|
|
Phytoplankton With Flexible Pigment Content Disadvantaged by Projected Future Decrease in Variability of the Ocean Light Spectrum
Francesco Mattei
,
Anna E Hickman
,
Julia Uitz
,
Vincenzo Vellucci
,
Laurence Garczarek
et al.
Article dans une revue
hal-05451893
v1
|
|
|
Competition for light color between marine <i>Synechococcus</i> strains with fixed and variable pigmentation
Louison Dufour
,
Laurence Garczarek
,
Francesco Mattei
,
Bastian Gouriou
,
Julia Clairet
et al.
Article dans une revue
hal-05218257
v1
|
|
|
First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples
Christina Pavloudi
,
Ioulia Santi
,
Iñigo Azua
,
Zuriñe Baña
,
Mauro Bastianini
et al.
Article dans une revue
(data paper)
cea-05046943
v1
|
|
|
Chromatic acclimation shapes phytoplankton biogeography
Francesco Mattei
,
Anna Hickman
,
Julia Uitz
,
Louison Dufour
,
Vincenzo Vellucci
et al.
Article dans une revue
hal-04962714
v1
|
|
|
Light color regulation of photosynthetic antennae biogenesis in marine phytoplankton
David M. Kehoe
,
Avijit Biswas
,
Bo Chen
,
Louison Dufour
,
Théophile Grébert
et al.
Article dans une revue
hal-04725332
v1
|
|
|
Differential acclimation kinetics of the two forms of type IV chromatic acclimaters occurring in marine Synechococcus cyanobacteria
Louison Dufour
,
Laurence Garczarek
,
Bastian Gouriou
,
Julia Clairet
,
Morgane Ratin
et al.
Article dans une revue
hal-04467770
v2
|
|
|
Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies
Hugo Doré
,
Ulysse Guyet
,
Jade Leconte
,
Gregory Farrant
,
Benjamin Alric
et al.
Article dans une revue
hal-04238382
v2
|
|
|
Nested PCR Approach for petB Gene Metabarcoding of Marine Synechococcus Populations
Denise Rui Ying Ong
,
Andrés Gutiérrez-Rodríguez
,
Laurence Garczarek
,
Dominique Marie
,
Adriana Lopes dos Santos
Article dans une revue
hal-04245006
v1
|
|
|
Transcriptional Mechanisms of Thermal Acclimation in Prochlorococcus
Laura Alonso-Sáez
,
Antonio Palacio
,
Ana Cabello
,
Semidán Robaina-Estévez
,
José González
et al.
Article dans une revue
hal-04245000
v1
|
|
|
Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean
Sophie Bonnet
,
Mar Benavides
,
Frédéric a C Le Moigne
,
Mercedes Camps
,
Antoine Torremocha
et al.
Article dans une revue
hal-03840301
v1
|
|
|
Global Phylogeography of Marine Synechococcus in Coastal Areas Reveals Strong Community Shifts
Hugo Doré
,
Jade Leconte
,
Ulysse Guyet
,
Solène Breton
,
Gregory Farrant
et al.
Article dans une revue
hal-03971550
v2
|
|
|
Comparative Thermophysiology of Marine Synechococcus CRD1 Strains Isolated From Different Thermal Niches in Iron-Depleted Areas
Mathilde Ferrieux
,
Louison Dufour
,
Hugo Doré
,
Morgane Ratin
,
Audrey Guéneuguès
et al.
Article dans une revue
hal-03768045
v1
|
|
|
Multiple photolyases protect the marine cyanobacterium Synechococcus from ultraviolet radiation
Allissa Haney
,
Joseph Sanfilippo
,
Laurence Garczarek
,
Frédéric Partensky
,
David Kehoe
Article dans une revue
hal-03778941
v1
|
|
|
Diversity and evolution of pigment types in marine $Synechococcus$ cyanobacteria
Théophile Grébert
,
Laurence Garczarek
,
Vincent Daubin
,
Florian Humily
,
Dominique Marie
et al.
Article dans une revue
hal-03641745
v1
|
|
|
MpeV is a lyase isomerase that ligates a doubly linked phycourobilin on the β-subunit of phycoerythrin I and II in marine Synechococcus
Lyndsay Carrigee
,
Jacob Frick
,
Jonathan Karty
,
Laurence Garczarek
,
Frédéric Partensky
et al.
Article dans une revue
hal-03971277
v2
|
|
|
Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes
Laurence Garczarek
,
Ulysse Guyet
,
Hugo Doré
,
Gregory Farrant
,
Mark Hoebeke
et al.
Article dans une revue
hal-02988562
v1
|
|
|
Vibrational modes of water predict spectral niches for photosynthesis in lakes and oceans
Tadzio Holtrop
,
Jef Huisman
,
Maayke Stomp
,
Levi Biersteker
,
Jeroen Aerts
et al.
Article dans une revue
hal-02999397
v1
|
|
|
Molecular bases of an alternative dual-enzyme system for light color acclimation of marine $Synechococcus$ cyanobacteria
Théophile Grébert
,
Adam A Nguyen
,
Suman Pokhrel
,
Kes Lynn
,
Morgane Ratin
et al.
Article dans une revue
hal-03153666
v1
|
|
|
Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803
Ulysse Guyet
,
Ngoc Thanh Nguyen
,
Hugo Doré
,
Julie Haguait
,
Justine Pittera
et al.
Article dans une revue
hal-02929424
v1
|
|
|
Unveiling membrane thermoregulation strategies in marine picocyanobacteria
Solène Breton
,
Juliette Jouhet
,
Ulysse Guyet
,
Valérie Gros
,
Justine Pittera
et al.
Article dans une revue
hal-02323286
v1
|
|
|
Changes in Population Age-Structure Obscure the Temperature-Size Rule in Marine Cyanobacteria
Antonio Palacio
,
Ana María Cabello
,
Francisca García
,
Abbrar Labban
,
Xosé Anxelu G. Morán
et al.
Article dans une revue
hal-03001178
v1
|
|
|
Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria
Hugo Doré
,
Gregory Farrant
,
Ulysse Guyet
,
Julie Haguait
,
Florian Humily
et al.
Article dans une revue
hal-02938656
v1
|
|
|
Interplay between differentially expressed enzymes contributes to light color acclimation in marine Synechococcus
Joseph E Sanfilippo
,
Adam A Nguyen
,
Laurence Garczarek
,
Jonathan A Karty
,
Suman Pokhrel
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (13), pp.6457-6462. ⟨10.1073/pnas.1810491116⟩
Article dans une revue
hal-02322866
v1
|
|
|
Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Luigi Caputi
,
Quentin Carradec
,
Damien Eveillard
,
Amos Kirilovsky
,
Eric Pelletier
et al.
Article dans une revue
hal-02999805
v1
|
|
|
Chromatic Acclimation in Cyanobacteria: A Diverse and Widespread Process for Optimizing Photosynthesis
Joseph E Sanfilippo
,
Laurence Garczarek
,
Frédéric Partensky
,
David M Kehoe
Article dans une revue
hal-02322722
v1
|
|
|
Thermoacclimation and genome adaptation of the membrane lipidome in marine Synechococcus
Justine Pittera
,
Juliette Jouhet
,
Solène Breton
,
Laurence Garczarek
,
Frédéric Partensky
et al.
Article dans une revue
hal-01699416
v1
|
|
|
A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle
Frédéric Partensky
,
Christophe Six
,
Morgane Ratin
,
Laurence Garczarek
,
Daniel Vaulot
et al.
Article dans une revue
hal-01805749
v1
|
|
|
Relative stability of ploidy in a marine Synechococcus across various growth conditions
Blanca Perez-Sepulveda
,
Frances D Pitt
,
An N'Guyen
,
Morgane Ratin
,
Laurence Garczarek
et al.
Article dans une revue
hal-02086624
v1
|
|
|
Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria
Théophile Grébert
,
Hugo Doré
,
Frédéric Partensky
,
Gregory Farrant
,
Emmanuel Boss
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (9), pp.E2010-E2019. ⟨10.1073/pnas.1717069115⟩
Article dans une revue
hal-01772758
v1
|
|
|
Comparison of photosynthetic performances of marine picocyanobacteria with different configurations of the oxygen-evolving complex
Frédéric Partensky
,
Daniella Mella-Flores
,
Christophe Six
,
Laurence Garczarek
,
Mirjam Czjzek
et al.
Article dans une revue
hal-01823168
v1
|
|
|
Adaptation to Blue Light in Marine Synechococcus Requires MpeU, an Enzyme with Similarity to Phycoerythrobilin Lyase Isomerases
Rania M. Mahmoud
,
Joseph E. Sanfilippo
,
Adam A. Nguyen
,
Johann A. Strnat
,
Frédéric Partensky
et al.
Article dans une revue
hal-01490531
v1
|
|
|
Synechococcus in the Atlantic Gateway to the Arctic Ocean
Maria Paulsen
,
Hugo Doré
,
Laurence Garczarek
,
Lena Seuthe
,
Oliver Müller
et al.
Article dans une revue
hal-03798243
v1
|
|
|
Self-regulating genomic island encoding tandem regulators confers chromatic acclimation to marine Synechococcus
Joseph E. Sanfilippo
,
Adam A. Nguyen
,
Jonathan A. Karty
,
Animesh Shukla
,
Wendy M. Schluchter
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (21), pp.6077-6082. ⟨10.1073/pnas.1600625113⟩
Article dans une revue
hal-01320666
v1
|
|
|
Phylogeography and pigment type diversity of Synechococcus cyanobacteria in surface waters of the northwestern Pacific Ocean
Xiaomin Xia
,
Frédéric Partensky
,
Laurence Garczarek
,
Koji Suzuki
,
Cui Guo
et al.
Article dans une revue
hal-01377154
v1
|
|
|
Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria
Gregory K. Farrant
,
Hugo Doré
,
Francisco M. Cornejo-Castillo
,
Frédéric Partensky
,
Morgane Ratin
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (24), pp.E3365-E3374. ⟨10.1073/pnas.1524865113⟩
Article dans une revue
hal-01331214
v1
|
|
|
WiseScaffolder: an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data
Gregory K. Farrant
,
Mark Hoebeke
,
Frédéric Partensky
,
Gwendoline Andres
,
Erwan Corre
et al.
Article dans une revue
hal-01193001
v1
|
|
|
Environmental characteristics of Agulhas rings affect interocean plankton transport
Emilie Villar
,
Gregory Farrant
,
Michael Follows
,
Laurence Garczarek
,
Sabrina Speich
et al.
Article dans une revue
hal-01893637
v1
|
|
|
Connecting thermal physiology and latitudinal niche partitioning in marine Synechococcus
Justine Pittera
,
Florian Humily
,
Maxine Thorel
,
Daphné Grulois
,
Laurence Garczarek
et al.
Article dans une revue
hal-01101004
v1
|
|
|
Development of a targeted metagenomic approach to study a genomic region involved in light harvesting in marine Synechococcus
Florian Humily
,
Gregory K. Farrant
,
Dominique Marie
,
Frédéric Partensky
,
Sophie Mazard
et al.
Article dans une revue
hal-01100993
v1
|
|
|
A Gene Island with Two Possible Configurations Is Involved in Chromatic Acclimation in Marine Synechococcus
Florian Humily
,
Frédéric Partensky
,
Christophe Six
,
Gregory K. Farrant
,
Morgane Ratin
et al.
Article dans une revue
hal-01218505
v1
|
|
|
CyanoLyase: a database of phycobilin lyase sequences, motifs and functions
Anthony Bretaudeau
,
François Coste
,
Florian Humily
,
Laurence Garczarek
,
Gildas Le Corguillé
et al.
Article dans une revue
hal-01094087
v1
|
|
|
Phycoerythrin-specific bilin lyase-isomerase controls blue-green chromatic acclimation in marine Synechococcus.
Animesh Shukla
,
Avijit Biswas
,
Nicolas Blot
,
Frédéric Partensky
,
Jonathan A Karty
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (49), pp.20136-41. ⟨10.1073/pnas.1211777109⟩
Article dans une revue
hal-01071892
v1
|
|
|
Prochlorococcus and Synechococcus have Evolved Different Adaptive Mechanisms to Cope with Light and UV Stress.
Daniella Mella-Flores
,
Christophe Six
,
Morgane Ratin
,
Frédéric Partensky
,
Christophe Boutte
et al.
Article dans une revue
hal-00815833
v1
|
|
|
Diversity of cultivated and metabolically active aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea
Christian Jeanthon
,
Dominique Boeuf
,
Océane Dahan
,
Florence Le Gall
,
Laurence Garczarek
et al.
Article dans une revue
hal-01218510
v1
|
|
|
Is the distribution of Prochlorococcus and Synechococcus ecotypes in the Mediterranean Sea affected by global warming?
Daniella Mella-Flores
,
S. Mazard
,
Florian Humily
,
Frédéric Partensky
,
Frédéric Mahé
et al.
Article dans une revue
hal-01218507
v1
|
|
|
Light history influences the response of the marine cyanobacterium Synechococcus sp. WH7803 to oxidative stress.
Nicolas Blot
,
Daniella Mella-Flores
,
Christophe Six
,
Gildas Le Corguillé
,
Christophe Boutte
et al.
Article dans une revue
hal-00825364
v1
|
|
|
Ultraviolet stress delays chromosome replication in light/dark synchronized cells of the marine cyanobacterium Prochlorococcus marinus PCC9511.
Christian Kolowrat
,
Frédéric Partensky
,
Daniella Mella-Flores
,
Gildas Le Corguillé
,
Christophe Boutte
et al.
Article dans une revue
hal-00529495
v1
|
|
|
Prochlorococcus: Advantages and Limits of Minimalism
Frédéric Partensky
,
Laurence Garczarek
Article dans une revue
hal-01218511
v1
|
|
|
Ecological genomics of marine Picocyanobacteria.
David J. Scanlan
,
Martin Ostrowski
,
Sophie Mazard
,
Alexis Dufresne
,
Laurence Garczarek
et al.
Article dans une revue
hal-00406529
v1
|
|
|
Phycourobilin in trichromatic phycocyanin from oceanic cyanobacteria is formed post-translationally by a phycoerythrobilin lyase-isomerase.
Nicolas Blot
,
Xian-Jun Wu
,
Jean-Claude Thomas
,
Juan Zhang
,
Laurence Garczarek
et al.
Article dans une revue
hal-00529452
v1
|
|
|
Diel rhythmicity in amino acid uptake by Prochlorococcus.
Isabelle Mary
,
Laurence Garczarek
,
Glen A Tarran
,
Christian Kolowrat
,
Matthew J Terry
et al.
Article dans une revue
istex
hal-00528824
v1
|
|
|
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria.
Alexis Dufresne
,
Martin Ostrowski
,
David J. Scanlan
,
Laurence Garczarek
,
Sophie Mazard
et al.
Article dans une revue
hal-00338634
v1
|
|
|
Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes
Katrin Zwirglmaier
,
Ludwig Jardillier
,
Martin Ostrowski
,
Sophie Mazard
,
Laurence Garczarek
et al.
Article dans une revue
istex
hal-04262972
v1
|
|
|
Function and evolution of the psbA gene family in marine Synechococcus: Synechococcus sp. WH7803 as a case study
Laurence Garczarek
,
Alexis Dufresne
,
Nicolas Blot
,
Amanda M. Cockshutt
,
Anne Peyrat
et al.
Article dans une revue
hal-00338642
v1
|
|
|
Nutrient limitation of primary productivity in the Southeast Pacific (BIOSOPE cruise)
Sophie Bonnet
,
C. Guieu
,
F. Bruyant
,
O. Prášil
,
France van Wambeke
et al.
Article dans une revue
hal-00330343
v1
|
|
|
Picoplankton diversity in the South-East Pacific Ocean from cultures
F. Le Gall
,
F. Rigaut-Jalabert
,
D. Marie
,
L. Garczarek
,
M. Viprey
et al.
Biogeosciences, 2008, 5 (1), pp.203-214
Article dans une revue
hal-00330342
v1
|
|
|
High vertical and low horizontal diversity of Prochlorococcus ecotypes in the Mediterranean sea in summers.
Laurence Garczarek
,
Alexis Dufresne
,
Sylvie Rousvoal
,
Nyree J. West
,
Sophie Mazard
et al.
Article dans une revue
hal-00476860
v1
|
|
|
Picoplankton diversity in the South-East Pacific Ocean from cultures
F. Le Gall
,
F. Rigaut-Jalabert
,
D. Marie
,
L. Garczarek
,
M. Viprey
et al.
Biogeosciences Discussions, 2007, 4 (4), pp.2699-2732
Article dans une revue
hal-00330257
v1
|
|
|
Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study
Christophe Six
,
Jean-Claude Thomas
,
Laurence Garczarek
,
Martin Ostrowski
,
Alexis Dufresne
et al.
Article dans une revue
hal-00338622
v1
|
|
|
Diel variations in the photosynthetic parameters of Prochlorococcus strain PCC 9511: Combined effects of light and cell cycle
F Partensky
,
F Bruyant
,
M Babin
,
B Genty
,
O Prasil
et al.
Article dans une revue
hal-03494217
v1
|
|
|
Differential expression of antenna and core genes in Prochlorococcus PCC 9511 (Oxyphotobacteria) grown under a modulated light-dark cycle
L Garczarek
,
F Partensky
,
H Irlbacher
,
J Holtzendorff
,
M Babin
et al.
Article dans une revue
istex
hal-03506693
v1
|
|
|
Diel expression of cell cycle-related genes in synchronized cultures of Prochlorococcus sp. strain PCC 9511.
J. Holtzendorff
,
Frédéric Partensky
,
Stéphanie Jacquet
,
Flavienne Bruyant
,
Dominique Marie
et al.
Article dans une revue
hal-00529713
v1
|
|
|
Differential expression of antenna and core genes in Prochlorococcus PCC 9511 (Oxyphotobacteria) grown under a modulated light-dark cycle.
Laurence Garczarek
,
Frédéric Partensky
,
H. Irlbacher
,
J. Holtzendorff
,
M. Babin
et al.
Environmental Microbiology, 2001, 3 (3), pp.168-75
Article dans une revue
hal-00529712
v1
|