Juliette Hayer Researcher at IRD, MIVEGEC research unit

Identifiants chercheurs

IdHAL :

juliette-hayer

ORCID :

0000-0003-4899-9637

Publications

Article dans une revue (26)

Genomic insights into an extensively drug-resistant and hypervirulent Burkholderia dolosa N149 isolate of a novel sequence type (ST2237) from a Vietnamese patient hospitalised for stroke Quang Huy Nguyen,Cam Linh Nguyen,Thai Son Nguyen,Bich Ngoc Do,Thi Thanh Tam Tranet al. Journal of Global Antimicrobial Resistance, 2024, 37, pp.44-47. ⟨10.1016/j.jgar.2024.02.009⟩ Article dans une revue hal-04675721v1
ESBL-producing Escherichia coli prevalence and sharing across seabirds of central Chile Tania Suarez-Yana,Marília Salgado-Caxito,Juliette Hayer,Zulma Esperanza Rojas-Sereno,Mario Sergio Pino-Hurtadoet al. Science of the Total Environment, 2024, 951, pp.175475. ⟨10.1016/j.scitotenv.2024.175475⟩ Article dans une revue hal-04939749v1
Whole-genome sequence and resistance determinants of four Elizabethkingia anophelis clinical isolates collected in Hanoi, Vietnam Florian Commans,Juliette Hayer,Bich Ngoc Do,Thi Thanh Tam Tran,Thi Thu Hang Leet al. Scientific Reports, 2024, 14 (1), pp.7241. ⟨10.1038/s41598-024-57564-3⟩ Article dans une revue hal-04869908v1
Multiple clonal transmissions of clinically relevant extended-spectrum beta-lactamase–producing Escherichia coli among livestock, dogs, and wildlife in Chile Juliette Hayer,Marília Salgado-Caxito,Andrés Opazo-Capurro,Paulina González Muñoz,Javier Millánet al. Journal of Global Antimicrobial Resistance, 2023, 34, pp.247-252. ⟨10.1016/j.jgar.2023.07.009⟩ Article dans une revue hal-04273440v1
Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance Juliette Hayer,Jacques Dainat,Ella Marcy,Anne-Laure Bañuls Journal of Open Source Software, 2023, 8 (90), pp.5397. ⟨10.21105/joss.05397⟩ Article dans une revue hal-04273434v1
Screening for atypical porcine pestivirus in Swedish boar semen used for artificial insemination and a characterisation of the seminal RNA microbiome including the virome Hedvig Stenberg,Maja Malmberg,Juliette Hayer BMC Veterinary Research, 2023, 19 (1), pp.219. ⟨10.1186/s12917-023-03762-6⟩ Article dans une revue hal-04273423v1
Genomic epidemiology of carbapenemase-producing Gram-negative bacteria at the human-animal-environment interface in Djibouti city, Djibouti Hasna Saïd Mohamed,Lokman Galal,Juliette Hayer,Julio Benavides,Anne-Laure Bañulset al. Science of the Total Environment, 2023, 905, pp.167160. ⟨10.1016/j.scitotenv.2023.167160⟩ Article dans une revue hal-04273420v1
Large-scale analysis of putative plasmids in clinical multidrug-resistant Escherichia coli isolates from Vietnamese patients Quang Huy Nguyen,Thi Thu Hang Le,Son Thai Nguyen,Kieu-Oanh Thi Nguyen,Dong Van Quyenet al. Frontiers in Microbiology, 2023, 14, pp.1094119. ⟨10.3389/fmicb.2023.1094119⟩ Article dans une revue hal-04275497v1
Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV Pontus Öhlund,Nicolas Delhomme,Juliette Hayer,Jenny Hesson,Anne-Lie Blomström International Journal of Molecular Sciences, 2022, 23 (2), pp.875. ⟨10.3390/ijms23020875⟩ Article dans une revue hal-04275521v1
Congenital tremor and splay leg in piglets – insights into the virome, local cytokine response, and histology Hedvig Stenberg,Stina Hellman,Lisa Lindström,Magdalena Jacobson,Caroline Fossumet al. BMC Veterinary Research, 2022, 18 (1), pp.348. ⟨10.1186/s12917-022-03443-w⟩ Article dans une revue hal-04275509v1
Identification and molecular characterization of highly divergent RNA viruses in cattle, Uganda. Stephen Balinandi,Juliette Hayer,Harindranath Cholleti,Michelle Wille,Julius Lutwamaet al. Virus Research, 2022, 313, pp.198739. ⟨10.1016/j.virusres.2022.198739⟩ Article dans une revue hal-04275514v1
Four novel picornaviruses detected in Magellanic Penguins (Spheniscus magellanicus) in Chile Juliette Hayer,Michelle Wille,Alejandro Font,Marcelo González-Aravena,Helene Norderet al. Virology, 2021, 560, pp.116-123. ⟨10.1016/j.virol.2021.05.010⟩ Article dans une revue hal-04275544v1
Small RNA Response to Infection of the Insect-Specific Lammi Virus and Hanko Virus in an Aedes albopictus Cell Line Pontus Öhlund,Juliette Hayer,Jenny Hesson,Anne-Lie Blomström Viruses, 2021, 13 (11), pp.2181. ⟨10.3390/v13112181⟩ Article dans une revue hal-04275536v1
Evolutionary genetics of canine respiratory coronavirus and recent introduction into Swedish dogs Michelle Wille,Jonas Johansson Wensman,Simon Larsson,Renaud van Damme,Anna-Karin Theelkeet al. Infection, Genetics and Evolution, 2020, 82, pp.104290. ⟨10.1016/j.meegid.2020.104290⟩ Article dans une revue hal-04275591v1
Simulating Illumina metagenomic data with InSilicoSeq Hadrien Gourlé,Oskar Karlsson-Lindsjö,Juliette Hayer,Erik Bongcam-Rudloff Bioinformatics, 2019, 35 (3), pp.521-522. ⟨10.1093/bioinformatics/bty630⟩ Article dans une revue hal-04275660v1
Viromics Reveal a Number of Novel RNA Viruses in Swedish Mosquitoes Pontus Öhlund,Juliette Hayer,Hanna Lundén,Jenny Hesson,Anne-Lie Blomström Viruses, 2019, 11 (11), pp.1027. ⟨10.3390/v11111027⟩ Article dans une revue hal-04275650v1
Genetic characterization of a novel picorna-like virus in Culex spp. mosquitoes from Mozambique Harindranath Cholleti,Juliette Hayer,Jose Fafetine,Mikael Berg,Anne-Lie Blomström Virology Journal, 2018, 15 (1), pp.71. ⟨10.1186/s12985-018-0981-z⟩ Article dans une revue hal-04406517v1
Viral metagenomics reveals the presence of highly divergent quaranjavirus in&lt;i&gt;Rhipicephalus&lt;/i&gt;ticks from Mozambique Harindranath Cholleti,Juliette Hayer,Fernando Chanisso Mulandane,Kerstin Falk,Jose Fafetineet al. Infection Ecology & Epidemiology, 2018, 8 (1), pp.1478585. ⟨10.1080/20008686.2018.1478585⟩ Article dans une revue hal-04406520v1
Phylogenomic analysis of the complete sequence of a gastroenteritis-associated cetacean adenovirus (bottlenose dolphin adenovirus 1) reveals a high degree of genetic divergence Maja Malmberg,Consuelo Rubio-Guerri,Juliette Hayer,Daniel García-Párraga,Elvira Nieto-Pelegrínet al. Infection, Genetics and Evolution, 2017, 53, pp.47 - 55. ⟨10.1016/j.meegid.2017.05.008⟩ Article dans une revue hal-04409148v1
The Intestinal Eukaryotic Virome in Healthy and Diarrhoeic Neonatal Piglets Oskar E Karlsson,Jenny Larsson,Juliette Hayer,Mikael Berg,Magdalena Jacobson PLoS ONE, 2016, 11 (3), pp.e0151481. ⟨10.1371/journal.pone.0151481⟩ Article dans une revue hal-04409235v1
Discovery of Novel Viruses in Mosquitoes from the Zambezi Valley of Mozambique Harindranath Cholleti,Juliette Hayer,Ana Paula Abilio,Fernando Chanisso Mulandane,Jenny Verner-Carlssonet al. PLoS ONE, 2016, 11 (9), pp.e0162751. ⟨10.1371/journal.pone.0162751⟩ Article dans une revue hal-04409113v1
The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions Philipp Engel,Waldan K Kwong,Quinn Mcfrederick,Kirk E Anderson,Seth Michael Barribeauet al. mBio, 2016, 7 (2), ⟨10.1128/mbio.02164-15⟩ Article dans une revue hal-04409211v1
MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies Martin Norling,Oskar E Karlsson-Lindsjö,Hadrien Gourlé,Erik Bongcam-Rudloff,Juliette Hayer PLoS ONE, 2016, 11 (8), pp.e0160334. ⟨10.1371/journal.pone.0160334⟩ Article dans une revue hal-04409183v1
Ultradeep Pyrosequencing and Molecular Modeling Identify Key Structural Features of Hepatitis B Virus RNase H, a Putative Target for Antiviral Intervention. Juliette Hayer,Christophe Rodriguez,Georgios Germanidis,Gilbert Deléage,Fabien Zoulimet al. Journal of Virology, 2014, 88 (1), pp.574-82. ⟨10.1128/JVI.03000-13⟩ Article dans une revue inserm-00940367v1
HBVdb: a knowledge database for Hepatitis B Virus Juliette Hayer,Fanny Jadeau,G. Deleage,Alan Kay,Fabien Zoulimet al. Nucleic Acids Research, 2012, 41 (D1), pp.D566-D570. ⟨10.1093/nar/gks1022⟩ Article dans une revue hal-04406497v1
Mutations that alter use of hepatitis C virus cell entry factors mediate escape from neutralizing antibodies. Isabel Fofana,Samira Fafi-Kremer,Patric Carolla,Catherine Fauvelle,Muhammad Nauman Zahidet al. Gastroenterology, 2012, 143 (1), pp.223-233.e9. ⟨10.1053/j.gastro.2012.04.006⟩ Article dans une revue inserm-00701511v1

Pré-publication, Document de travail (1)

“This training is bound for glory” : selection by experimental evolution of a bacteriophage with expanded host-range and increased virulence Amandine Maurin,Marie Vasse,Carlos Zarate-Chaves,Cécile Breyton,Sarah Bouzidiet al. 2024 Pré-publication, Document de travail hal-04759544v1

Thèse (1)

Développement d'une base de connaissances du virus de l'hépatite B, HBVdb, pour l'étude de la résistance aux traitements : intégration d'outils d'analyses de séquences et application à la modélisation moléculaire de la polymérase Juliette Hayer Biologie cellulaire. Université Claude Bernard - Lyon I, 2013. Français. ⟨NNT : 2013LYO10023⟩ Thèse tel-01175811v1