Marie Fablet

Publications

Article dans une revue (32)

Transposable element expression is associated with sex chromosome number in humans Jordan Teoli,Miriam Merenciano,Marie Fablet,Anamaria Necsulea,Daniel Siqueira-De-Oliveiraet al. PLoS Genetics, 2025, 21 (6), pp.e1011668. ⟨10.1371/journal.pgen.1011668⟩ Article dans une revue hal-05183750v1
Gene and transposable element expression in response to stress in temperate and tropical populations of Drosophila Miriam Merenciano,Daniel Oliveira,Judit Salces-Ortiz,Rita Rebollo,Bianca Manfréet al. Mobile DNA, 2025, 16 (1), pp.35. ⟨10.1186/s13100-025-00372-x⟩ Article dans une revue hal-05299089v1
Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues Rita Rebollo,Pierre Gerenton,Eric Cumunel,Arnaud Mary,François Sabotet al. Peer Community Journal, 2024, 4 (e89), ⟨10.24072/pcjournal.457⟩ Article dans une revue hal-04285238v1
Effects of Arboviral Infections on Transposable Element Transcript Levels in &lt;i&gt;Aedes aegypti&lt;/i&gt; Chloé Garambois,Matthieu Boulesteix,Marie Fablet Genome Biology and Evolution, 2024, 16 (5), pp.evae092. ⟨10.1093/gbe/evae092⟩ Article dans une revue hal-04611291v1
ChimeraTE: a pipeline to detect chimeric transcripts derived from genes and transposable elements Daniel Oliveira,Marie Fablet,Anaïs Larue,Agnès Vallier,Claudia Cararetoet al. Nucleic Acids Research, In press, 51 (18), pp.9764-9784. ⟨10.1093/nar/gkad671⟩ Article dans une revue hal-04195961v1
A quantitative, genome-wide analysis in Drosophila reveals transposable elements’ influence on gene expression is species-specific Marie Fablet,Judit Salces-Ortiz,Angelo Jacquet,Bianca Menezes,Corentin Dechaudet al. Genome Biology and Evolution, 2023, 15 (9), pp.evad160. ⟨10.1093/gbe/evad160⟩ Article dans une revue hal-04195964v1
Transposable element expression with variation in sex chromosome number: insights into a toxic Y effect on human longevity Jordan Teoli,Miriam Merenciano,Marie Fablet,Anamaria Necsulea,Daniel Siqueira-De-Oliveiraet al. Peer Community In Genomics, 2023, ⟨10.1101/2023.08.03.550779⟩ Article dans une revue hal-04923419v1
Impact of Heat Stress on Transposable Element Expression and Derived Small RNAs in Drosophila subobscura Alejandra Bodelón,Marie Fablet,Daniel Siqueira de Oliveira,Cristina Vieira,Maria Pilar García Guerreiro Genome Biology and Evolution, 2023, 15 (11), pp.evad189. ⟨10.1093/gbe/evad189⟩ Article dans une revue hal-04276658v1
High Stability of the Epigenome in &lt;i&gt;Drosophila&lt;/i&gt; Interspecific Hybrids Alejandra Bodelón,Marie Fablet,Philippe Veber,Cristina Vieira,Maria Pilar García Guerreiro Genome Biology and Evolution, 2022, 14 (2), ⟨10.1093/gbe/evac024⟩ Article dans une revue hal-03594035v1
Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma Marlène Roy,Barbara Viginier,Camille A Mayeux,Maxime Ratinier,Marie Fablet Genome Biology and Evolution, 2021, 13 (9), ⟨10.1093/gbe/evab207⟩ Article dans une revue hal-03423252v1
The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions Vincent Mérel,Patricia Gibert,Inessa Buch,Valentina Rodriguez Rada,Arnaud Estoupet al. Molecular Biology and Evolution, 2021, 38 (10), pp.4252-4267. ⟨10.1093/molbev/msab155⟩ Article dans une revue hal-03417234v1
Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species Pierre Marin,Angelo Jaquet,Justine Picarle,Marie Fablet,Vincent Merelet al. Genome Biology and Evolution, 2021, 13 (9), pp.evab208. ⟨10.1093/gbe/evab208⟩ Article dans une revue hal-03417240v1
Transposable elements in Drosophila Vincent Mérel,Matthieu Boulesteix,Marie Fablet,Cristina Vieira Mobile DNA, 2020, 11 (1), ⟨10.1186/s13100-020-00213-z⟩ Article dans une revue hal-02957906v1
Viral infection impacts transposable element transcript amounts in Drosophila Marlène Roy,Barbara Viginier,Edouard Saint-Michel,Frederick Arnaud,Maxime Ratinieret al. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (22), pp.12249-12257. ⟨10.1073/pnas.2006106117⟩ Article dans une revue hal-02918747v1
A transposon story : from TE content to TE dynamic invasion of Drosophila genomes using the single-molecule sequencing technology from Oxford Nanopore Mohamed Mourdas,Nguyet Thi-Minh Dang,Yuki Ogyama,Nelly Burlet,Bruno Mugatet al. Cells, 2020, 9 (8), pp.1776. ⟨10.3390/cells9081776⟩ Article dans une revue hal-02905128v1
Dynamic Interactions Between the Genome and an Endogenous Retrovirus: Tirant in Drosophila simulans Wild-Type Strains Marie Fablet,Angelo Jacquet,Rita Rebollo,Annabelle A. Haudry,Carine Reyet al. G3, 2019, 9 (3), pp.855-865. ⟨10.1534/g3.118.200789⟩ Article dans une revue hal-02004384v1
The somatic piRNA pathway controls germline transposition over generations Bridlin Barckmann,Marianne El-Barouk,Alain Pélisson,Bruno Mugat,Blaise Maxime Liet al. Nucleic Acids Research, 2018, 46 (18), pp.9524 - 9536. ⟨10.1093/nar/gky761⟩ Article dans une revue hal-01904679v1
An attempt to select non-genetic variation in resistance to starvation and reduced chill coma recovery time in Drosophila melanogaster Bianca Menezes,Judit Salces-Ortiz,Héloise Muller,Nelly Burlet,Sonia Martinezet al. Journal of Experimental Biology, 2018, 221 (23), pp.jeb186254. ⟨10.1242/jeb.186254⟩ Article dans une revue hal-01965032v1
TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes Emmanuelle Lerat,Marie Fablet,Laurent Modolo,Hélène Lopez-Maestre,Cristina Vieira Nucleic Acids Research, 2017, 45, pp.13. ⟨10.1093/nar/gkw953⟩ Article dans une revue hal-01524877v1
Host Control of Insect Endogenous Retroviruses: Small RNA Silencing and Immune Response Marie Fablet Viruses, 2014, 6, pp.4447-4464. ⟨10.3390/v6114447⟩ Article dans une revue hal-02071534v1
Variable expression levels detected in the Drosophila effectors of piRNA biogenesis Marie Fablet,Abdou Akkouche,Virginie Braman,Cristina Vieira Gene, 2014, 537 (1), pp.149-153. ⟨10.1016/j.gene.2013.11.095⟩ Article dans une revue hal-00922704v1
Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells Abdou Akkouche,Thomas Grentzinger,Marie Fablet,Claudia Armenise,Nelly Burletet al. EMBO Reports, 2013, 14 (5), pp.458-64. ⟨10.1038/embor.2013.38⟩ Article dans une revue hal-00850319v1
tirant, a newly discovered active endogenous retrovirus in Drosophila simulans. Abdou Akkouche,Rita Rebollo,Nelly Burlet,Caroline Esnault,Sonia Martinezet al. Journal of Virology, 2012, 86 (7), pp.3675-3681. ⟨10.1128/JVI.07146-11⟩ Article dans une revue hal-00763499v1
A comparative analysis of the amounts and dynamics of transposable elements in natural populations of Drosophila melanogaster and Drosophila simulans. Cristina Vieira,Marie Fablet,Emmanuelle Lerat,Matthieu Boulesteix,Rita Rebolloet al. Journal of Environmental Radioactivity, 2012, 113, pp.83-86. ⟨10.1016/j.jenvrad.2012.04.001⟩ Article dans une revue hal-00763500v1
Evolvability, epigenetics and transposable elements Marie Fablet,C. Vieira Biomolecular concepts, 2011, 2, pp.333-341 Article dans une revue hal-02299281v1
Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila. Marie Fablet,Emmanuelle Lerat,Rita Rebollo,Béatrice Horard,Nelly Burletet al. FASEB Journal, 2009, 23 (5), pp.1482-9. ⟨10.1096/fj.08-123513⟩ Article dans une revue hal-00850396v1
Evolutionary Origin and Functions of Retrogene Introns M. Fablet,M. Bueno,L. Potrzebowski,H. Kaessmann Molecular Biology and Evolution, 2009, 26(9), pp.2147-2156 Article dans une revue hal-00428401v1
Infra- and Transspecific Clues to Understanding the Dynamics of Transposable Elements Cristina Vieira,M. Fablet,E. Lerat genome dyn stab, 2009, --, pp.115-123 Article dans une revue hal-00428338v1
Genomic environment influences the dynamics of the &lt;i&gt;tirant&lt;/i&gt; LTR retrotransposon in &lt;i&gt;Drosophila&lt;/i&gt; M. Fablet,E. Lerat,R. Rebollo,B. Horard,N. Burletet al. FASEB Journal, 2009, 23, pp.54-62 Article dans une revue hal-00428323v1
The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes Marie Fablet,Rita Rebollo,Christian Biémont,Cristina Vieira Gene, 2007, 390 (1-2), pp.84-91. ⟨10.1016/j.gene.2006.08.005⟩ Article dans une revue istex hal-02665818v1
Evolutionary Pathways of the tirant LTR Retrotransposon in the &lt;i&gt;Drosophila melanogaster&lt;/i&gt; Subgroup of Species M. Fablet,S. Souames,C. Biémont,Cristina Vieira Journal of Molecular Evolution, 2007, 64, pp.438-447 Article dans une revue hal-00434598v1
Ongoing loss of the tirant transposable element in natural populations of &lt;i&gt;Drosophila simulans&lt;/i&gt; M. Fablet,J.F. Donald,C. Biémont,Cristina Vieira Gene, 2006, 375, pp.54-62 Article dans une revue hal-00427929v1

Communication dans un congrès (5)

Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster. Anaïs Larue,Miriam Merenciano,S. Janillon,Marie Fablet,Patricia Gibertet al. Conférence Jacques Monod Life is plastic, Jun 2024, Roscoff, France Communication dans un congrès hal-04805331v1
Contribution of variable transposable element content on phenotype and plasticity in Drosophila melanogaster Anais Larue,Miriam Merenciano,S. Janillon,Alexander Mauro,Agnès Vallieret al. GDR Mobil'ET, Dec 2024, Paris, France Communication dans un congrès hal-05419615v1
Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster. Anaïs Larue,Miriam Merenciano,S. Janillon,Marie Fablet,Patricia Gibertet al. Annual meeting of the Society of Molecular Biology and Evolution (SMBE), Jul 2024, Puerto Vallarta, Mexico Communication dans un congrès hal-04805367v1
Syndrome de Klinefelter, rôle du chromosome Y dans l’espérance de vie humaine ? Jordan Teoli,Claire Bardel,Marie Fablet,Gabriel Marais,François Gueyffieret al. 36ème Congrès de la Société Française d'Endocrinologie (SFE Marseille 2020), Oct 2020, Marseille, France. pp.194, ⟨10.1016/j.ando.2020.07.150⟩ Communication dans un congrès hal-03060317v1
Transposable Element Dynamics in an Invasive Species V. Mérel,Marie Fablet,M. Boulesteix,Arnaud A Estoup,Patricia Gibertet al. Congrès National des Éléments Transposables (CNET 2018), Jul 2018, Clermont-Ferrand, France Communication dans un congrès hal-02786547v1

Poster de conférence (4)

Contribution of variable transposable element content on phenotype and plasticity in Drosophila melanogaster Anais Larue,Miriam Merenciano,S. Janillon,Alexander Mauro,Agnès Vallieret al. Decryp'thèse, Feb 2025, Villeurbanne, France Poster de conférence hal-05419627v1
Contribution of TE to the phenotype and plasticity in Drosophila melanogaster Anaïs Larue,Miriam Merenciano,S. Janillon,Camille Mayeux,Marie Fabletet al. 27th European Drosophila Conference, Oct 2024, Lyon, France Poster de conférence hal-04783569v1
Contribution of variable TE content on phenotype and plasticity in Drosophila melanogaster Anaïs Larue,Miriam Merenciano,S. Janillon,Agnès Vallier,Marie Fabletet al. International congress of transposable elements, Apr 2024, Saint-Malo, France Poster de conférence hal-04788765v1
Contribution of TE to the phenotype and plasticity in Drosophila melanogaster Anaïs Larue,Miriam Merenciano,S. Janillon,Camille Mayeux,Marie Fabletet al. CNET (24th congrès national des éléments transposables), Jul 2023, Perpignan, France Poster de conférence hal-04790763v1

Chapitre d'ouvrage (1)

Self and Nonself from a Genomic Perspective: Transposable Elements Marie Fablet,Judit Salces-Ortiz,Bianca Fraga Menezes,Marlène Roy,Cristina Vieira Evolutionary Biology: Self/Nonself Evolution, Species and Complex Traits Evolution, Methods and Concepts, 2 (5), Springer International Publishing, pp.111-128, 2017, ⟨10.1007/978-3-319-61569-1_6⟩ Chapitre d'ouvrage hal-03323222v1

Pré-publication, Document de travail (2)

Exploring the role of transposable elements to sex gap in longevity in Drosophila species Miriam Merenciano,Sonia Janillon,Camille Mermet-Bouvier,Nelly Burlet,Valentina Rodriguez-Radaet al. 2025 Pré-publication, Document de travail hal-04941501v1
Intricate interactions between antiviral immunity and transposable element control in Drosophila Camille A Mayeux,Anaïs Larue,Daniel S Oliveira,Marion Varoqui,Hélène Henriet al. 2024 Pré-publication, Document de travail hal-04791902v1