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Marie Fablet

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Documents

Publications

Impact of Heat Stress on Transposable Element Expression and Derived Small RNAs in Drosophila subobscura

Alejandra Bodelón , Marie Fablet , Daniel Siqueira de Oliveira , Cristina Vieira , Maria Pilar García Guerreiro
Genome Biology and Evolution, 2023, 15 (11), ⟨10.1093/gbe/evad189⟩
Journal articles hal-04276658v1
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A quantitative, genome-wide analysis in Drosophila reveals transposable elements’ influence on gene expression is species-specific

Marie Fablet , Judit Salces-Ortiz , Angelo Jacquet , Bianca Menezes , Corentin Dechaud
Genome Biology and Evolution, 2023, 15 (9), pp.evad160. ⟨10.1093/gbe/evad160⟩
Journal articles hal-04195964v1
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ChimeraTE: a pipeline to detect chimeric transcripts derived from genes and transposable elements

Daniel Oliveira , Marie Fablet , Anaïs Larue , Agnès Vallier , Claudia Carareto
Nucleic Acids Research, inPress, 51 (18), pp.9764-9784. ⟨10.1093/nar/gkad671⟩
Journal articles hal-04195961v1
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High Stability of the Epigenome in Drosophila Interspecific Hybrids

Alejandra Bodelón , Marie Fablet , Philippe Veber , Cristina Vieira , Maria Pilar García Guerreiro
Genome Biology and Evolution, 2022, 14 (2), ⟨10.1093/gbe/evac024⟩
Journal articles hal-03594035v1
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Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma

Marlène Roy , Barbara Viginier , Camille A Mayeux , Maxime Ratinier , Marie Fablet
Genome Biology and Evolution, 2021, 13 (9), ⟨10.1093/gbe/evab207⟩
Journal articles hal-03423252v1
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The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions

Vincent Mérel , Patricia Gibert , Inessa Buch , Valentina Rodriguez Rada , Arnaud Estoup
Molecular Biology and Evolution, 2021, 38 (10), pp.4252-4267. ⟨10.1093/molbev/msab155⟩
Journal articles hal-03417234v1
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Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species

Pierre Marin , Angelo Jaquet , Justine Picarle , Marie Fablet , Vincent Merel
Genome Biology and Evolution, 2021, 13 (9), pp.evab208. ⟨10.1093/gbe/evab208⟩
Journal articles hal-03417240v1
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A transposon story : from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore

Mohamed Mourdas , Nguyet Thi-Minh Dang , Yuki Ogyama , Nelly Burlet , Bruno Mugat
Cells, 2020, 9 (8), pp.1776. ⟨10.3390/cells9081776⟩
Journal articles hal-02905128v1
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Transposable elements in Drosophila

Vincent Mérel , Matthieu Boulesteix , Marie Fablet , Cristina Vieira
Mobile DNA, 2020, 11 (1), ⟨10.1186/s13100-020-00213-z⟩
Journal articles hal-02957906v1
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Viral infection impacts transposable element transcript amounts in Drosophila

Marlène Roy , Barbara Viginier , Edouard Saint-Michel , Frederick Arnaud , Maxime Ratinier
Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (22), pp.12249-12257. ⟨10.1073/pnas.2006106117⟩
Journal articles hal-02918747v1
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Dynamic Interactions Between the Genome and an Endogenous Retrovirus: Tirant in Drosophila simulans Wild-Type Strains

Marie Fablet , Angelo Jacquet , Rita Rebollo , Annabelle A. Haudry , Carine Rey
G3, 2019, 9 (3), pp.855-865. ⟨10.1534/g3.118.200789⟩
Journal articles hal-02004384v1
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The somatic piRNA pathway controls germline transposition over generations

Bridlin Barckmann , Marianne El-Barouk , Alain Pélisson , Bruno Mugat , Blaise Maxime Li
Nucleic Acids Research, 2018, 46 (18), pp.9524 - 9536. ⟨10.1093/nar/gky761⟩
Journal articles hal-01904679v1

An attempt to select non-genetic variation in resistance to starvation and reduced chill coma recovery time in Drosophila melanogaster

Bianca Menezes , Judit Salces-Ortiz , Héloise Muller , Nelly Burlet , Sonia Martinez
Journal of Experimental Biology, 2018, 221 (23), pp.jeb186254. ⟨10.1242/jeb.186254⟩
Journal articles hal-01965032v1
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TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes

Emmanuelle Lerat , Marie Fablet , Laurent Modolo , Hélène Lopez-Maestre , Cristina Vieira
Nucleic Acids Research, 2017, 45, pp.13. ⟨10.1093/nar/gkw953⟩
Journal articles hal-01524877v1
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Variable expression levels detected in the Drosophila effectors of piRNA biogenesis

Marie Fablet , Abdou Akkouche , Virginie Braman , Cristina Vieira
Gene, 2014, 537 (1), pp.149-153. ⟨10.1016/j.gene.2013.11.095⟩
Journal articles hal-00922704v1
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Host Control of Insect Endogenous Retroviruses: Small RNA Silencing and Immune Response

Marie Fablet
Viruses, 2014, 6, pp.4447-4464. ⟨10.3390/v6114447⟩
Journal articles hal-02071534v1

Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells

Abdou Akkouche , Thomas Grentzinger , Marie Fablet , Claudia Armenise , Nelly Burlet
EMBO Reports, 2013, 14 (5), pp.458-64. ⟨10.1038/embor.2013.38⟩
Journal articles hal-00850319v1

tirant, a newly discovered active endogenous retrovirus in Drosophila simulans.

Abdou Akkouche , Rita Rebollo , Nelly Burlet , Caroline Esnault , Sonia Martinez
Journal of Virology, 2012, 86 (7), pp.3675-3681. ⟨10.1128/JVI.07146-11⟩
Journal articles hal-00763499v1

A comparative analysis of the amounts and dynamics of transposable elements in natural populations of Drosophila melanogaster and Drosophila simulans.

Cristina Vieira , Marie Fablet , Emmanuelle Lerat , Matthieu Boulesteix , Rita Rebollo
Journal of Environmental Radioactivity, 2012, 113, pp.83-86. ⟨10.1016/j.jenvrad.2012.04.001⟩
Journal articles hal-00763500v1

Evolvability, epigenetics and transposable elements

Marie Fablet , C. Vieira
Biomolecular concepts, 2011, 2, pp.333-341
Journal articles hal-02299281v1

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila.

Marie Fablet , Emmanuelle Lerat , Rita Rebollo , Béatrice Horard , Nelly Burlet
FASEB Journal, 2009, 23 (5), pp.1482-9. ⟨10.1096/fj.08-123513⟩
Journal articles hal-00850396v1

Evolutionary Origin and Functions of Retrogene Introns

M. Fablet , M. Bueno , L. Potrzebowski , H. Kaessmann
Molecular Biology and Evolution, 2009, 26(9), pp.2147-2156
Journal articles hal-00428401v1

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila

M. Fablet , E. Lerat , R. Rebollo , B. Horard , N. Burlet
FASEB Journal, 2009, 23, pp.54-62
Journal articles hal-00428323v1

Infra- and Transspecific Clues to Understanding the Dynamics of Transposable Elements

Cristina Vieira , M. Fablet , E. Lerat
genome dyn stab, 2009, --, pp.115-123
Journal articles hal-00428338v1

Evolutionary Pathways of the tirant LTR Retrotransposon in the Drosophila melanogaster Subgroup of Species

M. Fablet , S. Souames , C. Biémont , Cristina Vieira
Journal of Molecular Evolution, 2007, 64, pp.438-447
Journal articles hal-00434598v1

The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes

Marie Fablet , Rita Rebollo , Christian Biémont , Cristina Vieira
Gene, 2007, 390 (1-2), pp.84-91. ⟨10.1016/j.gene.2006.08.005⟩
Journal articles hal-02665818v1

Ongoing loss of the tirant transposable element in natural populations of Drosophila simulans

M. Fablet , J.F. Donald , C. Biémont , Cristina Vieira
Gene, 2006, 375, pp.54-62
Journal articles hal-00427929v1

Syndrome de Klinefelter, rôle du chromosome Y dans l’espérance de vie humaine ?

J Teoli, , C Bardel, , M Fablet, , G Marais, , F Gueyffier,
Congrès de la Société Française d'Endocrinologie, 2020, Marseille, France. pp.194, ⟨10.1016/j.ando.2020.07.150⟩
Conference papers hal-03060317v1

Transposable Element Dynamics in an Invasive Species

V. Mérel , Marie Fablet , M. Boulesteix , Arnaud A Estoup , Patricia Gibert
Congrès National des Éléments Transposables (CNET 2018), Jul 2018, Clermont-Ferrand, France
Conference papers hal-02786547v1

Self and Nonself from a Genomic Perspective: Transposable Elements

Marie Fablet , Judit Salces-Ortiz , Bianca Fraga Menezes , Marlène Roy , Cristina Vieira
Evolutionary Biology: Self/Nonself Evolution, Species and Complex Traits Evolution, Methods and Concepts, 2 (5), Springer International Publishing, pp.111-128, 2017, ⟨10.1007/978-3-319-61569-1_6⟩
Book sections hal-03323222v1