Marie-Laure Martin

Publications

Article dans une revue (88)

Modeling plant phenotypic plasticity and its underlying genetic architecture: a comparative study Sebastian Arenas,Yacine Djabali,Renaud Rincent,Philippe Cubry,Marie-Laure Martinet al. Journal of Experimental Botany, 2025, 76 (8), pp.2239-2251. ⟨10.1093/jxb/eraf013⟩ Article dans une revue hal-05087340v1
High host density promotes ash dieback Marie-Laure Martin,François Ningre,Arnaud Dowkiw,Noël Le Goff,Benoit Marçais Plant Pathology, 2025, 74 (5), pp.1366-1375. ⟨10.1111/ppa.14099⟩ Article dans une revue hal-05012488v1
MCQR : Enhancing the Processing and Analysis of Quantitative Proteomics Data by Incorporating Chromatography and Mass Spectrometry Information Thierry Balliau,Anne Frambourg,Olivier Langella,Marie-Laure Martin,Michel Zivyet al. Journal of Proteome Research, 2025, ⟨10.1021/acs.jproteome.4c01119⟩ Article dans une revue hal-05087344v1
Integrative systems biology of wheat susceptibility to Fusarium graminearum uncovers a conserved gene regulatory network and identifies master regulators targeted by fungal core effectors Florian Rocher,Samir Dou,Géraldine Philippe,Marie-Laure Martin,Philippe Labelet al. BMC Biology, 2024, 22 (1), ⟨10.1186/s12915-024-01852-x⟩ Article dans une revue hal-04501202v1
Trade-off between predictive performance and FDR control for high-dimensional Gaussian model selection Perrine Lacroix,Marie-Laure Martin Electronic Journal of Statistics , 2024, 18 (2), pp.2886-2930. ⟨10.1214/24-EJS2260⟩ Article dans une revue hal-03978309v3
Expression of cell-wall related genes is highly variable and correlates with sepal morphology Diego A Hartasánchez,Annamaria Kiss,Virginie Battu,Charline Soraru,Abigail Delgado-Vaqueraet al. Peer Community Journal, 2023, 3 (93), ⟨10.24072/pcjournal.327⟩ Article dans une revue hal-04248384v1
A localized osmotic stress activates systemic responses to N-limitation in Medicago truncatula-Sinorhizobium symbiotic plants Marie-Laure Martin,Marjorie Pervent,Ilana Lambert,Stefano Colella,Mathilde Tancelinet al. Frontiers in Plant Science, 2023, 14, pp.1288070. ⟨10.3389/fpls.2023.1288070⟩ Article dans une revue hal-04276739v1
Plasticity QTLs specifically contribute to the genotype × water availability interaction in maize Yacine Djabali,Renaud Rincent,Marie-Laure Martin,Mélisande Blein-Nicolas TAG Theoretical and Applied Genetics, 2023, 136 (11), pp.228. ⟨10.1007/s00122-023-04458-z⟩ Article dans une revue hal-04002996v2
Analyzing Multifactorial RNA-Seq Experiments with DiCoExpress Kevin Baudry,Christine Paysant-Le Roux,Stefano Colella,Benoît Castandet,Marie-Laure Martin-Magniette Journal of visualized experiments : JoVE, 2022, 185, pp.e62566. ⟨10.3791/62566⟩ Article dans une revue hal-04274577v1
A comprehensive map of preferentially located motifs reveals distinct proximal cis -regulatory elements in plants Julien Rozière,Cécile Guichard,Véronique Brunaud,Marie-Laure Martin,Sylvie Coursol Frontiers in Plant Science, 2022, 13, pp.976371. ⟨10.3389/fpls.2022.976371⟩ Article dans une revue hal-04400803v1
Untargeted metabolomic analyses reveal the diversity and plasticity of the specialized metabolome in seeds of different Camelina sativa genotypes Stéphanie Boutet,Léa Barreda,François Perreau,Jean‐chrisologue Totozafy,Caroline Mauveet al. The Plant Journal, 2022, 110 (1), pp.147-165. ⟨10.1111/tpj.15662⟩ Article dans une revue hal-03738690v1
A cell wall-associated gene network shapes leaf boundary domains Nathalie Bouré,Alexis Peaucelle,Magali Goussot,Bernard Adroher,Ludivine Soubigou-Taconnatet al. Development (Cambridge, England), 2022, 149 (11), pp.dev200359. ⟨10.1242/dev.200359⟩ Article dans une revue hal-03737566v1
Fusarium graminearum infection strategy in wheat involves a highly conserved genetic program that controls the expression of a core effectome Florian Rocher,Tarek Alouane,Géraldine Philippe,Marie-Laure Martin,Philippe Labelet al. International Journal of Molecular Sciences, 2022, 23 (3), pp.22. ⟨10.3390/ijms23031914⟩ Article dans une revue hal-03583788v1
Involvement of SUT1 and SUT2 Sugar Transporters in the Impairment of Sugar Transport and Changes in Phloem Exudate Contents in Phytoplasma-Infected Plants Federica de Marco,Brigitte Batailler,Michael R. Thorpe,Frédérique Razan,Rozenn Le Hiret al. International Journal of Molecular Sciences, 2021, 22 (2), pp.745. ⟨10.3390/ijms22020745⟩ Article dans une revue hal-02935915v1
Systemic control of nodule formation by plant nitrogen demand requires autoregulation-dependent and independent mechanisms Marjorie Pervent,Ilana Lambert,Marc Tauzin,Alicia Karouani,Martha Nigget al. Journal of Experimental Botany, 2021, 72 (22), pp.7942-7956. ⟨10.1093/jxb/erab374⟩ Article dans une revue hal-03596911v1
Error rate control for classification rules in multiclass mixture models Tristan Mary-Huard,Vittorio Perduca,Marie-Laure Martin-Magniette,Gilles Blanchard The international journal of biostatistics, 2021, 18 (2), pp.381-396. ⟨10.1515/ijb-2020-0105⟩ Article dans une revue hal-03357461v1
A Case of Gene Fragmentation in Plant Mitochondria Fixed by the Selection of a Compensatory Restorer of Fertility-Like PPR Gene Tan-Trung Nguyen,Noelya Planchard,Jennifer Dahan,Nadège Arnal,Sandrine Balzergueet al. Molecular Biology and Evolution, 2021, 38 (8), pp.3445 - 3458. ⟨10.1093/molbev/msab115⟩ Article dans une revue hal-05250764v1
Omics data reveal putative regulators of einkorn grain protein composition under sulfur deficiency Titouan Bonnot,Pierre Martre,Victor Hatte,Mireille Dardevet,Philippe Leroyet al. Plant Physiology, 2020, 183 (2), pp.501-516. ⟨10.1104/pp.19.00842⟩ Article dans une revue hal-02553742v1
DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models Ilana Lambert,Christine Paysant-Le Roux,Stefano Colella,Marie-Laure Martin-Magniette Plant Methods, 2020, 16 (1), ⟨10.1186/s13007-020-00611-7⟩ Article dans une revue hal-02921433v1
Landscape of the Noncoding Transcriptome Response of Two Arabidopsis Ecotypes to Phosphate Starvation Thomas Blein,Coline Balzergue,Thomas Roulé,Marc Gabriel,Laetitia Scalisiet al. Plant Physiology, 2020, 183 (3), pp.1058-1072. ⟨10.1104/pp.20.00446⟩ Article dans une revue cea-02962421v1
Immediate targets of ETTIN suggest a key role for pectin methylesterase inhibitors in the control of Arabidopsis gynecium development Amélie Andres Robin,Mathieu C Reymond,Géraldine Brunoud,Martin-Magniette Marie-Laure,Françoise Monegeret al. Plant Signaling and Behavior, 2020, 15 (7), pp.1771937. ⟨10.1080/15592324.2020.1771937⟩ Article dans une revue hal-03068443v1
Immune-focused multi-omics analysis of prostate cancer: leukocyte Ig-Like receptors are associated with disease progression Benjamin Vittrant,Alain Bergeron,Oscar Eduardo Molina,Mickael Leclercq,Xavier-Philippe Légaréet al. OncoImmunology, 2020, 9 (1), pp.1851950. ⟨10.1080/2162402X.2020.1851950⟩ Article dans une revue hal-03219229v1
Responses of mature symbiotic nodules to the whole-plant systemic nitrogen signaling Ilana Lambert,Marjorie Pervent,Antoine Le Quéré,Gilles Clement,Marc Tauzinet al. Journal of Experimental Botany, 2020, 71 (16), pp.5039-5052. ⟨10.1093/jxb/eraa221⟩ Article dans une revue hal-02921428v1
The Consequences of a Disruption in Cyto-Nuclear Coadaptation on the Molecular Response to a Nitrate Starvation in Arabidopsis Fabien Chardon,Gwendal Cueff,Etienne Delannoy,Fabien Aubé,Aurélia Lornacet al. Plants, 2020, 9 (5), pp.573. ⟨10.3390/plants9050573⟩ Article dans une revue hal-02959209v1
Identification of a Transcriptomic Prognostic Signature by Machine Learning Using a Combination of Small Cohorts of Prostate Cancer Benjamin Vittrant,Mickael Leclercq,Marie-Laure Martin-Magniette,Colin Collins,Alain Bergeronet al. Frontiers in Genetics, 2020, 11, ⟨10.3389/fgene.2020.550894⟩ Article dans une revue hal-03269716v1
Gene expression predictions and networks in natural populations supports the omnigenic theory Aurélien Chateigner,Marie-Claude Lesage-Descauses,Odile Rogier,Véronique Jorge,Jean-Charles Lepléet al. BMC Genomics, 2020, 21 (1), pp.1-16. ⟨10.1186/s12864-020-06809-2⟩ Article dans une revue hal-02902844v1
Large-Scale Automatic Feature Selection for Biomarker Discovery in High-Dimensional OMICs Data Mickael Leclercq,Benjamin Vittrant,Marie-Laure Magniette,Marie Pier Scott Boyer,Olivier Perinet al. Frontiers in Genetics, 2019, 10, pp.452. ⟨10.3389/fgene.2019.00452⟩ Article dans une revue hal-02623625v1
In situ transcriptomic and metabolomic study of the loss of photosynthesis in the leaves of mixotrophic plants exploiting fungi Félix Lallemand,Marie-Laure Martin-Magniette,Françoise Gilard,Françoise Gilard,Bertrand Gakièreet al. The Plant Journal, 2019, 98 (5), pp.826-841. ⟨10.1111/tpj.14276⟩ Article dans une revue hal-02617745v1
Sampling uncertainty versus method uncertainty: A general framework with applications to omics biomarker selection Simon Klau,Marie-Laure Martin-Magniette,Anne-Laure Boulesteix,Sabine Hoffmann Biometrical Journal, 2019, 62 (3), pp.670-687. ⟨10.1002/bimj.201800309⟩ Article dans une revue hal-02618372v1
Novel cytonuclear combinations modify Arabidopsis thaliana seed physiology and vigor Clément Boussardon,Marie-Laure Martin-Magniette,Béatrice Godin,Abdelilah Benamar,Benjamin Vittrantet al. Frontiers in Plant Science, 2019, 10, pp.32. ⟨10.3389/fpls.2019.00032⟩ Article dans une revue hal-02557423v1
A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize Clément Cuello,Aurélie Baldy,Véronique Brunaud,Johann Joets,Etienne Delannoyet al. PLoS ONE, 2019, 14 (12), pp.e0227011. ⟨10.1371/journal.pone.0227011⟩ Article dans une revue hal-02429157v1
Genetic variability of the phloem sap metabolite content of maize (Zea mays L.) during the kernel-filling period (vol 252, pg 347, 2016) Zhazira Yesbergenova-Cuny,Sylvie Dinant,Marie-Laure Martin-Magniette,Isabelle Quillere,Patrick P. Armengaudet al. Plant Science, 2018, 272, pp.207-207. ⟨10.1016/j.plantsci.2018.04.022⟩ Article dans une revue hal-02618059v1
Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo Kaori Sakai,Ludivine Taconnat,Néro Borrega,Jennifer Yansouni,Véronique Brunaudet al. Plant Methods, 2018, 14, pp.10. ⟨10.1186/s13007-018-0275-x⟩ Article dans une revue hal-02625394v1
Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat Elodie Rey,Michaël M. Abrouk,Gabriel Keeble-Gagnère,Miroslava Karafiatova,Jan Vránaet al. Plant Biotechnology Journal, 2018, 16 (10), pp.1767-1777. ⟨10.1111/pbi.12913⟩ Article dans une revue hal-02621747v1
Transcriptome analysis in Hevea brasiliensis latex revealed changes in hormone signalling pathways during ethephon stimulation and consequent Tapping Panel Dryness Pascal Montoro,Shuangyang Wu,Bénédicte Favreau,Eva Herlinawati,Cécile Labruneet al. Scientific Reports, 2018, 8, pp.8483. ⟨10.1038/s41598-018-26854-y⟩ Article dans une revue hal-02624945v1
Nitrogen limitation alters the response of specific genes to biotic stress Mahsa Farjad,Martine Rigault,Stephanie Pateyron,Marie-Laure Martin-Magniette,Annemarie Krappet al. International Journal of Molecular Sciences, 2018, 19 (11), pp.3364. ⟨10.3390/ijms19113364⟩ Article dans une revue hal-02625219v1
Cytonuclear interactions affect adaptive traits of the annual plant Arabidopsis thaliana in the field Fabrice Roux,Tristan Mary-Huard,Elise Barillot,Estelle Wenes,Lucy Botranet al. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (13), pp.3687-3682. ⟨10.1073/pnas.1520687113⟩ Article dans une revue hal-01294000v1
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis Guillem Rigaill,Sandrine Balzergue,Véronique Brunaud,Eddy Blondet,Andrea Rauet al. Briefings in Bioinformatics, 2016, 19 (1), pp.65-76. ⟨10.1093/bib/bbw092⟩ Article dans une revue hal-01595551v1
Genetic variability of the phloem sap metabolite content of maize ([i]Zea mays[/i] L.) during the kernel-filling period Zhazira Yesbergenova-Cuny,Sylvie Dinant,Marie-Laure Magniette,Isabelle Quillere,Patrick Armengaudet al. Plant Science, 2016, 252, pp.347-357. ⟨10.1016/j.plantsci.2016.08.007⟩ Article dans une revue istex hal-01363555v1
On the estimation of mixtures of Poisson regression models with large number of components Panagiotis Papastamoulis,Marie-Laure Magniette,Cathy Maugis-Rabusseau Computational Statistics and Data Analysis, 2016, 93, pp.97-106. ⟨10.1016/j.csda.2014.07.005⟩ Article dans une revue istex hal-01532512v1
Altered DNA methylation associated with an abnormal liver phenotype in a cattle model with a high incidence of perinatal pathologies Hélène Kiefer,Luc Jouneau,Evelyne E. Campion,Delphine Rousseau-Ralliard,Thibaut Larcheret al. Scientific Reports, 2016, 6, pp.38869. ⟨10.1038/srep38869⟩ Article dans une revue hal-02633915v1
Co-expression analysis of high-throughput transcriptome sequencing data with Poisson mixture models Andrea Rau,Cathy Maugis-Rabusseau,Marie-Laure Magniette,Gilles Celeux Bioinformatics, 2015, 31 (9), pp.1420-1427. ⟨10.1093/bioinformatics/btu845⟩ Article dans une revue hal-01108821v2
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response Rim Zaag,Jean-Philippe Tamby,Cecile Guichard,Zakia Tariq,Guillem Rigaillet al. Nucleic Acids Research, 2015, 43 (Database issue), pp.D1010-D1017. ⟨10.1093/nar/gku1155⟩ Article dans une revue hal-01137554v1
Salmonella enterica Flagellin Is Recognized via FLS2 and Activates PAMP-Triggered Immunity in Arabidopsis thaliana Ana Victoria Garcia Malervi,Amélie Charrier,Adam Schikora,Jean Bigeard,Stephanie Pateyronet al. Molecular Plant, 2014, 7 (4), pp.657 - 674. ⟨10.1093/mp/sst145⟩ Article dans une revue hal-01197624v1
Unexpectedly low nitrogen acquisition and absence of root architecture adaptation to nitrate supply in a [i]Medicago truncatula[/i] highly branched root mutant Virginie Bourion,Chantal Martin,Henri de Larambergue,Françoise Jacquin,Gregoire Aubertet al. Journal of Experimental Botany, 2014, 65 (9), pp.2365-2380. ⟨10.1093/jxb/eru124⟩ Article dans une revue hal-01197628v1
Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences Nicolas Frei Dit Frey,Anna Victoria Garcia,Jean Bigeard,Rim Zaag,Eduardo Buesoet al. Genome Biology, 2014, 15 (6), pp.R87. ⟨10.1186/gb-2014-15-6-r87⟩ Article dans une revue hal-02631808v1
Comparing Model Selection and Regularization Approaches to Variable Selection in Model-Based Clustering Gilles Celeux,Marie-Laure Martin-Magniette,Cathy Maugis,Adrian E. Raftery Journal de la Société Française de Statistique, 2014, 155 (2), pp.57-71 Article dans une revue hal-00943473v1
Hidden Markov Models with mixtures as emission distributions Stevenn Volant,Caroline Bérard,Marie-Laure Martin-Magniette,Stéphane Robin Statistics and Computing, 2014, 24 (4), pp.493-504. ⟨10.1007/s11222-013-9383-7⟩ Article dans une revue hal-04609312v1
The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana Heike Lange,Hélène Zuber,François M. Sement,Johanna Chicher,Lauriane Kuhnet al. PLoS Genetics, 2014, 10 (8), pp.e1004564. ⟨10.1371/journal.pgen.1004564⟩ Article dans une revue hal-01197631v1
Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum. J.C. Pasquet,S. Chaouch,C. Macadré,S. Balzergue,S. Huguetet al. BMC Genomics, 2014, 15, pp.629. ⟨10.1186/1471-2164-15-629⟩ Article dans une revue hal-01063227v1
Widespread anti-sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post-transcriptional control Jean-Marc Celton,Sylvain Gaillard,Maryline Bruneau,Sandra Pelletier,Sebastien Aubourget al. New Phytologist, 2014, 203 (1), pp.287-299. ⟨10.1111/nph.12787⟩ Article dans une revue hal-01209978v1
Genetic variability of berry size in grapevine (Vitis vinifera L.) Cléa Houel,Marie-Laure Magniette,Stéphane D. Nicolas,Thierry Lacombe,Loic Le Cunffet al. Australian Journal of Grape and Wine Research, 2013, 19 (2), pp.208-220. ⟨10.1111/ajgw.12021⟩ Article dans une revue hal-01223540v1
MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple replicates Caroline Berard,Michael Seifert,Tristan Mary-Huard,Marie-Laure Magniette BMC Bioinformatics, 2013, 14, ⟨10.1186/1471-2105-14-271⟩ Article dans une revue hal-01190745v1
SelvarClustMV: Variable selection approach in model-based clustering allowing for missing values Cathy Maugis-Rabusseau,Martin-Magniette Marie-Laure,Pelletier Sandra Journal de la Société Française de Statistique, 2012, 15 (2), pp.21-36 Article dans une revue hal-00972003v1
A Light-Regulated Genetic Module Was Recruited to Carpel Development in Arabidopsis following a Structural Change to SPATULA Matthieu Reymond,Geraldine Brunoud,Aurélie Chauvet,Jaime F. Martinez-Garcia,Marie-Laure Magnietteet al. The Plant cell, 2012, 24 (7), pp.2812 - 2825. ⟨10.1105/tpc.112.097915⟩ Article dans une revue hal-01003413v1
Inférence de réseaux de régulation de gènes au travers de scores étendus dans les réseaux bayésiens Jimmy Vandel,Brigitte Mangin,Matthieu Vignes,Damien Leroux,Olivier Loudetet al. Revue des Sciences et Technologies de l'Information - Série RIA : Revue d'Intelligence Artificielle, 2012, 26 (6), pp.679-708. ⟨10.3166/ria.26.679-708⟩ Article dans une revue istex hal-01197611v1
A gene-phenotype network based on genetic variability for drought responses reveals key physiological processes in controlled and natural environments David Rengel,Sandrine Arribat,Pierre Maury,Marie-Laure Martin-Magniette,Thibault Hourlieret al. PLoS ONE, 2012, 7 (10), pp.e45249. ⟨10.1371/journal.pone.0045249⟩ Article dans une revue hal-02644423v1
Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures Francisco Cubillos,Jennifer Yansouni,Ahmid Khalili,Sandrine Balzergue,Samira Elftiehet al. BMC Genomics, 2012, 13, pp.1-12. ⟨10.1186/1471-2164-13-117⟩ Article dans une revue hal-01189696v1
Variational Bayes approach for model aggregation in unsupervised classification with Markovian dependency Stevenn Volant,Marie-Laure Magniette Martin-Magniette,Stephane S. Robin Computational Statistics and Data Analysis, 2012, 56 (8), pp.2375-2387. ⟨10.1016/j.csda.2012.01.027⟩ Article dans une revue hal-01000046v1
Variable selection in model-based discriminant analysis Cathy Maugis,Gilles Celeux,Marie-Laure Martin-Magniette Journal of Multivariate Analysis, 2011, 102 (10), pp.1374-1387. ⟨10.1016/j.jmva.2011.05.004⟩ Article dans une revue istex hal-00666826v1
Letter to the Editor Gilles Celeux,Marie-Laure Martin-Magniette,Cathy Maugis,Raftery Adrian Journal of the American Statistical Association, 2011, 106, pp.383-383 Article dans une revue hal-00944081v1
Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome Patricia P. Faivre-Rampant,Isabelle Lesur,Clément Boussardon,Frederique Bitton,Marie-Laure Martin-Magnietteet al. BMC Genomics, 2011, 12, 13 p. ⟨10.1186/1471-2164-12-292⟩ Article dans une revue hal-02646702v1
Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome Caroline Berard,Marie-Laure Magniette,Veronique Brunaud,Sebastien Aubourg,Stephane Robin Statistical Applications in Genetics and Molecular Biology, 2011, 10 (1), pp.50. ⟨10.2202/1544-6115.1692⟩ Article dans une revue hal-01190201v1
Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids Ali M. Banaei Moghaddam,François Roudier,Michael Seifert,Caroline Bérard,Marie-Laure Martin-Magnietteet al. The Plant Journal, 2011, 67 (4), pp.691-700. ⟨10.1111/j.1365-313X.2011.04628.x⟩ Article dans une revue hal-02645621v1
Letter to the editor: ''{A} framework for feature selection in clustering Gilles Celeux,Marie-Laure Martin-Magniette,Cathy Maugis,Adrian E. Raftery Journal of the American Statistical Association, 2011, 106 (493), pp.383. ⟨10.1198/jasa.2011.tm10681⟩ Article dans une revue hal-00666845v1
Genomic approach to study floral development genes in Rosa sp. Annick Dubois,Arnaud A. Remay,Olivier Raymond,Sandrine Balzergue,Aurélie Chauvetet al. PLoS ONE, 2011, 6 (12), ⟨10.1371/journal.pone.0028455⟩ Article dans une revue hal-00753396v1
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis François Roudier,Ikhlak Ahmed,Caroline Bérard,Alexis Sarazin,Tristan Mary-Huardet al. The EMBO Journal, 2011, 30 (10), pp.1928-1938. ⟨10.1038/emboj.2011.103⟩ Article dans une revue hal-04383147v1
Brain transcriptional stability upon prion protein-encoding gene invalidation in zygotic or adult mouse Sead Chadi,Rachel Young,Sandrine Le Guillou,Gaëlle Tilly,Frederique Bittonet al. BMC Genomics, 2010, 11, online (july), Non paginé. ⟨10.1186/1471-2164-11-448⟩ Article dans une revue hal-01193445v1
Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes. David Cohen,Marie-Béatrice Bogeat-Triboulot,Emilie Tisserant,Sandrine Balzergue,Marie-Laure Martin-Magnietteet al. BMC Genomics, 2010, 11 (1), pp.630. ⟨10.1186/1471-2164-11-630⟩ Article dans une revue inserm-00663875v1
Transcriptomic Analysis Highlights Time-specific Embryonic Adaptation of Mice to the Lack of PrP Manal Khalife,Rachel Young,Sead Chadi,Sandrine Le Guillou,Lucas Lefevreet al. Prion, 2010, 4 (3), Non spécifié. ⟨10.4161/pri.12773⟩ Article dans une revue hal-03339362v1
Identification of germinal disk region derived genes potentially involved in hen fertility Sébastien Elis,Elisabeth Blesbois,Isabelle Couty,Sandrine Balzergue,Marie-Laure Martin-Magnietteet al. Molecular Reproduction and Development, 2009, 76 (11), pp.1043-1055. ⟨10.1002/mrd.21062⟩ Article dans une revue istex hal-02666532v1
Mélanges gaussiens bidimensionnels pour la comparaison de deux échantillons de chromatine immunoprécipitée Caroline Berard,Marie-Laure Martin-Magniette,Alexandra To,François Roudier,Vincent Colotet al. La revue MODULAD, 2009, 40, pp.53-68 Article dans une revue hal-01197565v1
Sélection de variables pour la classification par mélanges gaussiens pour prédire la fonction des gènes orphelins Cathy Maugis,Marie-Laure Martin-Magniette,Jean-Philippe Tamby,Jean-Pierre Renou,Alain Lecharnyet al. La revue MODULAD, 2009, 40, pp.69-80 Article dans une revue hal-01197529v1
Estimation of the hazard function in a semiparametric model with covariate measurement error Marie-Laure Martin-Magniette,Marie-Luce Taupin ESAIM: Probability and Statistics, 2009, 13, pp.87-114. ⟨10.1051/ps:2008004⟩ Article dans une revue hal-00480192v1
Transcriptome Analysis Describing New Immunity and Defense Genes in Peripheral Blood Mononuclear Cells of Rheumatoid Arthritis Patients Vitor Hugo Teixeira,Robert Olaso,Marie-Laure Magniette,Sandra Lasbleiz,Laurent Jacqet al. PLoS ONE, 2009, 4 (8), pp.e6803. ⟨10.1371/journal.pone.0006803⟩ Article dans une revue hal-01197552v1
ChIPmix: mixture model of regressions for two-color ChIP-chip analysis Marie-Laure Magniette,Tristan Mary-Huard,Caroline Berard,Stephane Robin Bioinformatics, 2008, 24 (16), pp.i181-i186. ⟨10.1093/bioinformatics/btn280⟩ Article dans une revue hal-01197653v1
Differential gene expression of the honey bee Apis mellifera associated with Varroa destructor infection Maria Navajas,Alain Migeon,C. Alaux,Marie-Laure Martin-Magniette,G.E. Robinsonet al. BMC Genomics, 2008, 9, pp.301. ⟨10.1186/1471-2164-9-301⟩ Article dans une revue hal-02659274v1
Normalization for triple-target microarray experiments Marie-Laure Magniette,Julie Aubert,Avner Bar-Hen,Samira Elftieh,Fréderic Magnietteet al. BMC Bioinformatics, 2008, 9, pp.216. ⟨10.1186/1471-2105-9-216⟩ Article dans une revue hal-01197566v1
Transcriptional and Metabolic Adjustments in ADP-Glucose pyrophosphorylase -deficient bt2 Maize kernels Magalie Cossegal,Pierre Chambrier,Sylvie Mbelo,S. Balzergue,Marie-Laure Martin-Magnietteet al. Plant Physiology, 2008, 146 (4), pp.1553-1570. ⟨10.1104/pp.107.112698⟩ Article dans une revue hal-00412597v1
Systemic Signaling of the Plant Nitrogen Status Triggers Specific Transcriptome Responses Depending on the Nitrogen Source in Medicago truncatula. Sandrine Ruffel,Sandra Freixes,Sandrine Balzergue,Pascal Tillard,Christian Jeudyet al. Plant Physiology, 2008, 146 (4), pp.2020-2035. ⟨10.1104/pp.107.115667⟩ Article dans une revue hal-00275798v1
Search for the genes involved in oocyte maturation and early embryo development in the hen Sébastien Elis,Florence Batellier,Isabelle Couty,Sandrine Balzergue,Marie-Laure Martin-Magnietteet al. BMC Genomics, 2008, 9, pp.1-20. ⟨10.1186/1471-2164-9-110⟩ Article dans une revue hal-02666483v1
CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform Séverine Gagnot,Jean-Philippe Tamby,Marie-Laure Magniette,Frederique Bitton,Ludivine Taconnatet al. Nucleic Acids Research, 2008, 36, pp.D986-D990. ⟨10.1093/nar/gkm757⟩ Article dans une revue hal-01203869v1
Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5 Moussa Benhamed,Marie-Laure Martin-Magniette,Ludivine Taconnat,Frederique Bitton,Caroline Servetet al. The Plant Journal, 2008, 56 (3), pp.493-504. ⟨10.1111/j.1365-313X.2008.03606.x⟩ Article dans une revue hal-02659090v1
Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome Sebastien S. Aubourg,Marie-Laure Martin-Magniette,Veronique V. Brunaud,Ludivine Taconnat,Frederique Bittonet al. BMC Genomics, 2007, 8 (401), pp.1-9. ⟨10.1186/1471-2164-8-401⟩ Article dans une revue hal-02668276v1
Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27 Franziska Turck,François Roudier,Sara Farrona,Marie-Laure Martin-Magniette,Elodie Guillaumeet al. PLoS Genetics, 2007, 3 (6), pp.855-866. ⟨10.1371/journal.pgen.0030086⟩ Article dans une revue hal-02663914v1
Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance. Fanny Ramel,Cécile Sulmon,Francisco Cabello-Hurtado,Ludivine Taconnat,Marie-Laure Martin-Magnietteet al. BMC Genomics, 2007, 8, pp.450. ⟨10.1186/1471-2164-8-450⟩ Article dans une revue hal-00264268v1
Genome-wide expression profiling of the host response to root-knot nematode infection in Arabidopsis Fabien Jammes,Philippe Lecomte,Janice de Almeida Engler,Frederique Bitton,Marie-Laure Martin-Magnietteet al. The Plant Journal, 2005, 44 (3), pp.447-458. ⟨10.1111/j.1365-313X.2005.02532.x⟩ Article dans une revue hal-02682347v1
Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis Claire Lurin,Charles Andres,Sebastien Aubourg,M. Bellaoui,Frédérique Bittonet al. The Plant cell, 2004, 16 (7), pp.1-15 Article dans une revue hal-02679636v1

Ouvrages (1)

Intégration de données biologiques. Approches informatiques et statistiques Christine Froidevaux,Martin-Magniette Marie-Laure,Guillem Rigaill ISTE, 2022, 978-1789480306 Ouvrages hal-05175499v1

Chapitre d'ouvrage (2)

Clustering of co-expressed genes Andrea Rau,Marie-Laure Magniette,Cathy Maugis-Rabusseau Model Choice and Model Aggregation, Editions Technip, 372 p., 2017, 9782710811770 Chapitre d'ouvrage hal-02789928v1
Techniques statistique pour l’analyse du transcriptome Stephane Robin,Marie-Laure Magniette Informatique pour l’analyse du transcriptome, Editions Lavoisier, 320 p., 2004 Chapitre d'ouvrage hal-01222881v1

Thèse (1)

Survival data: 1) taking into account the measurement error of the covariate 2) non-parametric estimation of the hazard function by model slection. Application to the Hiroshima data Marie-Laure Martin Life Sciences [q-bio]. 2001. English. ⟨NNT : ⟩ Thèse tel-02832527v1

HDR (1)

Approches statistiques pour l'analyse de données génomiques Marie-Laure Martin-Magniette Life Sciences [q-bio]. Université d'Évry-Val-d'Essonne, 2013 HDR tel-02806029v1