Laurence GIRBAL

Documents

Publications

Synergistic and individual effects of RNase E, II, and R in the regulation of Escherichia coli growth and metabolism

Marvin Ramos-Hue , Marjorie Audonnet , Maïssanne Dahmani , Mathilde Burck , Muriel Cocaign-Bousquet et al.

Applied and Environmental Microbiology, In press, ⟨10.1128/aem.00090-26⟩

Article dans une revue hal-05699612v1

Systems-level analysis predicts no autotrophy-linked protein-RNA interactions in Clostridium autoethanogenum

Angela Re , Gianfranco Michele Maria Politano , Kristina Reinmets , Alfredo Benso , Laurence Girbal et al.

Nature Communications, In press, ⟨10.1038/s41467-026-75309-w⟩

Article dans une revue hal-05699594v1

RNA stability is regulated by both RNA polyadenylation and ATP levels, linking RNA and energy metabolisms in Escherichia coli

Charlotte Roux , Marvin Ramos-Hue , Marjorie Audonnet , Marie-Pierre Duviau , Sébastien Nouaille et al.

mBio, 2025, 16 (1), ⟨10.1128/mbio.02680-24⟩

Article dans une revue hal-04777074v1

rRNA loss induced by rifampicin addition in Escherichia coli reflects extraction artifacts rather than in vivo degradation

Mathilde Burck , Sébastien Nouaille , Agamemnon J Carpousis , Muriel Cocaign-Bousquet , Laurence Girbal

Scientific Reports, 2025, 15 (1), pp.15:30833. ⟨10.1038/s41598-025-14966-1⟩

Article dans une revue hal-05218746v1

Attachment of the RNA degradosome to the bacterial inner cytoplasmic membrane prevents wasteful degradation of rRNA in ribosome assembly intermediates

Lydia Hadjeras , Marie Bouvier , Isabelle Canal , Leonora Poljak , Quentin Morin-Ogier et al.

PLoS Biology, 2023, 21 (1), pp.e3001942. ⟨10.1371/journal.pbio.3001942⟩

Article dans une revue hal-04018390v2

When translation elongation is impaired, the mRNA is uniformly destabilized by the RNA degradosome, while the concentration of mRNA is altered along the molecule

Marie-Pierre Duviau , Fan Chen , Anthony Emile , Muriel Cocaign-Bousquet , Laurence Girbal et al.

Nucleic Acids Research, 2023, ⟨10.1093/nar/gkad104⟩

Article dans une revue hal-04012706v1

Molecular characterization of the missing electron pathways for butanol synthesis in Clostridium acetobutylicum

Céline Foulquier , Antoine Rivière , Mathieu Heulot , Suzanna dos Reis , Caroline Perdu et al.

Nature Communications, 2022, 13, ⟨10.1038/s41467-022-32269-1⟩

Article dans une revue hal-03811719v1

Synergistic regulation of transcription and translation in Escherichia coli revealed by co-directional increases in mRNA concentration and translation efficiency

Huong Le Nguyen , Marie-Pierre Duviau , Sandrine Laguerre , Sébastien Nouaille , Muriel Cocaign-Bousquet et al.

Microbiology Spectrum, 2022, 10 (1), pp.e02041-21. ⟨10.1128/spectrum.02041-21⟩

Article dans une revue hal-03546610v2

The essential role of mRNA degradation in understanding and engineering E. coli metabolism

Charlotte Roux , Thibault Etienne , Eliane Hajnsdorf , Delphine Ropers , Agamemnon J. Carpousis et al.

Biotechnology Advances, 2022, 54, pp.107805. ⟨10.1016/j.biotechadv.2021.107805⟩

Article dans une revue hal-03325744v1

5’UTR sequences influence protein levels in Escherichia coli by regulating translation initiation and mRNA stability

Fan Chen , Muriel Cocaign-Bousquet , Laurence Girbal , Sébastien Nouaille

Frontiers in Microbiology, 2022, 13, pp.1088941. ⟨10.3389/fmicb.2022.1088941⟩

Article dans une revue hal-04012701v1

Genomewide Stabilization of mRNA during a "Feast-to- Famine" Growth Transition in Escherichia coli Downloaded from

Manon Morin , Brice Enjalbert , Delphine Ropers , Laurence Girbal , Muriel Cocaign-Bousquet

MSphere, 2020, 5 (3), ⟨10.1128/mSphere.00276-20⟩

Article dans une revue hal-02967494v1

Detachment of the RNA degradosome from the inner membrane of Escherichia coli results in a global slowdown of mRNA degradation, proteolysis of RNase E and increased turnover of ribosome-free transcripts

Lydia Hadjeras , Leonora Poljak , Marie Bouvier , Quentin Morin-Ogier , Isabelle Canal et al.

Molecular Microbiology, 2019, 111 (6), pp.1715-1731. ⟨10.1111/mmi.14248⟩

Article dans une revue hal-02317164v1

Multiplexing polysome profiling experiments to study translation in Escherichia coli

Huong Le Nguyen , Marie-Pierre Duviau , Muriel Cocaign-Bousquet , Sébastien Nouaille , Laurence Girbal

PLoS ONE, 2019, 14 (2), pp.1-16. ⟨10.1371/journal.pone.0212297⟩

Article dans une revue hal-02177353v1

PNPase is involved in the coordination of mRNA degradation and expression in stationary phase cells of Escherichia coli

Clémentine Dressaire , Vânia Pobre , Sandrine Laguerre , Laurence Girbal , Cecilia Maria Arraiano et al.

BMC Genomics, 2018, 19 (1), 13 p. ⟨10.1186/s12864-018-5259-8⟩

Article dans une revue hal-01954725v1

Roles of the F-domain in [FeFe] hydrogenase

Charles Gauquelin , Carole Baffert , Pierre Richaud , Emma Kamionka , Emilien Etienne et al.

Biochimica biophysica acta (BBA) - Bioenergetics, 2018, 1859 (2), pp.69-77. ⟨10.1016/j.bbabio.2017.08.010⟩

Article dans une revue cea-01950818v1

The stability of an mRNA is influenced by its concentration: a potential physical mechanism to regulate gene expression

Sébastien Nouaille , Sophie Mondeil , Anne-Laure Finoux , Claire Moulis , Laurence Girbal et al.

Nucleic Acids Research, 2017, 45 (20), pp.11711 - 11724. ⟨10.1093/nar/gkx781⟩

Article dans une revue hal-01882991v1

The Csr system regulates genome-wide mRNA stability and transcription and thus gene expression in Escherichia coli

Thomas Esquerre , Marie Bouvier , Catherine Turlan , Agamemnon Carpousis , Laurence Girbal et al.

Scientific Reports, 2016, 6 (1), ⟨10.1038/srep25057⟩

Article dans une revue hal-01882985v1

Genome-wide investigation of mRNA lifetime determinants in Escherichia coli cells cultured at different growth rates

Thomas Esquerre , Annick Moisan , Helene Chiapello , Liisa Arike , Raivo Vilu et al.

BMC Genomics, 2015, 16 (1), ⟨10.1186/s12864-015-1482-8⟩

Article dans une revue hal-01269038v1

Escherichia coli under Ionic Silver Stress: An Integrative Approach to Explore Transcriptional, Physiological and Biochemical Responses

Claire Saulou-Berion , Ignacio González , Brice Enjalbert , Jean-Nicolas Audinot , Isabelle Fourquaux et al.

PLoS ONE, 2015, 12 (12), pp.e0145748. ⟨10.1371/journal.pone.0145748⟩

Article dans une revue hal-01510596v1

Dual role of transcription and transcript stability in the regulation of gene expression in Escherichia coli cells cultured on glucose at different growth rates

Thomas Esquerre , Sandrine Laguerre , Catherine Turlan , Agamemnon Carpousis , Laurence Girbal et al.

Nucleic Acids Research, 2014, 42 (4), pp.2460-2472. ⟨10.1093/nar/gkt1150⟩

Article dans une revue hal-02129879v1

The significance of translation regulation in the stress response

Flora Picard , Pascal Loubière , Laurence Girbal , Muriel Bousquet

BMC Genomics, 2013, 14, ⟨10.1186/1471-2164-14-588⟩

Article dans une revue hal-01268301v1

Synchrotron FTIR microspectroscopy of Escherichia coli at single-cell scale under silver-induced stress conditions

Claire Saulou-Berion , Frédéric Jamme , Laurence Girbal , Claude Maranges , Isabelle Fourquaux et al.

Analytical and Bioanalytical Chemistry, 2013, 405 (8), pp.2685-2697. ⟨10.1007/s00216-013-6725-4⟩

Article dans une revue istex hal-01562705v1

A Genome-scale integration and analysis of Lactococcus lactis translation data

Julien Racle , Flora Picard , Laurence Girbal , Muriel Bousquet , Vassily Hatzimanikatis

PLoS Computational Biology, 2013, 9 (10), ⟨10.1371/journal.pcbi.1003240⟩

Article dans une revue hal-02651947v1

Role of mRNA stability during bacterial adaptation

Clémentine Dressaire , Flora Picard , Emma Redon , Pascal Loubière , Isabelle Queinnec et al.

PLoS ONE, 2013, 8 (3), pp.e59059. ⟨10.1371/journal.pone.0059059⟩

Article dans une revue hal-01268143v1

Bacterial translational regulations: high diversity between all mRNAs and major role in gene expression

Flora Picard , Hélène Milhem , Pascal Loubière , Béatrice Laurent , Muriel Bousquet et al.

BMC Genomics, 2012, 13, ⟨10.1186/1471-2164-13-528⟩

Article dans une revue hal-01268281v1

Dynamic Analysis of the Lactococcus lactis Transcriptome in Cheeses Made from Milk Concentrated by Ultrafiltration Reveals Multiple Strategies of Adaptation to Stresses

Marina Cretenet , Valérie Laroute , Vincent Ulvé , Sophie Jeanson , Sébastien Nouaille et al.

Applied and Environmental Microbiology, 2011, 77 (1), pp.247-257. ⟨10.1128/AEM.01174-10⟩

Article dans une revue hal-01454152v1

Assessment of the Diversity of Dairy Lactococcus lactis subsp lactis Isolates by an Integrated Approach Combining Phenotypic, Genomic, and Transcriptomic Analyses

Puntip Tan a Ram , Tamara Cardoso , Marie-Line Daveran-Mingot , Sunthorn Kanchanatawee , Pascal Loubière et al.

Applied and Environmental Microbiology, 2011, 77 (3), pp.739 - 748. ⟨10.1128/AEM.01657-10⟩

Article dans une revue hal-02652964v1

“Hydrogen-activating enzymes: activity does not correlate with oxygen sensitivity”

C. Baffert , M. Demuez , L. Cournac , B. Burlat , B. Guigliarelli et al.

Angewandte Chemie International Edition, 2008, 47, pp.2052

Article dans une revue hal-00336018v1

New hypotheses for hydrogenase implication in the corrosion of mild steel

Maha Mehanna , Régine Basséguy , Marie-Line Délia-Dupuy , Laurence Girbal , Marie Demuez et al.

Electrochimica Acta, 2008, vol. 54 n° 1., 140-147 available on : http://oatao.univ-toulouse.fr/1115/2/Mehanna_1115.pdf. ⟨10.1016/j.electacta.2008.02.101⟩

Article dans une revue hal-00475993v1

Regulation of carbon and electron flow in Clostridium acetobutylicum grown in chemostat culture at neutral pH on mixtures of glucose and glycerol

I. Vasconcelos , Laurence Girbal , Philippe Soucaille

Journal of Bacteriology, 1994, 176 (5), pp.1443-1450

Article dans une revue hal-02713047v1

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