
Marie Simonin
Présentation
Research Scientist at INRAE
42 Rue Georges Morel, 49070 Beaucouzé, France
E-mail: marie.simonin[at]inrae.fr
Research interests
Impact of abiotic and biotic disturbances on microbial activity and diversity
Interactive effects of different agents of global change (contaminants, nutrient pollution, CO2)
Plant-microbiome interactions and microbiome engineering
Resistance and resilience of microbiomes to these disturbances
Education
● Ph.D (2012 –2015):Microbial Ecology Laboratory (University Claude Bernard - Lyon, France) and Laboratory of Transfer in Hydrology and Environment (University Joseph Fourier - Grenoble, France)
Advisors: Pr Agnès Richaume-Jolion and Dr Jean Martins
● MSc. Degree in Ecology, Biodiversity, Evolution (2010–2012): University Pierre & Marie Curie
Paris VI, France. Specialty: Biodiversity and Functioning of Ecosystems – Ecological engineering
● BSc. Degrees(2007 – 2010): University of Caen-Basse Normandie, France
- License of Biology of organisms and License of Geography
Professional experiences
● Research Scientist (Oct 2019 - Present): INRAE - IRHS in EmerSys team (Angers, France) Characterization of seed microbiomes and their resistances to abiotic and biotic stressors.
● Postdoctoral associate (Jan 2019 - Sept 2019):IRD - Interaction Plant - Microorganism - Environment Lab (Montpellier, France) Impact of biotic disturbances and agricultural practices on the plant microbiome of diverse crops in West Africa and South-East Asia.Supervisor: Lionel Moulin
● Postdoctoral associate (2016 - 2018):Biology Department (Duke University, NC, USA)
Impact of anthropogenic disturbances on the diversity and function of microbial communities in aquatic and terrestrial ecosystems.Supervisor: Emily Bernhardt
● Graduate researcher(2012- 2015): Microbial Ecology Laboratory (University Claude Bernard - Lyon) and Laboratory of Transfer in Hydrology and Environment (University Joseph Fourier - Grenoble)
Thesis title: Dynamic, reactivity and ecotoxicity of metal oxide nanoparticles in soil: impact on functions and diversity of microbial communities.Advisors: Pr Agnès Richaume-Jolion and Dr Jean Martins
Articles / Presentations / Posters
● Published articles and Pre-prints
24 articles published in peer-reviewed journal (Rank A)
1 pre-print
Publications
Publications
|
Characterisation of the spermosphere of the common bean seed (Phaseolus vulgaris)Journée annuelle des Jeunes Chercheuses et Chercheurs (JJC) 2023, Apr 2023, Clermont-Ferrand, France
Poster de conférence
hal-04528599
v1
|
|
Single seed microbiota: assembly and transmission from parent plant to seedling2021
Pré-publication, Document de travail
(preprint/prepublication)
hal-03299438
v1
|
|
Asymmetric outcome of community coalescence of seed and soil microbiota during early seedling growth2020
Pré-publication, Document de travail
(preprint/prepublication)
hal-03045727
v1
|
|
Dynamique, réactivité et écotoxicité des nanoparticules d’oxydes métalliques dans les sols : impact sur les fonctions et la diversité des communautés microbiennesEcotoxicologie. Université Claude Bernard - Lyon I, 2015. Français. ⟨NNT : 2015LYO10164⟩
Thèse
tel-01272111
v1
|
|
Pilotage du microbiote des graines pour améliorer la santé des plantesSciences de l'environnement. Université d'Angers, 2023
HDR
tel-04688332
v1
|
|
Le microbiote des plantes - De son rôle dans la survie végétale à son ingénierie pour une agriculture durableÉcole thématique. Lycée Adam de Craponne, Salon-de-provence, France. 2024
Cours
hal-04852994
v1
|