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Intense and localized export of selected marine snow types at eddy edges in the South Atlantic Ocean
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Pathways for converting zooplankton traits to ecological insights are paved with findable, accessible, interoperable, and reusable (FAIR) data practices
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A Lagrangian perspective reveals the carbon and oxygen budget of an oceanic eddy
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Oceanographic features boost latitudinal patterns in copepod body size distribution in the South Atlantic
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Article dans une revue
hal-04886306
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Global census of the significance of giant mesopelagic protists to the marine carbon and silicon cycles
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Article dans une revue
hal-04590880
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First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices
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Combining in situ and ex situ plankton image data to reconstruct zooplankton (>1 mm) volume and mass distribution in the global ocean
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hal-04777755
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New Estimate of Organic Carbon Export From Optical Measurements Reveals the Role of Particle Size Distribution and Export Horizon
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Article dans une revue
hal-04659682
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Structures of coexisting marine snow and zooplankton in coastal waters of Svalbard (European Arctic)
Emilia Trudnowska
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Katarzyna Błachowiak-Samołyk
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Article dans une revue
hal-04661039
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Morphological diversity increases with decreasing resources along a zooplankton time series
Miriam Beck
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Article dans une revue
hal-04385533
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Monitoring and modelling marine zooplankton in a changing climate
Lavenia Ratnarajah
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Angus Atkinson
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Article dans une revue
hal-04020893
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Towards a distributed and operational pelagic imaging network
Rainer Kiko
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Rubens Lopes
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Y. Dodji Soviadan
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Lars Stemmann
Article dans une revue
hal-04660327
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Ocean-wide comparisons of mesopelagic planktonic community structures
Janaina Rigonato
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Marko Budinich
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Alejandro Murillo
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Manoela Brandão
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Article dans une revue
hal-04184772
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Patterns of mesozooplankton community composition and vertical fluxes in the global ocean
Yawouvi Dodji Soviadan
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Article dans une revue
hal-03449715
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Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
Tom Delmont
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Article dans une revue
hal-03872935
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Machine Learning for the Study of Plankton and Marine Snow from Images
Jean-Olivier Irisson
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Sakina-Dorothée Ayata
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Dhugal Lindsay
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Lee Karp-Boss
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Lars Stemmann
Article dans une revue
hal-03335138
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Establishing Plankton Imagery Dataflows Towards International Biodiversity Data Aggregators
Patricia Martin-Cabrera
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Ruben Perez Perez
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Jean-Olivier Irrison
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Fabien Lombard
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Article dans une revue
hal-03958791
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Global Distribution of Zooplankton Biomass Estimated by In Situ Imaging and Machine Learning
Laetitia Drago
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Jean-Olivier Irisson
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Marcel Babin
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Article dans une revue
hal-03810062
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Temporal fluctuations in zooplankton size, abundance, and taxonomic composition since 1995 in the North Western Mediterranean Sea
Guillaume Feuilloley
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Jean-Marc Fromentin
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Claire Saraux
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Jean-Olivier Irisson
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Laetitia Jalabert
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Article dans une revue
hal-03374991
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Priorities for ocean microbiome research
Andre Abreu
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Adam Gristwood
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Romain Troublé
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Article dans une revue
hal-03781942
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A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5
Rainer Kiko
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David Antoine
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Marcel Babin
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Léo Berline
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Article dans une revue
hal-03794258
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Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome
Ahmed Zayed
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James Wainaina
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Guillermo Dominguez-Huerta
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Eric Pelletier
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Jiarong Guo
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Article dans une revue
hal-03872940
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Constraining the Particle Size Distribution of Large Marine Particles in the Global Ocean With In Situ Optical Observations and Supervised Learning
D. J. Clements
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S. Yang
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T. Weber
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A. M. P. Mcdonnell
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R. Kiko
et al.
Article dans une revue
insu-03688125
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The Underwater Vision Profiler 6: an imaging sensor of particle size spectra and plankton, for autonomous and cabled platforms
Marc Picheral
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Denis Brousseau
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Article dans une revue
hal-03508179
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Machine learning techniques to characterize functional traits of plankton from image data
Eric C. Orenstein
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Frédéric Maps
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Érica C. Becker
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Article dans une revue
hal-03482282
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Marine snow morphology illuminates the evolution of phytoplankton blooms and determines their subsequent vertical export
Emilia Trudnowska
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Mathieu Ardyna
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Andreas Rogge
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Jean Olivier Irisson
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Article dans une revue
hal-03230967
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Macroscale patterns of oceanic zooplankton composition and size structure
Manoela Brandão
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Fabio Benedetti
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Séverine Martini
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Yawouvi Dodji Soviadan
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Jean-Olivier Irisson
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Article dans une revue
hal-03318806
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Functional trait-based approaches as a common framework for aquatic ecologists
Severine Martini
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Floriane Larras
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Aurélien Boyé
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Emile Faure
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Nicole Aberle
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Article dans une revue
hal-02996072
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Concomitant changes in the Environment and small pelagic fish community of the Gulf of Lions
Guillaume Feuilloley
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Jean-Marc Fromentin
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Lars Stemmann
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Hervé Demarcq
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Claude Estournel
et al.
Article dans une revue
hal-02868174
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Taxonomic and size structures of zooplankton communities in the fjords along the Atlantic water passage to the Arctic
E. Trudnowska
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L. Stemmann
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K. Błachowiak-Samołyk
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S. Kwasniewski
Article dans une revue
insu-03661725
v1
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Marine DNA viral macro- and microdiversity from Pole to Pole
Ann Gregory
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Ahmed Zayed
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Nádia Conceição-Neto
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Ben Temperton
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Ben Bolduc
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Article dans une revue
hal-02387010
v1
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The Seasonal and Inter-Annual Fluctuations of Plankton Abundance and Community Structure in a North Atlantic Marine Protected Area
Fabio Benedetti
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Laëtitia Jalabert
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Marc Sourisseau
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Beatriz Becker
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Caroline Cailliau
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Article dans une revue
hal-02125435
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Are tropical coastal reefs sinks or sources of mesozooplankton? A case study in a Brazilian marine protected area
Gleice S. Santos
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Lars Stemmann
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Fabien Lombard
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Ralf Schwamborn
Article dans une revue
insu-03661728
v1
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Globally Consistent Quantitative Observations of Planktonic Ecosystems
Fabien Lombard
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Emmanuel Boss
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Anya M Waite
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Meike Vogt
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Julia Uitz
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Article dans une revue
hal-02325576
v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life
Federico Ibarbalz
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Nicolas Henry
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Manoela Brandão
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Severine Martini
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Greta Busseni
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Article dans une revue
hal-03094778
v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Luigi Caputi
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Quentin Carradec
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Damien Eveillard
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Amos Kirilovsky
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Eric Pelletier
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Article dans une revue
hal-02999805
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Prediction of unprecedented biological shifts in the global ocean
G. Beaugrand
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A. Conversi
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A. Atkinson
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J. Cloern
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S. Chiba
et al.
Article dans une revue
hal-02189417
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Into the bloom: Molecular response of pelagic tunicates to fluctuating food availability
Paolo Sordino
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Salvatore d'Aniello
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Eric Pelletier
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Patrick Wincker
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Valeria Nittoli
et al.
Article dans une revue
hal-03955981
v1
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Particulate matter flux interception in oceanic mesoscale eddies by the polychaete Poeobius sp.
Svenja Christiansen
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Henk-Jan Hoving
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Florian Schütte
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Helena Hauss
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Johannes Karstensen
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Article dans une revue
hal-01927160
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Yoann Seeleuthner
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Samuel Mondy
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Vincent Lombard
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Quentin Carradec
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Eric Pelletier
et al.
Article dans une revue
hal-01771839
v1
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Exploring Microdiversity in Novel Kordia sp (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes
Marta Royo-Llonch
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Isabel Ferrera
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Francisco M. Cornejo-Castillo
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Pablo Sánchez
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Guillem Salazar
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Article dans une revue
hal-03502952
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Biological and physical influences on marine snowfall at the equator
R. Kiko
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A. Biastoch
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P. Brandt
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S. Cravatte
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H. Hauss
et al.
Article dans une revue
hal-03502948
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New insights into global biogeography, population structure and natural selection from the genome of the epipelagic copepod Oithona
Mohammed-Amin Madoui
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Julie Poulain
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Kevin Sugier
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Marc Wessner
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Benjamin Noel
et al.
Article dans une revue
hal-01621969
v1
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Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition
Adriana A. Alberti
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Julie Poulain
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Stefan Engelen
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Karine Labadie
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Sarah Romac
et al.
Article dans une revue
hal-01771844
v1
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Biogeography and diversity of Collodaria (Radiolaria) in the global ocean
Tristan Biard
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Estelle Bigeard
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Stéphane Audic
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Julie Poulain
,
Andres Gutierrez-Rodriguez
et al.
Article dans une revue
hal-03502955
v1
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The wineglass effect shapes particle export to the deep ocean in mesoscale eddies
Anya M. Waite
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Lars Stemmann
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Lionel Guidi
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Paulo H. R. Calil
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Andrew Mc C. Hogg
et al.
Article dans une revue
hal-03502974
v1
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Plankton networks driving carbon export in the oligotrophic ocean
Lionel Guidi
,
Samuel Chaffron
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Lucie Bittner
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Damien Eveillard
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Abdelhalim Larhlimi
et al.
Article dans une revue
hal-01275276
v1
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High frequency mesozooplankton monitoring: Can imaging systems and automated sample analysis help us describe and interpret changes in zooplankton community composition and size structure — An example from a coastal site
Jean-Louis Jamet
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Jean Baptiste Romagnan
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Lama Aldamman
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Stéphane Gasparini
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Paul Nival
et al.
Article dans une revue
hal-01893632
v1
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Temporal Variability of Zooplankton (2000-2013) in the Levantine Sea: Significant Changes Associated to the 2005-2010 EMT-like Event?
Anthony Ouba
,
Marie Abboud-Abi Saab
,
Lars Stemmann
Article dans une revue
hal-01368224
v1
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In situ imaging reveals the biomass of giant protists in the global ocean
Tristan Biard
,
Lars Stemmann
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Marc Picheral
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Nicolas Mayot
,
Pieter Vandromme
et al.
Article dans une revue
hal-01324873
v1
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Proposition of indicators of anthropogenic pressure in the Bay of Toulon (Mediterranean Sea) based on zooplankton time-series
B Serranito
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Anais Aubert
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L Stemmann
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N Rossi
,
Jean-Louis Jamet
Article dans une revue
hal-01328957
v1
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A new look at ocean carbon remineralization for estimating deepwater sequestration
Lionel Guidi
,
Louis Legendre
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Gabriel Reygondeau
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Julia Uitz
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Lars Stemmann
et al.
Article dans une revue
hal-03502734
v1
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Comprehensive Model of Annual Plankton Succession Based on the Whole-Plankton Time Series Approach
Jean-Baptiste Romagnan
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Louis Legendre
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Lionel Guidi
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Jean-Louis Jamet
,
Dominique Jamet
et al.
Article dans une revue
hal-01225074
v1
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Synchronous marine pelagic regime shifts in the Northern Hemisphere
G. Beaugrand
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A. Conversi
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S. Chiba
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M. Edwards
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S. Fonda-Umani
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Article dans une revue
hal-03502742
v1
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Optical techniques for remote and in-situ characterization of particles pertinent to GEOTRACES
Emmanuel Boss
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Lionel Guidi
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Mary Jo Richardson
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Lars Stemmann
,
Wilford Gardner
et al.
Article dans une revue
hal-03502737
v1
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Structure and function of the global ocean microbiome
Shinichi Sunagawa
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Luis Pedro Coelho
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Samuel Chaffron
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Jens Roat Kultima
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Karine Labadie
et al.
Article dans une revue
hal-01233742
v1
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Open science resources for the discovery and analysis of Tara Oceans data
Stéphane Pesant
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Fabrice Not
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Marc Picheral
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Stefanie Kandels-Lewis
,
Noan Le Bescot
et al.
Article dans une revue
hal-01253984
v1
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Eukaryotic plankton diversity in the sunlit ocean
Noan Le Bescot
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Ian Probert
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Margaux Carmichael
,
Julie Poulain
,
Sarah Romac
et al.
Article dans une revue
hal-01253979
v1
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Pteropod time series from the North Western Mediterranean (1967-2003): impacts of pH and climate variability
E. L. Howes
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L. Stemmann
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C. Assailly
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J. -O. Irisson
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M. Dima
et al.
Article dans une revue
hal-03502730
v1
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Nitrogen Fuelling of the Pelagic Food Web of the Tropical Atlantic
Vera Sandel
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Rainer Kiko
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Peter Brandt
,
Marcus Dengler
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Lars Stemmann
et al.
Article dans une revue
hal-01308142
v1
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Determinants of community structure in the global plankton interactome
Gipsi Lima-Mendez
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Karoline Faust
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Nicolas Henry
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Johan Decelle
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Sébastien Colin
et al.
Article dans une revue
hal-01234200
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Rapid formation of large aggregates during the spring bloom of Kerguelen Island: observations and model comparisons
M.-P Jouandet
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George A Jackson
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F Carlotti
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M Picheral
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L Stemmann
et al.
Article dans une revue
hal-01308018
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Individual shrinking to enhance population survival: quantifying the reproductive and metabolic expenditures of a starving jellyfish, Pelagia noctiluca
Martin K. S. Lilley
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Amanda Elineau
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Martina Ferraris
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Alain Thiéry
,
Lars Stemmann
et al.
Article dans une revue
hal-03502757
v1
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Iron fertilization enhanced net community production but not downward particle flux during the Southern Ocean iron fertilization experiment LOHAFEX
Patrick Martin
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Michiel M. Rutgers van Der Loeff
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Nicolas Cassar
,
Pieter Vandromme
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Francesco d'Ovidio
et al.
Article dans une revue
hal-01445819
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Cross-shelf variability in the Iberian Peninsula Upwelling System: Impact of a mesoscale filament
Vincent Rossi
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Véronique Garçon
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Joëlle Tassel
,
Jean-Baptiste Romagnan
,
Lars Stemmann
et al.
Article dans une revue
hal-02296654
v1
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Ecosystem function and particle flux dynamics across the Mackenzie Shelf (Beaufort Sea, Arctic Ocean): an integrative analysis of spatial variability and biophysical forcings
A. Forest
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M. Babin
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L. Stemmann
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M. Picheral
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M. Sampei
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Article dans une revue
hal-03502645
v1
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Size distribution of particles and zooplankton across the shelf-basin system in southeast Beaufort Sea: combined results from an Underwater Vision Profiler and vertical net tows
A. Forest
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L. Stemmann
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M. Picheral
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L. Burdorf
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D. Robert
et al.
Article dans une revue
hal-03502681
v1
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Does eddy-eddy interaction control surface phytoplankton distribution and carbon export in the North Pacific Subtropical Gyre?
Lionel Guidi
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Paulo H. R. Calil
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Solange Duhamel
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Karin M. Bjoerkman
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Scott C. Doney
et al.
Article dans une revue
hal-03502664
v1
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Inter-annual fluctuations of zooplankton communities in the Bay of Villefranche-sur-mer from 1995 to 2005 (Northern Ligurian Sea, France)
P. Vandromme
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L. Stemmann
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L. Berline
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S. Gasparini
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L. Mousseau
et al.
Article dans une revue
hal-03502045
v1
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Zooplankton long-term changes in the NW Mediterranean Sea: Decadal periodicity forced by winter hydrographic conditions related to large-scale atmospheric changes?
Carmen Garcia-Comas
,
Lars Stemmann
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Frederic Ibanez
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Léo Berline
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Maria Grazia Mazzocchi
et al.
Article dans une revue
istex
hal-03502020
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Marine ecosystems’ responses to climatic and anthropogenic forcings in the Mediterranean
Cecile Guieu
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Xavier Durrieu de Madron
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Pascal Conan
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Frédéric Gazeau
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Claude Estournel
et al.
Article dans une revue
istex
hal-03452771
v1
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Optical imaging of mesopelagic particles indicates deep carbon flux beneath a natural iron-fertilized bloom in the Southern Ocean
Marie-Paule Jouandet
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Thomas W. Trull
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Lionel Guidi
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Marc Picheral
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Friederike Ebersbach
et al.
Article dans une revue
hal-03502030
v1
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Census and analysis of zooplankton metadata of the French coasts since 1955
Virginie Raybaud
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D. Heroin
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Thomas Raud
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Jean-Michel Brylinski
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L. Stemmann
et al.
Journal of Oceanography, 2011, 4, pp.11-37
Article dans une revue
hal-00759286
v1
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Digital zooplankton image analysis using the ZooScan integrated system
Stephane Gasparini
,
Lars Stemmann
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Jean-Baptiste Romagnan
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Alison Cawood
,
Stephane Pesant
et al.
Article dans une revue
hal-03502074
v1
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Experimental and modeling evidence of appendicularian-ciliate interactions
Fabien Lombard
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Damien Eloire
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Angélique Gobet
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Lars Stemmann
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John R. Dolan
et al.
Article dans une revue
hal-01893823
v1
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Impact of appendicularians on detritus and export fluxes: a model approach at DyFAMed site
L. Berline
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Lars Stemmann
,
Marcello Vichi
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Fabien Lombard
,
Gaby Gorsky
Article dans une revue
hal-00655066
v1
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The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton
Marc Picheral
,
Lionel Guidi
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Lars Stemmann
,
David M. Karl
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Ghizlaine Iddaoud
et al.
Article dans une revue
hal-03502058
v1
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Effects of phytoplankton community on production, size and export of large aggregates: A world-ocean analysis
Lionel Guidi
,
Lars Stemmann
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George A. Jackson
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Frederic Ibanez
,
Hervé Claustre
et al.
Article dans une revue
hal-03505004
v1
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Vertical distribution (0-1000 m) of macrozooplankton, estimated using the Underwater Video Profiler, in different hydrographic regimes along the northern portion of the Mid-Atlantic Ridge
L. Stemmann
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A. Hosia
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M. J. Youngbluth
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H. Soiland
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M. Picheral
et al.
Article dans une revue
istex
hal-03494359
v1
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Contrasting distribution of aggregates >100 µm in the upper kilometre of the South-Eastern Pacific
L. Guidi
,
G. Gorsky
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Hervé Claustre
,
M. Picheral
,
L. Stemmann
Biogeosciences Discussions, 2008, 5 (1), pp.871-901
Article dans une revue
hal-00330289
v1
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Distribution and fluxes of aggregates > 100 mu m in the upper kilometer of the South-Eastern Pacific
J. C. Miquel
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M. Picheral
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L. Stemmann
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Lionel Guidi
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G. Gorsky
et al.
Article dans une revue
hal-03494358
v1
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Global zoogeography of fragile macrozooplankton in the upper 100-1000 m inferred from the underwater video profiler
Lars Stemmann
,
Marsh Youngbluth
,
Kevin Robert
,
Aino Hosia
,
Marc Picheral
et al.
Article dans une revue
hal-03494350
v1
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Volume distribution for particles between 3.5 to 2000 µm in the upper 200 m region of the South Pacific Gyre
L. Stemmann
,
D. Eloire
,
A. Sciandra
,
G. A. Jackson
,
L. Guidi
et al.
Article dans une revue
hal-00330349
v2
|
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Vertical distribution and relative abundance of gelatinous zooplankton, in situ observations near the Mid-Atlantic Ridge
M. Youngbluth
,
T. Sornes
,
A. Hosia
,
L. Stemmann
Article dans une revue
istex
hal-03494361
v1
|
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Distribution of net-collected planktonic cnidarians along the northern Mid-Atlantic Ridge and their associations with the main water masses
A. Hosia
,
L. Stemmann
,
M. Youngbluth
Article dans une revue
istex
hal-03494360
v1
|
|
Relationship between particle size distribution and flux in the mesopelagic zone
Lionel Guidi
,
George A. Jackson
,
Lars Stemmann
,
Juan Carlos Miquel
,
Marc Picheral
et al.
Article dans une revue
istex
hal-03494337
v1
|
|
Effects of frontal processes on marine aggregate dynamics and fluxes: An interannual study in a permanent geostrophic front (NW Mediterranean)
Lars Stemmann
,
Louis Prieur
,
Louis Legendre
,
Isabelle Taupier-Letage
,
Marc Picheral
et al.
Article dans une revue
istex
hal-03494353
v1
|
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Vertical distribution of aggregates (> 110 mu m) and mesoscale activity in the northeastern Atlantic: Effects on the deep vertical export of surface carbon
Lionel Guidi
,
Lars Stemmann
,
Louis Legendre
,
Marc Picheral
,
Louis Prieur
et al.
Article dans une revue
hal-03504960
v1
|
|
A vertical model of particle size distributions and fluxes in the midwater column that includes biological and physical processes - Part II: application to a three year survey in the NW Mediterranean Sea
L Stemmann
,
Ga Jackson
,
G Gorsky
Article dans une revue
istex
hal-03506669
v1
|
|
A vertical model of particle size distributions and fluxes in the midwater column that includes biological and physical processes - Part I: model formulation
L Stemmann
,
Ga Jackson
,
D Ianson
Article dans une revue
istex
hal-03506668
v1
|
|
Marine snow latitudinal distribution in the equatorial Pacific along 180 degrees
G Gorsky
,
R Le Borgne
,
M Picheral
,
L Stemmann
Article dans une revue
istex
hal-03482948
v1
|
|
Pulsed remineralisation in the northwestern Mediterranean Sea: a hypothesis
Michel Denis
,
Valérie Martin
,
André Momzikoff
,
Geneviève Gondry
,
Lars Stemmann
et al.
Article dans une revue
istex
hal-00770806
v1
|
|
Four-year study of large-particle vertical distribution (0-1000 m) in the NW Mediterranean in relation to hydrology, phytoplankton, and vertical flux
L Stemmann
,
G Gorsky
,
Jc Marty
,
M Picheral
,
Jc Miquel
Article dans une revue
istex
hal-03483025
v1
|
|
Large particulate matter in the Western Mediterranean I. LPM distribution related to mesoscale hydrodynamics
G Gorsky
,
L Prieur
,
I. Taupier-Letage
,
L Stemmann
,
M Picheral
Article dans une revue
hal-03482989
v1
|
|
Diel variation in the vertical distribution of particulate matter (> 0.15 mm) in the NW Mediterranean Sea investigated with the Underwater Video Profiler
L Stemmann
,
M Picheral
,
G Gorsky
Article dans une revue
istex
hal-03483088
v1
|
|
Use of the Underwater Video Profiler for the study of aggregate dynamics in the North Mediterranean
G Gorsky
,
M Picheral
,
L Stemmann
Article dans une revue
istex
hal-03483093
v1
|