Jonathan Romiguier

Présentation

Chargé de recherche CNRS

Publications

Article dans une revue (33)

One mother for two species via obligate cross-species cloning in ants Y. Juvé,C. Lutrat,A. Ha,A. Weyna,E. Laurouaet al. Nature, 2025, 646 (8084), pp.372-377. ⟨10.1038/s41586-025-09425-w⟩ Article dans une revue hal-05252088v2
A La Carte Seed Harvesting: &lt;i&gt;Messor barbarus&lt;/i&gt; Ants Select Durum Wheat Genotypes Clément Plessis,Aline Rocher,Frédéric Compan,Jonathan Romiguier,Jacques Davidet al. Ecology and Evolution, 2025, 15 (10), pp.e72251. ⟨10.1002/ece3.72251⟩ Article dans une revue hal-05361550v1
Phylogenomics of &lt;i&gt;Messor&lt;/i&gt; harvester ants (Hymenoptera: Formicidae: Stenammini) unravels their biogeographical origin and diversification patterns Yannick Juvé,Arthur Weyna,Elodie Lauroua,Sabine Nidelet,Mourad Khaldiet al. Systematic Entomology, 2025, 50 (4), pp.1025-1040. ⟨10.1111/syen.12693⟩ Article dans une revue hal-05202932v2
Pathogen-specific social immunity is associated with erosion of individual immune function in an ant Florent Masson,Rachael Louise Brown,Joel Vizueta,Thea Irvine,Zijun Xionget al. Nature Communications, 2024, 15 (1), pp.9260. ⟨10.1038/s41467-024-53527-4⟩ Article dans une revue hal-04790157v1
Both nuclear and cytoplasmic polymorphisms are involved in genetic conflicts over male fertility in the gynodioecious snail, &lt;i&gt;Physa acuta&lt;/i&gt; Fanny Laugier,Nathanaëlle Saclier,Kévin Béthune,Axelle Braun,Lara Konecny-Dupréet al. Evolution - International Journal of Organic Evolution, 2024, 78 (7), pp.1227-1236. ⟨10.1093/evolut/qpae053⟩ Article dans une revue hal-04707802v1
The impact of social complexity on the efficacy of natural selection in termites Camille Roux,Alice Ha,Arthur Weyna,Morgan Lode,Jonathan Romiguier Peer Community Journal, 2024, 4, pp.e101. ⟨10.24072/pcjournal.476⟩ Article dans une revue hal-04790167v1
Recombination Rate Variation in Social Insects: An Adaptive Perspective Timothy Delory,Jonathan Romiguier,Olav Rueppell,Karen Kapheim Annual Review of Genetics, 2024, 58, pp.159-181. ⟨10.1146/annurev-genet-111523-102550⟩ Article dans une revue (article de synthèse) hal-04790124v1
Social network position is a major predictor of ant behavior, microbiota composition, and brain gene expression Tomas Kay,Joanito Liberti,Thomas Richardson,Sean Mckenzie,Chelsea Weitekampet al. PLoS Biology, 2023, 21 (7), pp.e3002203. ⟨10.1371/journal.pbio.3002203⟩ Article dans une revue hal-04301989v1
Ant phylogenomics reveals a natural selection hotspot preceding the origin of complex eusociality Jonathan Romiguier,Marek Borowiec,Arthur Weyna,Quentin Helleu,Etienne Loireet al. Current Biology, 2022, 32 (13), pp.942 - 2947.e4. ⟨10.1016/j.cub.2022.05.001⟩ Article dans une revue hal-03685595v1
Detection of F1 Hybrids from Single-genome Data Reveals Frequent Hybridization in Hymenoptera and Particularly Ants Arthur Weyna,Lucille Bourouina,Nicolas Galtier,Jonathan Romiguier Molecular Biology and Evolution, 2022, 39 (4), pp.msac071. ⟨10.1093/molbev/msac071⟩ Article dans une revue hal-03686117v1
DILS: Demographic inferences with linked selection by using ABC Christelle Fraïsse,Iva Popovic,Clément Mazoyer,Bruno Spataro,Stephane Delmotteet al. Molecular Ecology Resources, 2021, ⟨10.1111/1755-0998.13323⟩ Article dans une revue hal-03156998v1
Hybridization enables the fixation of selfish queen genotypes in eusocial colonies Arthur Weyna,Jonathan Romiguier,Charles Mullon Evolution Letters, 2021, ⟨10.1002/evl3.253⟩ Article dans une revue hal-03356584v1
Vulnerability to Fishing and Life History Traits Correlate with the Load of Deleterious Mutations in Teleosts Jonathan Rolland,Dolph Schluter,Jonathan Romiguier Molecular Biology and Evolution, 2020, 37 (8), pp.2192-2196. ⟨10.1093/molbev/msaa067⟩ Article dans une revue hal-03024742v1
Mitochondrial genomics reveals the evolutionary history of the porpoises (Phocoenidae) across the speciation continuum. Yacine Ben Chehida,Julie Thumloup,Cassie Schumacher,Timothy Harkins,Alex Aguilaret al. Scientific Reports, 2020, 10 (1), pp.15190. ⟨10.1038/s41598-020-71603-9⟩ Article dans une revue hal-03020351v1
MitoFinder: Efficient automated large-scale extraction of mitogenomic data in target enrichment phylogenomics Rémi Allio,Alex Schomaker‐bastos,Jonathan Romiguier,Francisco Prosdocimi,Benoit Nabholzet al. Molecular Ecology Resources, 2020, 20, pp.892-905. ⟨10.1111/1755-0998.13160⟩ Article dans une revue hal-02869919v1
Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion Nicolas Galtier,Camille Roux,Marjolaine Rousselle,Jonathan Romiguier,Emeric Figuetet al. Molecular Biology and Evolution, 2018, 35 (5), pp.1092 - 1103. ⟨10.1093/molbev/msy015⟩ Article dans une revue hal-01806906v1
Phylogenomics of palearctic Formica species suggests a single origin of temporary parasitism and gives insights to the evolutionary pathway toward slave-making behaviour Jonathan Romiguier,Jonathan Rolland,Claire Morandin,Laurent Keller BMC Evolutionary Biology, 2018, 18 (1), ⟨10.1186/s12862-018-1159-4⟩ Article dans une revue hal-02397984v1
The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: the effects of sequencing techniques and sampling strategies Christelle Fraïsse,Camille Roux,Pierre-Alexandre Gagnaire,Jonathan Romiguier,Nicolas Faivreet al. PeerJ, 2018, 6, ⟨10.7717/peerj.5198⟩ Article dans une revue hal-01882981v1
Extensive recent secondary contacts between four European white oak species Thibault Leroy,Camille Roux,Laure Villate,Catherine Bodénès,Jonathan Romiguieret al. New Phytologist, 2017, 214 (2), pp.865-878. ⟨10.1111/nph.14413⟩ Article dans une revue hal-01608621v1
Shedding Light on the Grey Zone of Speciation along a Continuum of Genomic Divergence Camille Roux,Christelle Fraïsse,Jonathan Romiguier,Yoann Anciaux,Nicolas Galtieret al. PLoS Biology, 2016, 14 (12), ⟨10.1371/journal.pbio.2000234⟩ Article dans une revue hal-01899028v1
Biased Gene Conversion and GC-Content Evolution in the Coding Sequences of Reptiles and Vertebrates Emeric Figuet,Marion Ballenghien,Jonathan Romiguier,Nicolas Galtier Genome Biology and Evolution, 2015, 7 (1), pp.240-250. ⟨10.1093/gbe/evu277⟩ Article dans une revue hal-01900679v1
L’investissement parental des espèces animales prédit leur diversité génétique Nicolas Galtier,Jonathan Romiguier Médecine/Sciences, 2015, 31 (1), pp.17-19. ⟨10.1051/medsci/20153101005⟩ Article dans une revue hal-03035755v1
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition Claudia C. Weber,Bastien Boussau,Jonathan Romiguier,Erich D. Jarvis,H. Ellegren Genome Biology, 2014, 15, pp.549. ⟨10.1186/s13059-014-0549-1⟩ Article dans une revue hal-02045537v1
Comparative population genomics in animals uncovers the determinants of genetic diversity Jonathan Romiguier,P Gayral,M Ballenghien,Arnaud Bernard,V Cahaiset al. Nature, 2014, 515 (7526), pp.261-263. ⟨10.1038/nature13685⟩ Article dans une revue hal-01313724v1
OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals Emmanuel J.P. Douzery,Celine Scornavacca,Jonathan Romiguier,Khalid Belkhir,Nicolas Galtieret al. Molecular Biology and Evolution, 2014, 31 (7), pp.1923-1928. ⟨10.1093/molbev/msu132⟩ Article dans une revue hal-01133634v1
Mitochondrial DNA as a tool for reconstructing past life-history traits in mammals Emeric Figuet,Jonathan Romiguier,Julien y Dutheil,Nicolas Galtier Journal of Evolutionary Biology, 2014, 27 (5), pp.899 - 910. ⟨10.1111/jeb.12361⟩ Article dans une revue hal-01900719v1
Population genomics of eusocial insects: the costs of a vertebrate-like effective population size Jonathan Romiguier,Joao M. Lourenco,Philippe Gayral,Nicolas Faivre,Lucy A Weinertet al. Journal of Evolutionary Biology, 2014, 2 7, pp.5 9 3 - 6 0 3. ⟨10.1111/jeb.12331⟩ Article dans une revue hal-01082760v1
K r /K c but not d N /d S correlates positively with body mass in birds, raising implications for inferring lineage-specific selection Claudia C Weber,Jonathan Romiguier,Benoit Nabholz,Hans Ellegren Genome Biology, 2014, 15 (12), pp.542. ⟨10.1186/s13059-014-0542-8⟩ Article dans une revue hal-01919685v1
Genomic evidence for large, long-lived ancestors to placental mammals. Jonathan Romiguier,Vincent Ranwez,Emmanuel J.P. Douzery,Nicolas Galtier Molecular Biology and Evolution, 2013, 30 (1), pp.5-13. ⟨10.1093/molbev/mss211⟩ Article dans une revue hal-01268010v1
Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placentalmammals Jonathan Romiguier,Vincent Ranwez,Frédéric Delsuc,Nicolas Galtier,Emmanuel J.P. Douzery Molecular Biology and Evolution, 2013, 30 (9), pp.2134-2144. ⟨10.1093/molbev/mst116⟩ Article dans une revue hal-01268462v1
Fast and robust characterization of time-heterogeneous sequence evolutionary processes using substitution mapping. Jonathan Romiguier,Emeric Figuet,Nicolas Galtier,Emmanuel J.P. Douzery,Bastien Boussauet al. PLoS ONE, 2012, 7 (3), pp.e33852. ⟨10.1371/journal.pone.0033852⟩ Article dans une revue hal-00965722v1
Efficient selection of branch-specific models of sequence evolution. Julien y Dutheil,Nicolas Galtier,Jonathan Romiguier,Emmanuel J.P. Douzery,Vincent Ranwezet al. Molecular Biology and Evolution, 2012, 29 (7), pp.1861-1874. ⟨10.1093/molbev/mss059⟩ Article dans une revue hal-00965698v1
Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes Jonathan Romiguier,Vincent Ranwez,Emmanuel J P Douzery,Nicolas Galtier Genome Research, 2010, 20 (8), pp.1001 - 1009. ⟨10.1101/gr.104372.109⟩ Article dans une revue hal-03327982v1

Communication dans un congrès (2)

A red queen under the shell: snails as a new model to study cyto-nuclear conflicts and gynodioecy Patrice David,Fanny Laugier,Jonathan Romiguier,Emilien Luquet International conference in Ecology & Evolution, Société Française d’Écologie et Évolution (SFE2), Oct 2024, Lyon, France Communication dans un congrès hal-04886925v1
Mito-nuclear interactions and gynodioecy in the freswhater snail Patrice David,Mathilde Dufaÿ,Philippe Jarne,Tristan Lefébure,Emilien Luquetet al. Simultaneously Hermaphroditic Organisms Workshop, Patrice David, Mar 2020, Montpellier, France Communication dans un congrès hal-04870529v1

Poster de conférence (1)

A la carte seed harvesting: Messor barbarus selects durum wheat genotypes Clément Plessis,A Rocher,F Compan,Jonathan Romiguier,J Davidet al. Congress of the European Society for Evolutionary Biology (ESEB 2025), Aug 2025, Barcelona, Spain. , pp.P01.230 Poster de conférence hal-05226187v1

Autre publication scientifique (1)

Relaxation of purifying selection suggests low effective population size in eusocial Hymenoptera and solitary pollinating bees Arthur Weyna,Jonathan Romiguier 2021, pp.e2. ⟨10.24072/pcjournal.3⟩ Autre publication scientifique hal-03685372v2

Pré-publication, Document de travail (1)

Evolutionary history of the porpoises ( Phocoenidae ) across the speciation continuum: a mitogenome phylogeographic perspective Yacine Ben Chehida,Julie Thumloup,Cassie Schumacher,Timothy Harkins,Alex Aguilaret al. 2020 Pré-publication, Document de travail (preprint/prepublication) hal-02915433v1

Thèse (1)

Phylogénomique et stratégies d'histoires de vie des mammifères placentaires : apports de la théorie de la conversion génique biaisée Jonathan Romiguier Sciences du Vivant [q-bio]. Université Montpellier 2 (Sciences et Techniques), 2012. Français. ⟨NNT : ⟩ Thèse tel-02809876v1