-Le Quéméner René Moletta; Romain Cresson. La méthanisation, TEC&DOC, 2024, 978-2-7430-2673-8 Chapitre d'ouvrage hal-04664478v1
Biomasse et déchets pour la production de bioénergies Jean-Philippe Steyer,Eric Trably,Jérôme J. Hamelin L'énergie à découvert, 1ère ed., CNRS Editions, 345 p., 2013, A découvert, 978-2-271-07678-6 Chapitre d'ouvrage hal-02805325v1

Brevet (5)

Surr-O-Gate : Mise au point d’un surrogate de bactérie pathogène pour le suivi de l’hygiénisation du procédé de méthanisation et des pré/post-traitements Jérôme Hamelin,Malo Sanglier,Felipe Guilayn France, N° de brevet: Déclaration d'Invention DI-RV-23-0066. 2023 Brevet hal-04152531v1
Method of removing dissolved methane from a liquid composition using biomass in the form of granules and granules of biomass for implementing same Jérôme Hamelin,Kim Milferstedt,Anissa Sukma Safitri,Roald Kommedal,Philippe Sousbie France, Patent n° : EP20305063. 2020 Brevet hal-04152483v1
Use of Methanotrophic Oxygenic PhotoGranules (MOPG) for methane removal from effluent of any type of anaerobic digester Jérôme Hamelin,Kim Milferstedt,Anissa Sukma Safitri,Roald Kommedal,Philippe Sousbie France, Patent n° : Déclaration d'Invention DI-RV-19-0042. 2019 Brevet hal-04152468v1
A method for measuring the biological diversity of a sample Patrice Loisel,Bart Haegeman,Jérôme Hamelin,Jérôme Harmand,Jean-Jacques Godon France, Patent n° : EP 2203744 ( A1) - EP 2053401 (A1) - WO 2009053393 (A1). 2010, 42 p Brevet hal-01190324v1
A method for measuring the biological diversity of a sample Patrice Loisel,Bart Haegeman,Jérôme Hamelin,Jérôme Harmand,Jean-Jacques Godon France, Patent n° : EP 2203744 B1. 2008 Brevet hal-00860587v1

Pré-publication, Document de travail (1)

A single community dominates structure and function of a mixture of multiple methanogenic communities Pawel Sierocinski,Kim Milferstedt,Florian Bayer,Tobias Grosskopf,Mark Alstonet al. 2017 Pré-publication, Document de travail hal-02790868v1