Marie-Christine Carpentier

Publications

Article dans une revue (28)

Domain architecture of plant eukaryotic translation initiation factor 3 subunit E governs interaction with translational &lt;i&gt;cis&lt;/i&gt; -elements to regulatepollen tube growth Vinod Kumar,Rémy Merret,Marie C Carpentier,David Honys,Said Hafidh The Plant cell, 2026, 38, ⟨10.1093/plcell/koag005⟩ Article dans une revue hal-05516327v1
Regulation of co-translational mRNA decay by PAP and DXO1 in Arabidopsis Marie-Christine Carpentier,Anne-Elodie Receveur,Adrien Cadoudal,Rémy Merret BMC Plant Biology, 2025, 25 (1), pp.223. ⟨10.1186/s12870-025-06195-5⟩ Article dans une revue hal-04953592v1
Multi-transcriptomics identifies targets of the endoribonuclease DNE1 and highlights its coordination with decapping Aude Pouclet,David Pflieger,Rémy Merret,Marie-Christine Carpentier,Marlene Schiaffiniet al. The Plant cell, 2024, 36 (9), pp.3674-3688. ⟨10.1093/plcell/koae175⟩ Article dans une revue hal-04614989v1
Genome-wide analysis of mRNA decay in Arabidopsis shoot and root reveals the importance of co-translational mRNA decay in the general mRNA turnover Marie-Christine Carpentier,Anne-Elodie Receveur,Alexandre Boubegtitene,Adrien Cadoudal,Cécile Bousquet-Antonelliet al. Nucleic Acids Research, 2024, ⟨10.1093/nar/gkae363⟩ Article dans une revue hal-04599495v1
The unique dual targeting of AGO1 by two types of PRMT enzymes promotes phasiRNA loading in Arabidopsis thaliana Clément Barre-Villeneuve,Michèle Laudié,Marie-Christine Carpentier,Lauriane Kuhn,Thierry Lagrangeet al. Nucleic Acids Research, 2024, ⟨10.1093/nar/gkae045⟩ Article dans une revue hal-04484170v1
Plant response to intermittent heat stress involves modulation of mRNA translation efficiency Arnaud Dannfald,Marie-Christine Carpentier,Rémy Merret,Jean-Jacques Favory,Jean-Marc Deragon Plant Physiology, 2024, 197 (2), pp.kiae648. ⟨10.1093/plphys/kiae648⟩ Article dans une revue hal-04874246v1
Cell-type-specific control of secondary cell wall formation by Musashi-type translational regulators in Arabidopsis Alicia Kairouani,Dominique Pontier,Claire Picart,Fabien Mounet,Yves Martinezet al. eLife, 2023, 12, pp.RP88207. ⟨10.7554/eLife.88207⟩ Article dans une revue hal-04230426v1
Complementary peptides represent a credible alternative to agrochemicals by activating translation of targeted proteins Mélanie Ormancey,Bruno Guillotin,Rémy Merret,Laurent Camborde,Carine Duboéet al. Nature Communications, 2023, 14 (1), pp.254. ⟨10.1038/s41467-023-35951-0⟩ Article dans une revue hal-03949768v1
Nicotianamine synthase activity affects nucleolar iron accumulation and impacts rDNA silencing and RNA methylation in Arabidopsis Charlotte Montacié,Christophe Riondet,Lili Wei,Tommy Darrière,Alizée Weisset al. Journal of Experimental Botany, 2023, 74 (15), pp.4384-4400. ⟨10.1093/jxb/erad180⟩ Article dans une revue hal-04097969v1
Chromatin-associated YTHDC1 coordinates heat-induced reprogramming of gene expression Kalina Timcheva,Solenne Dufour,Leila Touat-Todeschini,Callum Burnard,Marie-Christine Carpentieret al. Cell Reports, 2022, 41 (11), pp.111784. ⟨10.1016/j.celrep.2022.111784⟩ Article dans une revue hal-03902782v1
Characterization of the complete plastome of &lt;i&gt;Delphinium montanum&lt;/i&gt;, a polyploid, endemic and endangered Pyrenean Larkspur Pascaline Salvado,Christel Llauro,Marie-Christine Carpentier,Valérie Delorme-Hinoux,Joris Bertrand Mitochondrial DNA Part B Resources, 2022, 7 (4), pp.590 - 592. ⟨10.1080/23802359.2022.2057248⟩ Article dans une revue hal-03672993v1
LARP6C orchestrates post-transcriptional reprogramming of gene expression during hydration to promote pollen tube guidance Elodie Billey,Said Hafidh,Isabel Cruz-Gallardo,Celso G Litholdo,Viviane Jeanet al. The Plant cell, 2021, 33 (8), pp.2637-2661. ⟨10.1093/plcell/koab131⟩ Article dans une revue hal-03275017v2
Fast and Efficient 5′P Degradome Library Preparation for Analysis of Co-Translational Decay in Arabidopsis Marie-Christine Carpentier,Cécile Bousquet-Antonelli,Rémy Merret Plants, 2021, 10 (3), pp.466. ⟨10.3390/plants10030466⟩ Article dans une revue hal-03209677v1
Construction and characterisation of a knock-down RNA interference line of OsNRPD1 in rice (Oryza sativa ssp japonica cv Nipponbare) Emilie Debladis,Tzuu-Fen Lee,Yan-Jiun Huang,Jui-Hsien Lu,Sandra M. Mathioniet al. Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1795), pp.20190338. ⟨10.1098/rstb.2019.0338⟩ Article dans une revue hal-04274817v1
Monitoring of XRN4 targets reveals the importance of co-translational decay during Arabidopsis development Marie-Christine Carpentier,Jean-Marc Deragon,Viviane Jean,Seng Hour Vichet Be,Cecile Bousquet-Antonelliet al. Plant Physiology, 2020, pp.00942.2020. ⟨10.1104/pp.20.00942⟩ Article dans une revue hal-02945049v1
The impact of transposable elements on the structure, evolution and function of the rice genome Roland Akakpo,Marie-Christine Carpentier,Yue Ie Hsing,Olivier Panaud New Phytologist, 2020, ⟨10.1111/nph.16356⟩ Article dans une revue hal-02434127v1
The m 6 A pathway protects the transcriptome integrity by restricting RNA chimera formation in plants Dominique Pontier,Claire Picart,Moaine El Baidouri,François Roudier,Tao Xuet al. Life Science Alliance, 2019, 2 (3), pp.e201900393. ⟨10.26508/lsa.201900393⟩ Article dans une revue hal-02505328v1
Retrotranspositional landscape of Asian rice revealed by 3000 genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-018-07974-5⟩ Article dans une revue hal-02098307v1
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza Joshua Stein,Yeisoo Yu,Dario Copetti,Derrick Zwickl,Li Zhanget al. Nature Genetics, 2018, 50 (2), pp.285-296. ⟨10.1038/s41588-018-0040-0⟩ Article dans une revue hal-02098593v1
Heat Shock Protein HSP101 Affects the Release of Ribosomal Protein mRNAs for Recovery after Heat Shock. Rémy Merret,Marie-Christine Carpentier,Jean-Jacques Favory,Claire Picart,Julie Descombinet al. Plant Physiology, 2017, 174 (2), pp.1216-1225. ⟨10.1104/pp.17.00269⟩ Article dans une revue hal-01594829v1
Nucleolar Proteome Analysis and Proteasomal Activity Assays Reveal a Link between Nucleolus and 26S Proteasome in A. thaliana Charlotte Montacié,Nathalie Durut,Alison Opsomer,Denise Palm,Pascale Comellaet al. Frontiers in Plant Science, 2017, 8, ⟨10.3389/fpls.2017.01815⟩ Article dans une revue hal-02115384v1
Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology Emilie Debladis,Christel Llauro,Marie-Christine Carpentier,Marie Mirouze,Olivier Panaud BMC Genomics, 2017, 18, art. 537 [8 p.]. ⟨10.1186/s12864-017-3753-zg⟩ Article dans une revue ird-01626046v1
Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants Sophie Lanciano,Marie-Christine Carpentier,Christel Llauro,Edouard Jobet,Dagmara Robakowska-Hyzoreket al. PLoS Genetics, 2017, 13 (2), pp.e1006630. ⟨10.1371/journal.pgen.1006630⟩ Article dans une revue hal-02098598v1
Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome Frederic Pontvianne,Marie-Christine Carpentier,Nathalie Durut,Veronika Pavlištová,Karin Jaškeet al. Cell Reports, 2016, 16 (6), pp.1574-1587. ⟨10.1016/j.celrep.2016.07.016⟩ Article dans une revue hal-02115369v1
Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana. Rémy Merret,Vinay K Nagarajan,Marie-Christine Carpentier,Sunhee Park,Jean-Jacques Favoryet al. Nucleic Acids Research, 2015, 43 (8), pp.4121-32 Article dans une revue hal-01180128v1
Widespread and frequent horizontal transfers of transposable elements in plants. Moaine El Baidouri,Marie-Christine Carpentier,Richard Cooke,Dongying Gao,Eric Lasserreet al. Genome Research, 2014, 24 (5), pp.831-8. ⟨10.1101/gr.164400.113⟩ Article dans une revue hal-01218140v1
XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress. Rémy Merret,Julie Descombin,Yu-Ting Juan,Jean-Jacques Favory,Marie-Christine Carpentieret al. Cell Reports, 2013, 5 (5), pp.1279-93. ⟨10.1016/j.celrep.2013.11.019⟩ Article dans une revue hal-01217835v1
Initial symbiont contact orchestrates host-organ-wide transcriptional changes that prime tissue colonization. Natacha Kremer,Eva E R Philipp,Marie-Christine Carpentier,Caitlin A Brennan,Lars Kraemeret al. Cell Host and Microbe, 2013, 14 (2), pp.183-94. ⟨10.1016/j.chom.2013.07.006⟩ Article dans une revue hal-00972298v1

Communication dans un congrès (7)

Control of secondary cell wall formation by Musashi-type translational regulators in trees. Hélène Fouassier,Alicia Kairouani,D. Pontier,C. Picart,Y Martinezet al. 14e Journées du Réseau Français des Parois, Aug 2024, Saint-Malo, France Communication dans un congrès hal-04848906v1
Mechanisms and impact of ribosomal RNA methylation in plants Sara Alina Neumann,Jacinthe Azevedo-Favory,Rémy Merret,Marie-Christine Carpentier,Julien Henryet al. 8ème colloque RNAOcc’ Club RNA Occitanie, Jun 2024, Toulouse, France Communication dans un congrès hal-04841625v1
Using long-read nanopore sequencing to unravel structural genomic variations in plants Marie-Christine Carpentier,Hshin-Ping Wu,Fu-Jin Wei,Christel Llauro,Marie Mirouzeet al. Nanopore London Calling 2019, Oxford Nanopore, May 2019, Londres (UK), United Kingdom Communication dans un congrès hal-04919461v1
Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. 22nd National Congress on Transposable Elements - MobileET- Bioinformatics Days, Jul 2019, Lyon, France Communication dans un congrès hal-04919526v1
Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes Marie-Christine Carpentier,Ernandes Manfroi,Fu-Jin Wei,Hshin-Ping Wu,Eric Lasserreet al. Plant and Animal Genomics Conference XXVII, Jan 2019, SAN DIEGO CA, United States Communication dans un congrès hal-04919501v1
Sequencing mobilome reveals real time transposable element activity in plants and animals Marie Mirouze,Sophie Lanciano,Sophie Lanciano,Marie-Christine Carpentier,Christel Llauroet al. Conference on Epigenetic & Chromatin Regulation of Plant Traits, EpiTRAITS, Jan 2016, Strasbourg, France Communication dans un congrès hal-04908203v1
Mobilome sequencing reveals real time transposable element activity in plants Marie Mirouze,Sophie Lanciano,Marie-Christine Carpentier,Christel Llauro,Alain Ghesquiere ICTE 2016, GDR Elements transposables, Apr 2016, Saint Malo, France Communication dans un congrès hal-04908135v1

Poster de conférence (3)

Detection of transcriptomic structural variations in wild rice using Nanopore direct RNA sequencing. Marie-Christine Carpentier,Christel Llauro,Eric Lasserre,Marie Mirouze,Rod A. Winget al. JOBIM 2024: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2024, Jun 2024, TOULOUSE Université Paul Sabatier, France Poster de conférence hal-04919310v1
Mechanisms and impact of ribosomal RNA methylation in plants Sara Alina Neumann,Jacinthe Azevedo-Favory,Rémy Merret,Marie-Christine Carpentier,Julien Henryet al. The 2024 Post-transcriptional Gene Regulation in Plants meeting, Sep 2024, Banyuls-Sur-Mer, France. Poster de conférence hal-04841568v1
Structural variation involving transposable elements associated with grain width in cultivated rice. Marie-Christine Carpentier,Christel Llauro,Wan-Yi Qiu,Yue-Ie Hsing,Olivier Panaud JOBIM 2022: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2022, Jul 2022, RENNES, France Poster de conférence hal-04919402v1

Chapitre d'ouvrage (1)

A Method to Identify Nucleolus-Associated Chromatin Domains (NADs) Marie-Christine Carpentier,Ariadna Picart-Picolo,Frederic Pontvianne Methods in Molecular Biology, 1675, pp.99-109, 2018, Plant Chromatin Dynamics, ⟨10.1007/978-1-4939-7318-7_7⟩ Chapitre d'ouvrage hal-02115397v1

Pré-publication, Document de travail (2)

A cryptic hybrid zone reveals the genomic basis of flower colour variation in a plant with a large and complex genome Pascaline Salvado,Anais Gibert,Slimane Chaib,Delphine Raviglione,Cedric Bertrandet al. 2026 Pré-publication, Document de travail hal-05506838v1
Loss of tRNA uridine thiolation affects mRNA translation, protein production, and sulfur-compound metabolism in Arabidopsis Arnaud Dannfald,Adrien Cadoudal,Marie-Christine Carpentier,Rémy Merret,Quentin Rigalet al. 2025 Pré-publication, Document de travail hal-05302244v1

Thèse (1)

Etude de l’activité transpositionnelle chez le genre Oryza à l’ère des nouvelles technologies de séquençage Marie-Christine Carpentier Génomique, Transcriptomique et Protéomique [q-bio.GN]. Université de Perpignan, 2021. Français. ⟨NNT : 2021PERP0053⟩ Thèse tel-03703524v1