Julie Coloigner

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Publications

Article dans une revue (24)

Evaluating lesion-specific preprocessing pipelines for rs-fMRI in stroke patients: Impact on functional connectivity and behavioral prediction Alix Lamouroux,Julie Coloigner,Pierre Maurel,Nicolas Farrugia,Giulia Lioi Imaging Neuroscience, 2025, 3, pp.1-16. ⟨10.1162/IMAG.a.6⟩ Article dans une revue hal-05115858v1
Graph Slepian Framework for Guided Filtering With Application to Neuroimaging Sébastien Dam,Julie Coloigner,Dimitri van De Ville IEEE Transactions on Biomedical Engineering, 2025, pp.1-10. ⟨10.1109/TBME.2025.3628058⟩ Article dans une revue hal-05353573v1
Multimodal Graph Convolutional Network on Brain Structure and Function in Adolescent Anxiety and Depression Sébastien Dam,Jean-Marie Batail,Pierre Maurel,Julie Coloigner IEEE Transactions on Signal and Information Processing over Networks, 2025, 11, pp.617-629. ⟨10.1109/TSIPN.2025.3577354⟩ Article dans une revue hal-04764608v1
A Riemannian framework for incorporating white matter bundle priors in ODF-based tractography algorithms. Thomas Durantel,Gabriel Girard,Emmanuel Caruyer,Olivier Commowick,Julie Coloigner PLoS ONE, In press, pp.1-10 Article dans une revue hal-04246380v1
Microstructural brain assessment in late-life depression and apathy using diffusion MRI multi-compartments models and tractometry Renaud Hédouin,Jean-Charles Roy,Thomas Desmidt,Gabriel Robert,Julie Coloigner Scientific Reports, 2024, 14 (1), pp.18193. ⟨10.1038/s41598-024-67535-3⟩ Article dans une revue hal-04685291v1
fMRIStroke: A preprocessing pipeline for fMRI Data from Stroke patients Alix Lamouroux,Giulia Lioi,Julie Coloigner,Pierre Maurel,Nicolas Farrugia Journal of Open Source Software, 2024, 9 (103), pp.6636. ⟨10.21105/joss.06636⟩ Article dans une revue hal-04837034v1
Quantifying Apathy in Late-Life Depression: Unraveling Neurobehavioral Links through Daily Activity Patterns and Brain Connectivity Analysis Jean-Charles Roy,Renaud Hédouin,Thomas Desmidt,Sébastien Dam,Iris Miréa-Grivelet al. Biological Psychiatry: Cognitive Neuroscience and Neuroimaging, 2024, pp.1-30. ⟨10.1016/j.bpsc.2024.04.002⟩ Article dans une revue hal-04564336v1
Structural Brain Connectivity and Treatment Improvement in Mood Disorder Sébastien Dam,Jean-Marie Batail,Gabriel Robert,Dominique Drapier,Pierre Maurelet al. Brain connectivity, 2024, 14 (4), pp.239-251. ⟨10.1089/brain.2023.0063⟩ Article dans une revue inserm-04515217v3
Brain BOLD and NIRS response to hyperoxic challenge in sickle cell disease and chronic anemias Chau Vu,Adam Bush,Matthew Borzage,Soyoung Choi,Julie Coloigneret al. Magnetic Resonance Imaging, 2023, 100, pp.26-35. ⟨10.1016/j.mri.2023.03.002⟩ Article dans une revue hal-04284976v1
Connectivity patterns of the core resting-state networks associated with apathy in late-life depression Jean-Charles Roy,Thomas Desmidt,Sébastien Dam,Iris Mirea-Grivel,Louise Weylet al. Journal of Psychiatry and Neuroscience, 2023, 48 (6), pp.E404 - E413. ⟨10.1503/jpn.230008⟩ Article dans une revue hal-04295208v1
Quantitative perfusion mapping with induced transient hypoxia using BOLD MRI Chau Vu,Yaqiong Chai,Julie Coloigner,Aart J Nederveen,Matthew Borzageet al. Magnetic Resonance in Medicine, 2021, 85 (1), pp.168-181. ⟨10.1002/mrm.28422⟩ Article dans une revue inserm-02913689v1
Tract‐specific analysis and neurocognitive functioning in sickle cell patients without history of overt stroke Yaqiong Chai,Chaoran Ji,Julie Coloigner,Soyoung Choi,Melissa Balderramaet al. Brain and Behavior, 2021, 11 (3), ⟨10.1002/brb3.1978⟩ Article dans une revue hal-04513348v1
The impact of Neurofeedback on effective connectivity networks in chronic stroke patients: an exploratory study Giulia Lioi,Adolfo Veliz,Julie Coloigner,Quentin Duché,Simon Butetet al. Journal of Neural Engineering, 2021, 18 (5), pp.056052. ⟨10.1088/1741-2552/ac291e⟩ Article dans une revue hal-03354296v1
Structural abnormalities associated with poor outcome of a major depressive episode: the role of thalamus. Jean-Marie Batail,Julie Coloigner,Marine Soulas,Gabriel Robert,Christian Barillotet al. Psychiatry Research: Neuroimaging, 2020, 305, pp.1-10. ⟨10.1016/j.pscychresns.2020.111158⟩ Article dans une revue hal-02920551v1
Transient Hypoxia Model Revealed Cerebrovascular Impairment in Anemia Using BOLD MRI and Near‐Infrared Spectroscopy Julie Coloigner,Chau Vu,Matthew Borzage,Adam Bush,Soyoung Choiet al. Journal of Magnetic Resonance Imaging, 2020, 52 (5), pp.1400-1412. ⟨10.1002/jmri.27210⟩ Article dans une revue inserm-02913695v1
White matter abnormalities in depression: a categorical and phenotypic diffusion MRI study. Julie Coloigner,Jean-Marie Batail,Olivier Commowick,Isabelle Corouge,Gabriel Robertet al. Neuroimage-Clinical, 2019, 22, pp.101710. ⟨10.1016/j.nicl.2019.101710⟩ Article dans une revue inserm-01938407v1
White matter has impaired resting oxygen delivery in sickle cell patients Yaqiong Chai,Adam Bush,Julie Coloigner,Aart Nederveen,Benita Tamraziet al. American Journal of Hematology, 2019, 94 (4), pp.467-474. ⟨10.1002/ajh.25423⟩ Article dans une revue inserm-02174474v1
Patients with sickle-cell disease exhibit greater functional connectivity and centrality in the locus coeruleus compared to anemic controls Ravi Bhatt,Lonnie Zeltzer,Julie Coloigner,John Wood,Tom Coateset al. Neuroimage-Clinical, 2019, 21, pp.101686. ⟨10.1016/j.nicl.2019.101686⟩ Article dans une revue inserm-02174466v1
Graph Lasso-based test for evaluating functional brain connectivity in sickle cell disease Julie Coloigner,Ronald Phlypo,Thomas D. Coates,Nastasha Lepore,John C Wood Brain connectivity, 2017, 7 (7), ⟨10.1089/brain.2016.0474⟩ Article dans une revue hal-01658272v1
Contrasting resting-state fMRI abnormalities from sickle and non-sickle anemia Julie Coloigner,Yeun Kim,Adam Bush,Soyoung Choi,Melissa Balderramaet al. PLoS ONE, 2017, 12 (10), pp.e0184860. ⟨10.1371/journal.pone.0184860⟩ Article dans une revue hal-01710679v1
A novel classification method for prediction of rectal bleeding in prostate cancer radiotherapy based on a semi-nonnegative ICA of 3D planned dose distributions Julie Coloigner,Aureline Fargeas,Amar Kachenoura,Lu Wang,Gael Dréanet al. IEEE Journal of Biomedical and Health Informatics, 2015, 9 (3), pp.1168-1177. ⟨10.1109/JBHI.2014.2328315⟩ Article dans une revue hal-01011843v1
On feature extraction and classification in prostate cancer radiotherapy using tensor decompositions. Auréline Fargeas,Laurent Albera,Amar Kachenoura,Gaël Dréan,Juan-David Ospinaet al. Medical Engineering & Physics, 2015, 37 (1), pp.126-31. ⟨10.1016/j.medengphy.2014.08.009⟩ Article dans une revue istex inserm-01119187v1
Line search and trust region strategies for canonical decomposition of semi-nonnegative semi-symmetric 3rd order tensors Julie Coloigner,Ahmad Karfoul,Laurent Albera,Pierre Comon Linear Algebra and its Applications, 2014, 450, pp.334-374. ⟨10.1016/j.laa.2014.02.001⟩ Article dans une revue hal-00945606v1
Semi-nonnegative joint diagonalization by congruence and semi-nonnegative ICA Julie Coloigner,Laurent Albera,Amar Kachenoura,Fanny Noury,Lotfi Senhadji Signal Processing, 2014, 105, pp.185-197. ⟨10.1016/j.sigpro.2014.05.017⟩ Article dans une revue inserm-01006599v1

Communication dans un congrès (33)

Integrating Functional and Structural Brain Connectomes: a novel multilayer graphs framework for Alzheimer's disease classification Carlo Ferritto,Giulia Lioi,Pierre-Yves Jonin,Julie Coloigner EUSIPCO 2025 - 33rd European Signal Processing Conference, Sep 2025, Isola delle Femmine, Italy. pp.1-4 Communication dans un congrès hal-05238535v1
Optimized Multilayer Graphs for Integrating Functional and Structural Connectivity in Alzheimer's Disease Classification Carlo Ferritto,Pierre-Yves Jonin,Giulia Lioi,Julie Coloigner NetSci 2025 - International School and Conference on Network Science, Jun 2025, Maastricht, Netherlands. pp.1-1 Communication dans un congrès hal-05238559v1
Improved Riemannian FOD averaging for fiber bundle priors incorporation in FOD-based tractography algorithms Grégoire Ville,Emmanuel Caruyer,Julie Coloigner IST 2025 - International Society for Tractography, Oct 2025, Bordeaux, France. pp.1-1 Communication dans un congrès hal-05425887v1
Data-driven identification of functional network changes in Neurofeedback stroke rehabilitation: A clinical validation of network-based statistics Alix Lamouroux,Julie Coloigner,Pierre Maurel,Nicolas Farrugia,Isabelle Bonanet al. EUSIPCO 2025 - 33rd European Signal Processing Conference, Sep 2025, Palerme, Italy. pp.1522-1526 Communication dans un congrès hal-05271292v1
Multi-compartment tractometry approach for white matter neuroinflammation investigation in late-life depression Nathan Decaux,Gabriel Robert,Julie Coloigner IST 2025 - International Society for Tractography Conference, Oct 2025, Bordeaux, France Communication dans un congrès hal-05458484v1
Réseau de neurones convolutifs sur graphes multimodal pour l'étude de la structure et de la fonction cérébrales dans l'anxiété et la dépression à l'adolescence Sébastien Dam,Jean-Marie Batail,Pierre Maurel,Julie Coloigner IABM 2025 - 3ème édition du Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale, Mar 2025, Nice, France. pp.1-3 Communication dans un congrès hal-04905297v1
Two Modalities, One Network: A Multilayer Graph Framework for Alzheimer's Disease Biomarkers Carlo Ferritto,Giulia Lioi,Pierre-Yves Jonin,Julie Coloigner BraYn 2025 - 8 th Conference, the Brainstorming Research Assembly for Young Neuroscientists, Oct 2025, Turin, Italy Communication dans un congrès hal-05384103v1
Graph Wavelet Packets for the Classification of Brain Data in Anxiety and Depression Sébastien Dam,Pierre Maurel,Julie Coloigner EUSIPCO 2024 - 32nd European conference on signal processing, Aug 2024, Lyon, France. pp.1-5 Communication dans un congrès hal-04683535v1
SOS-MUSIC, a subspace approach for EEG source imaging promoting sparsity of active sources Carla Joud,Laurent Albera,Isabelle Merlet,Julie Coloigner EUSIPCO 2024 - 32nd European signal processing conference, Aug 2024, Lyon, France. pp.1-5 Communication dans un congrès hal-04685505v1
263. Treatment Resistant Versus Non-Resistant Depression: A Whole-Brain Morphometry Replication Study in Young Adults Marie-Laure Paillère Martinot,Jean-Charles Roy,Julie Coloigner,Renaud Hédouin,Jean-Luc Martinotet al. 2024 - Society of Biological Psychiatry’s Meeting, May 2024, Austin (TX), United States. pp.S207-S207, ⟨10.1016/j.biopsych.2024.02.762⟩ Communication dans un congrès hal-04685004v1
GSP-DERIVED BRAIN FEATURES FOR CLASSIFICATION IN ANXIETY AND DEPRESSION Sébastien Dam,Pierre Maurel,Julie Coloigner ISBI 2024 - 21st IEEE International Symposium on Biomedical Imaging, May 2024, Athens, Greece Communication dans un congrès hal-04770983v2
A convolutional Wasserstein distance for tractography evaluation : complementary study to state-of-the-art measures Thomas Durantel,Julie Coloigner,Olivier Commowick ISBI 2022 - IEEE International Symposium on Biomedical Imaging, Mar 2022, Calcutta, India. ⟨10.1109/ISBI52829.2022.9761650⟩ Communication dans un congrès hal-03630777v1
Imaging biomarker discovery in major depressive disorder with diffusion MRI multi-compartment models Renaud Hedouin,Olivier Commowick,Julie Coloigner OHBM 2022 - 28th Annual Meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom Communication dans un congrès inserm-03934869v1
Shape-based features of white matter fiber-tracts associated with outcome in Major Depression Disorder Claire Cury,Jean-Marie Batail,Julie Coloigner MICCAI 2022 - International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2022, Singapour, Singapore. pp.163-173, ⟨10.1007/978-3-031-16431-6_16⟩ Communication dans un congrès hal-03798593v1
Structural and functional interplay in anxiety related classification: a graph signal processing approach Giovanna Orrù,Pierre Maurel,Julie Coloigner ISBI 2021 - IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice, France. pp.1-4 Communication dans un congrès hal-03450470v1
Effect of prenatal organic solvent exposure on structural connectivity at childhood Julie Coloigner,Anne-Claire Binter,Elise Bannier,Jean-Christophe Ferré,Cécile Chevrieret al. ISBI 2019 - 16th IEEE International Symposium on Biomedical Imaging, Apr 2019, Venise, Italy. pp.151-154, ⟨10.1109/ISBI.2019.8759473⟩ Communication dans un congrès inserm-02176376v1
Structural connectivity analysis in treatment-resistant depression Julie Coloigner,Jean-Marie Batail,Dominique Drapier,Christian Barillot OHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-2 Communication dans un congrès hal-02176403v1
Hyperoxia Challenge in Healthy and Anemic Subjects using BOLD MRI Chau Vu,Julie Coloigner,John Wood ISMRM, May 2019, Montreal, France Communication dans un congrès inserm-02159373v1
Diffusion MRI as a descriptive imaging marker of the pathogenesis of treatment-resistant depression Julie Coloigner,Jean-Marie Batail,Isabelle Corouge,Jean-Christophe Ferré,Dominique Drapieret al. ISMRM 2018 - International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2 Communication dans un congrès hal-01812087v1
Diffusion MRI as an imaging marker of depression from a large and homogenous population study Julie Coloigner,Jean-Marie Batail,Isabelle Corouge,Jean-Christophe Ferré,Dominique Drapieret al. ISMRM 2018 - International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2 Communication dans un congrès hal-01812093v1
Fiber connection density based on in sickle cell disease Julie Coloigner,Jacob Anthony,Rosa Vlosova,Adam Bush,Soyoung Choiet al. 25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, Hawaii, United States Communication dans un congrès hal-01792310v1
Parametric Mapping of Oxygen Activity in Human Placenta across Gestation using in utero BOLD imaging Vidya Rajagopalan,Vince Schmithorst,Julie Coloigner,Jessica Winowski,Matthew Borzageet al. 25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, United States Communication dans un congrès hal-01792319v1
An experimental investigation of labeling efficiency for pseudo-continuous arterial spin labeling Yaqiong Chai,Adam Bush,Julie Coloigner,Xiaoping Qu,Jonathan Chiaet al. 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI 2016), Apr 2016, Prague, France. ⟨10.1109/ISBI.2016.7493458⟩ Communication dans un congrès hal-01710699v1
BOLD delay times using group delay in sickle cell disease Julie Coloigner,Chau Vu,Adam Bush,Matt Borzage,Vidya Rajagopalanet al. SPIE Medical Imaging, Feb 2016, San Diego, United States. ⟨10.1117/12.2217263⟩ Communication dans un congrès hal-01710721v1
The 3D EdgeRunner Pipeline: a novel shape-based analysis for neoplasms characterization Fernando Yepes-C,Rebecca Johnson,Yi Lao,Darryl Hwang,Julie Coloigneret al. SPIE Medical Imaging 2016, Feb 2016, San Diego, CA, United States. ⟨10.1117/12.2217238⟩ Communication dans un congrès hal-01710708v1
Functional connectivity analysis for thalassemia disease based on a graphical lasso model Julie Coloigner,Ronald Phlypo,Adam Bush,Natasha Lepore,John Wood ISBI 2016 - IEEE International Symposium on Biomedical Imaging, Apr 2016, Prague, Czech Republic. pp.1295 - 1298, ⟨10.1109/ISBI.2016.7493504⟩ Communication dans un congrès hal-01355161v1
DTI analysis in patients with sickle cell disease Julie Coloigner,Daniela Sacchetto,Jeff Tanedo,Maxime Descoteaux,Thomas D. Coateset al. 46th Society For Neuroscience conference, 2016, San Diego, United States Communication dans un congrès hal-01792302v1
Low-frequency fluctuation amplitude analysis of resting-state fMRI for sickle cell disease patients Julie Coloigner,Yeun Kim,Adam Bush,Matt Borzage,Vidya Rajagopalanet al. 11th International Symposium on Medical Information Processing and Analysis, 2015, Cuenca-Ecuador, Ecuador Communication dans un congrès hal-01792258v1
Tract specific analysis in patients with sickle cell disease Yaqiong Chai,Julie Coloigner,Xiaoping Qu,Soyoung Choi,Adam Bushet al. 11th International Symposium on Medical Information Processing and Analysis (SIPAIM 2015), Nov 2015, Cuenca, France. ⟨10.1117/12.2213617⟩ Communication dans un congrès hal-01710727v1
Analysis of Hemodynamic Changes and Bold Signals of Sickle Cell Disease Patients during Desaturation Julie Coloigner,Chau Vu,Matt Borzage,Adam Bush,Natasha Leporeet al. 57th American Society of Hematology (ASH) conference, 2015, Orlando, United States Communication dans un congrès hal-01792249v1
Décomposition de tableaux d'ordre trois semi-nonnégatifs et semi-symétriques Julie Coloigner,Laurent Albera,Ahmad Karfoul,Pierre Comon GRETSI 11, Vingt-troisième colloque sur le Traitement du Signal et des Images, Sep 2011, Bordeaux, France. pp.4 Communication dans un congrès hal-00659973v1
Canonical decomposition of semi-symmetric semi-nonnegative three-way arrays . Julie Coloigner,Laurent Albera,Amar Kachenoura,Lotfi Senhadji Signals, Systems and Computers (ASILOMAR), Nov 2011, Pacific Grove, CA, United States. pp.444 - 448, ⟨10.1109/ACSSC.2011.6190038⟩ Communication dans un congrès hal-00908655v1
Semi-nonnegative Independent Component Analysis: The (3,4)-SENICAexp Method. Julie Coloigner,Laurent Albera,Ahmad Karfoul,Amar Kachenoura,Pierre Comonet al. Proceedings of the 9th International Conference Latent Variable Analysis and Signal Separation LVA/ICA 2010, Sep 2010, St. Malo, France. pp.612-619, ⟨10.1007/978-3-642-15995-4_76⟩ Communication dans un congrès istex hal-00910705v1

Poster de conférence (6)

Quantification par IRM T2 - Du végétal au cerveau Benjamin Prigent,Julie Coloigner,Marc Lapert,Erick Jorge Canales-Rodríguez,Guylaine Collewetet al. SFRMBM 2025 - Société Française de Résonance Magnétique en Biologie et Médecine, Mar 2025, Saint-Malo, France. 2025 Poster de conférence hal-05241198v1
SOS-MUSIC: A subspace approach for EEG source imaging promoting sparsity of active sources Carla Joud,Laurent Albera,Julie Coloigner,Isabelle Merlet EUSIPCO 2024 - 32nd European signal processing conference, Aug 2024, Lyon, France. pp.1-1, 2024 Poster de conférence hal-04685536v1
Imaging biomarker discovery in major depressive disorder with diffusion MRI multi-compartment models Renaud Hedouin,Olivier Commowick,Gabriel Robert,Julie Coloigner OHBM 2022 - 28th Annual Meeting of the Organization of Human Brain Mapping, Jun 2022, Glasgow, United Kingdom. pp.1-1 Poster de conférence inserm-03934921v1
The effect of neurofeedback training on effective connectivity assessed with dynamic causal modeling in stroke patients – a pilot study Giulia Lioi,Adolfo Veliz,Julie Coloigner,Quentin Duché,Simon Butetet al. WFNR 2020 - World Federation For NeuroRehabilitation, Oct 2020, Lyon, France Poster de conférence hal-03354319v1
White matter connectivity analysis in patients suffering from depression. Julie Coloigner,Jean-Marie Batail,Isabelle Corouge,Dominique Drapier,Christian Barillot 2018 - 7ème Forum de l’Institut de Psychiatrie, Sep 2018, Amiens, France. pp.1 Poster de conférence hal-01890087v1
Diffuse T1-MRI White Matter Volume Decrease in Patients with Sickle Cell Disease Soyoung Choi,Adam Bush,Matt Borzage,Anand Joshi,Vidya Rajagopalanet al. 21sy Annual meeting of the Organization for Human Brain Mapping, Apr 2015, Honolulu, HI, United States. Poster de conférence hal-01792279v1

Pré-publication, Document de travail (1)

Mind the Brain Age: How Segmentation and Template Selection Reshape Structural Connectomes Carlo Ferritto,Giulia Lioi,Pierre-Yves Jonin,Julie Coloigner 2026 Pré-publication, Document de travail hal-05446129v1

Thèse (1)

Line search and trust regions strategies for canonical decomposition of semi-nonnegative and semi-symmetric tensors Julie Coloigner Signal and Image Processing. Université de Rennes, 2012. English. ⟨NNT : 2012REN1S172⟩ Thèse tel-05233422v1

HDR (1)

Cerebral functional and structural connectivity analysis Julie Coloigner Signal and Image Processing. Université Rennes, 2024 HDR tel-05235800v1