Jerome Verdier

Identifiants chercheurs

IdHAL :

jerome-verdier

ORCID :

0000-0003-3039-2159

IdRef :

131201662

Publications

Article dans une revue (51)

Antimicrobial Peptides as Part of the Arsenal of Constitutive and Inducible Seed Defences in Tomato Seed Exudates Against Pathogens Łukasz P Tarkowski,Benjamin Hubert,Muriel Marchi,Camille Tranchant,Stéphanie Boutetet al. Molecular Plant Pathology, 2025, 26 (10), ⟨10.1111/mpp.70164⟩ Article dans une revue hal-05361526v1
Maternal environmental effects and climate-smart seeds: unlocking epigenetic inheritance for crop innovation in the seed industry Sophie Brunel-Muguet,Miroslav Baránek,Sotirios Fragkostefanakis,Christopher Sauvage,Michal Lieberman-Lazarovichet al. The Plant Journal, 2025, 123 (3), pp.e70407. ⟨10.1111/tpj.70407⟩ Article dans une revue hal-05206124v1
Life on the dry side: a roadmap to understanding desiccation tolerance and accelerating translational applications R. Marks,J. Ekwealor,M. Artur,L. Bondi,T. Boothbyet al. Nature Communications, 2025, 16 (1), pp.3284. ⟨10.1038/s41467-025-58656-y⟩ Article dans une revue hal-05027363v1
A stage‐dependent seed defense response to explain efficient seed transmission of Xanthomonas citri pv. fuscans to common bean Armelle Darrasse,Łukasz Paweł Tarkowski,Martial Briand,David Lalanne,Nicolas Chenet al. Plant, Cell and Environment, 2024, ⟨10.1111/pce.15037⟩ Article dans une revue hal-04665509v1
Dual Transcriptome of Post-Germinating Mutant Lines of Arabidopsis thaliana Infected by Alternaria brassicicola Mailen Ortega-Cuadros,Laurine Chir,Sophie Aligon,Nubia Velasquez,Tatiana Ariaset al. Data, 2024, 9 (11), pp.137. ⟨10.3390/data9110137⟩ Article dans une revue hal-04799033v1
Transcriptomic dataset of Phaseolus vulgaris leaves in response to the inoculation of pathogenic Xanthomonas citri pv. fuscans and its type III secretion system-defective mutant hrcV Christopher Gihaut,Chrystelle Brin,Martial Briand,Jérôme Verdier,Matthieu Barretet al. Data in Brief, 2024, 57, pp.110938. ⟨10.1016/j.dib.2024.110938⟩ Article dans une revue (data paper) hal-05263393v1
BASIC PENTACYSTEINE1 regulates ABI4 by modification of two histone marks H3K27me3 and H3ac during early seed development of Medicago truncatula Thi Thu Dang,David Lalanne,Joseph Ly Vu,Benoit Ly Vu,Johan Defayeet al. Frontiers in Plant Science, 2024, 15, ⟨10.3389/fpls.2024.1395379⟩ Article dans une revue hal-04665511v1
The re-establishment of desiccation tolerance in germinated tomato ( Solanum lycopersicum ) seeds Naoto Sano,Jerome Verdier Seed Science Research, 2024, pp.1-9. ⟨10.1017/S0960258524000047⟩ Article dans une revue hal-04665565v1
Genetic Variability in Seed Longevity and Germination Traits in a Tomato MAGIC Population in Contrasting Environments Elise Bizouerne,Joseph Ly Vu,Benoît Ly Vu,Isidore Diouf,F. Bittonet al. Plants, 2023, 12 (20), pp.3632. ⟨10.3390/plants12203632⟩ Article dans une revue hal-04258504v1
First whole genome assembly and annotation of a European common bean cultivar using PacBio HiFi and Iso-Seq data Sébastien Carrère,Baptiste Mayjonade,David Lalanne,Sylvain Gaillard,Jérôme Verdieret al. Data in Brief, 2023, 48, pp.109182. ⟨10.1016/j.dib.2023.109182⟩ Article dans une revue (data paper) hal-04089846v1
Arabidopsis transcriptome dataset of the response of imbibed wild-type and glucosinolate-deficient seeds to nitrogen-containing compounds Mailen Ortega-Cuadros,Sophie Aligon,Nubia Velasquez,Jerome Verdier,Philippe Grappin Data in Brief, 2023, 48, pp.Early access. ⟨10.1016/j.dib.2023.109047⟩ Article dans une revue (data paper) hal-04071365v1
Multichannel imaging for monitoring chemical composition and germination capacity of cowpea (Vigna unguiculata) seeds during development and maturation Gamal Elmasry,Nasser Mandour,Yahya Ejeez,Didier Demilly,Salim Al-Rejaieet al. The Crop Journal, 2022, 10 (5), pp.1399-1411. ⟨10.1016/j.cj.2021.04.010⟩ Article dans une revue hal-03335576v1
Seed Transmission of Pathogens: Non-Canonical Immune Response in Arabidopsis Germinating Seeds Compared to Early Seedlings against the Necrotrophic Fungus Alternaria brassicicola Mailen Ortega-Cuadros,Tiago Lodi de Souza,Romain Berruyer,Sophie Aligon,Sandra Pelletieret al. Plants, 2022, 11 (13), pp.1708. ⟨10.3390/plants11131708⟩ Article dans une revue hal-03728324v1
Chromatin dynamics associated with seed desiccation tolerance/sensitivity at early germination in Medicago truncatula Naoto Sano,Jaiana Jaiana.Malabarba@inrae.Fr Malabarba,Zhijuan Chen,Sylvain Gaillard,David Windelset al. Frontiers in Plant Science, 2022, 13, pp.1059493. ⟨10.3389/fpls.2022.1059493⟩ Article dans une revue hal-03919021v1
Dual-transcriptomic datasets evaluating the effect of the necrotrophic fungus Alternaria brassicicola on Arabidopsis germinating seeds Mailen Ortega-Cuadros,Laurine Chir,Sophie Aligon,Tatiana Arias,Jerome Verdieret al. Data in Brief, 2022, 44, pp.108530. ⟨10.1016/j.dib.2022.108530⟩ Article dans une revue (data paper) hal-03762060v1
Chromatin Immunoprecipitation dataset of H3ac and H3K27me3 histone marks followed by DNA sequencing of Medicago truncatula embryos during control and heat stress conditions to decipher epigenetic regulation of desiccation tolerance acquisition Jaiana Malabarba,Zhijuan Chen,David Windels,Jerome Verdier Data in Brief, 2022, 40, pp.107793. ⟨10.1016/j.dib.2022.107793⟩ Article dans une revue (data paper) hal-03538493v1
Genome-Wide Association Studies of Seed Performance Traits in Response to Heat Stress in Medicago truncatula Uncover MIEL1 as a Regulator of Seed Germination Plasticity Zhijuan Chen,Joseph Ly Vu,Benoit Ly Vu,Julia Buitink,Olivier Leprinceet al. Frontiers in Plant Science, 2021, 12, pp.673072. ⟨10.3389/fpls.2021.673072⟩ Article dans une revue hal-03251660v1
Dataset for transcriptome and physiological response of mature tomato seed tissues to light and heat during fruit ripening Elise Bizouerne,Benoit Ly Vu,Joseph Ly Vu,Jerome Verdier,Julia Buitinket al. Data in Brief, 2021, 34, pp.106671. ⟨10.1016/j.dib.2020.106671⟩ Article dans une revue (data paper) hal-03109929v1
Regulation of DNA (de)methylation positively impacts seed germination during seed development under heat stress Jaiana Jaiana.Malabarba@inrae.Fr Malabarba,David Windels,Wenjia Xu,Jerome Verdier Genes, 2021, 12 (3), ⟨10.3390/genes12030457⟩ Article dans une revue hal-03184120v1
RNA sequencing data for heat stress response in isolated Medicago truncatula seed tissues Zhijuan Chen,Benoit Ly Vu,Olivier Leprince,Jerome Verdier Data in Brief, 2021, pp.106726. ⟨10.1016/j.dib.2021.106726⟩ Article dans une revue (data paper) hal-03123816v1
Medicago ABI3 Splicing Isoforms Regulate the Expression of Different Gene Clusters to Orchestrate Seed Maturation David Lalanne,Jaiana Malabarba,Joseph Ly Vu,Michaela Hundertmark,Julien Delahaieet al. Plants, 2021, 10 (8), pp.1710. ⟨10.3390/plants10081710⟩ Article dans une revue hal-03329141v1
MtExpress, a Comprehensive and Curated RNAseq-based Gene Expression Atlas for the Model Legume Medicago truncatula Sebastien Carrere,Jerome Verdier,Pascal Gamas Plant and Cell Physiology, 2021, 62 (9), pp.1494-1500. ⟨10.1093/pcp/pcab110⟩ Article dans une revue hal-03420304v1
Gene co-expression analysis of tomato seed maturation reveals tissue-specific regulatory networks and hubs associated with the acquisition of desiccation tolerance and seed vigour Elise Bizouerne,Julia Buitink,Benoît Ly Vu,Joseph Ly Vu,Eddi Estebanet al. BMC Plant Biology, 2021, 21 (1), pp.124. ⟨10.1186/s12870-021-02889-8⟩ Article dans une revue hal-03162464v1
Genome-wide association study identified candidate genes for seed size and seed composition improvement in M. truncatula Zhijuan Chen,Vanessa Lancon-Verdier,Christine Le Signor,Yi-Min She,Yun Kanget al. Scientific Reports, 2021, 11 (1), pp.4224. ⟨10.1038/s41598-021-83581-7⟩ Article dans une revue hal-03181110v1
Mieux connaître les graines pour améliorer la résistance des plantes à la sécheresse Jerome Verdier Jardins de France. Revue de la Société Nationale d'Horticulture de France, 2020, 660, pp.59-61 Article dans une revue hal-04665452v1
Physical Dormancy Release in Medicago truncatula Seeds Is Related to Environmental Variations Juan Pablo Renzi,Jérôme Verdier,Juan Pablo Renzi,Martin Duchoslav,Jan Bruset al. Plants, 2020, 9 (4), pp.503. ⟨10.3390/plants9040503⟩ Article dans une revue hal-02886055v1
Snapshot of epigenetic regulation in legumes David Windels,Thu Thi Dang,Zhijuan Chen,Jerome Verdier Legume Science, 2020, ⟨10.1002/leg3.60⟩ Article dans une revue hal-03330781v1
The genome of cowpea (&lt;em&gt;Vigna unguiculata&lt;/em&gt; [L.] Walp.) Stefano Lonardi,María Muñoz-Amatriaín,Qihua Liang,Shengqiang Shu,Steve I Wanamakeret al. The Plant Journal, 2019, 98 (5), pp.767-782. ⟨10.1101/518969⟩ Article dans une revue hal-02619816v1
The genome of cowpea ( Vigna unguiculata [L.] Walp.) Stefano Lonardi,María Muñoz‐amatriaín,Qihua Liang,Shengqiang Shu,Steve Wanamakeret al. The Plant Journal, 2019, 98 (5), pp.767-782. ⟨10.1111/tpj.14349⟩ Article dans une revue hal-02449486v1
Utilization of Computer Vision and Multispectral imaging Techniques for Classification of Cowpea (Vigna unguiculata) Seeds Gamal Elmasry,Nasser Mandour,Marie-Hélène Wagner,Didier Demilly,Jérôme Verdieret al. Plant Methods, 2019, 15 (1), pp.24. ⟨10.1186/s13007-019-0411-2⟩ Article dans une revue hal-02307748v1
Lessons from anhydrobiosis in seeds: How not to die when dry Julia Buitink,Jérôme Verdier,Olivier Leprince Cryobiology, 2018, 85, pp.132. ⟨10.1016/j.cryobiol.2018.10.060⟩ Article dans une revue hal-02618215v1
Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation Lekha T. Pazhamala,Shilp Purohit,Rachit K. Saxena,Vanika Garg,L. Krishnamurthyet al. Journal of Experimental Botany, 2017, 68 (8), pp.2037-2054. ⟨10.1093/jxb/erx010⟩ Article dans une revue hal-01608236v1
Analysis of Large Seeds from Three Different Medicago truncatula Ecotypes Reveals a Potential Role of Hormonal Balance in Final Size Determination of Legume Grains Kaustav Bandyopadhyay,Orhan Uluçay,Michael Udvardi,Jérôme Verdier International Journal of Molecular Sciences, 2016, 17 (9), pp.1472. ⟨10.3390/ijms17091472⟩ Article dans une revue hal-01602846v1
Metabolic engineering of proanthocyanidin production by repressing the isoflavone pathways and redirecting anthocyanidin precursor flux in legume Penghui Li,Qiang Dong,Shujun Ge,Xianzhi He,Jérôme Verdieret al. Plant Biotechnology Journal, 2016, 14 (7), pp.1604-1618. ⟨10.1111/pbi.12524⟩ Article dans une revue hal-02631617v1
Modelling of change in permeability induced by dilatancy for brittle geomaterials Said Rahal,Alain Sellier,Jérôme Verdier Construction and Building Materials, 2016, 125, pp.613-624. ⟨10.1016/j.conbuildmat.2016.08.002⟩ Article dans une revue hal-01849704v1
A Snapshot of Functional Genetic Studies in Medicago truncatula Yun Kang,Minguye Li,Senjuti Sinharoy,Jérôme Verdier Frontiers in Plant Science, 2016, 7 (August), pp.1-22. ⟨10.3389/fpls.2016.01175⟩ Article dans une revue hal-02630848v1
The Vigna unguiculata Gene Expression Atlas (VuGEA) from de novo assembly and quantification of RNA-seq data provides insights into seed maturation mechanisms Shaolun Yao,Chuan Jiang,Ziyue Huang,Ivone Torres-Jerez,Junil Changet al. The Plant Journal, 2016, 88 (2), pp.318-327. ⟨10.1111/tpj.13279⟩ Article dans une revue hal-01608926v1
ITIS, a bioinformatics tool for accurate identification of transposon insertion sites using next-generation sequencing data Chuan Jiang,Chao Chen,Ziyue Huang,Renyi Liu,Jérôme Verdier BMC Bioinformatics, 2015, 16 (1), pp.72. ⟨10.1186/s12859-015-0507-2⟩ Article dans une revue hal-01605647v1
Inference of Longevity-Related Genes from a Robust Coexpression Network of Seed Maturation Identifies Regulators Linking Seed Storability to Biotic Defense-Related Pathways Karima Righetti,Joseph Vu,Sandra Pelletier,Benoit Ly Vu,Enrico Glaabet al. The Plant cell, 2015, 27 (10), pp.2692-2708. ⟨10.1105/tpc.15.00632⟩ Article dans une revue hal-01392707v1
Regulation of legume seed size by an endosperm-expressed transcription factor Mélanie Noguero,Christine Le Signor,Vanessa Vernoud,Gregoire G. Aubert,Myriam Sanchezet al. Legume Perspectives, 2015, 7, pp.12-13 Article dans une revue hal-02632679v1
DASH transcription factor impacts &lt;em&gt;Medicago truncatula&lt;/em&gt; seed size by its action on embryo morphogenesis and auxin homeostasis Mélanie Noguero,Christine Le Signor,Vanessa Vernoud,Kaustav Bandyopadhyay,Myriam Sanchezet al. The Plant Journal, 2015, 81 (3), pp.453-466. ⟨10.1111/tpj.12742⟩ Article dans une revue hal-02635451v1
A combined histology and transcriptome analysis unravels novel questions on Medicago truncatula seed coat Jérôme Verdier,Fabrice Dessaint,Charles Schneider,Mona Abirached-Darmency Journal of Experimental Botany, 2013, 64 (2), pp.459 - 470. ⟨10.1093/jxb/ers304⟩ Article dans une revue hal-02647621v1
A Regulatory Network-Based Approach Dissects Late Maturation Processes Related to the Acquisition of Desiccation Tolerance and Longevity of Medicago truncatula Seeds Jérôme Verdier,David Lalanne,Sandra Pelletier,Ivone Torres-Jerez,Karima Righettiet al. Plant Physiology, 2013, 163 (2), pp.757 - 774. ⟨10.1104/pp.113.222380⟩ Article dans une revue hal-01209940v1
Establishment of theLotus japonicusGene Expression Atlas (LjGEA) and its use to explore legume seed maturation Jérôme Verdier,Ivone Torres-Jerez,Mingyi Wang,Andry Andriankaja,Stacy N. Allenet al. The Plant Journal, 2013, 74 (2), pp.351-362. ⟨10.1111/tpj.12119⟩ Article dans une revue hal-01606864v1
LegumeGRN: a gene regulatory network prediction server for functional and comparative studies. Mingyi Wang,Jérôme Verdier,Vagner A Benedito,Yuhong Tang,Jeremy D Murrayet al. PLoS ONE, 2013, 8 (7), pp.e67434. ⟨10.1371/journal.pone.0067434⟩ Article dans une revue hal-01601327v1
The 'atom-splitting' moment of synthetic biology Alex J Valentine,Aleysia Kleinert,Jérome Verdier EMBO Reports, 2012, 13 (8), pp.677-379. ⟨10.1038/embor.2012.95⟩ Article dans une revue hal-01601354v1
MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatula Jérôme Verdier,Jian Zhao,Ivone Torres-Jerez,Shujun Ge,Chenggang Liuet al. Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (5), pp.1766-1771. ⟨10.1073/pnas.1120916109⟩ Article dans une revue hal-01601885v1
Optimizing TILLING populations for reverse genetics in Medicago truncatula Christine Le Signor,Vincent V. Savois,Gregoire G. Aubert,Jérôme Verdier,Marie Nicolaset al. Plant Biotechnology Journal, 2009, 7 (5), pp.430-441. ⟨10.1111/j.1467-7652.2009.00410.x⟩ Article dans une revue hal-02661499v1
Transcriptional regulation of storage protein synthesis during dicotyledon seed filling Jérôme Verdier,Richard Thompson Plant and Cell Physiology, 2008, 49 (9), pp.1263-1271. ⟨10.1093/pcp/pcn116⟩ Article dans une revue hal-02658752v1
Gene expression profiling of M. truncatula transcription factors identifies putative regulators of grain legume seed filling Jérôme Verdier,Klementina Kakar,Karine Gallardo Guerrero,Christine Le Signor,Gregoire G. Aubertet al. Plant Molecular Biology, 2008, 67 (6), pp.567-580. ⟨10.1007/s11103-008-9320-x⟩ Article dans une revue istex hal-02660481v1
A gene expression atlas of the model legume Medicago truncatula Vagner A. Benedito,Ivone Torres-Jerez,Jeremy D. Murray,Andry Andriankaja,Stacy Allenet al. The Plant Journal, 2008, 55 (3), pp.504-513. ⟨10.1111/j.1365-313X.2008.03519.x⟩ Article dans une revue hal-02668894v1

Brevet (2)

Molecular means to extend desiccation tolerance during seed germination Jerome Verdier,Naoto Sano,Jaiana Malabarba France, Patent n° : EP23306545. 2023 Brevet hal-04665263v1
Methods and compositions for regulating production of proanthocyanidins Jérôme Verdier,Jian Zhao,Michael Udvardi,Richard Dixon France, Patent n° : US 9121031 B2. 2015 Brevet hal-01607879v1